RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 SKIV2LQ15477 1246 aaKnown RBP10.2□□□□□ -0.78
PMS1-202ENST00000374826 PPP1R26Q5T8A7 1209 aaPredicted RBP10.2□□□□□ -0.78
PMS1-202ENST00000374826 LRRN4Q8WUT4 740 aa10.2□□□□□ -0.78
PMS1-202ENST00000374826 FKBPLQ9UIM3 349 aa10.2□□□□□ -0.78
PMS1-202ENST00000374826 ARHGAP9Q9BRR9 750 aa10.19□□□□□ -0.78
PMS1-202ENST00000374826 TTLL8A6PVC2 850 aa10.18□□□□□ -0.78
PMS1-202ENST00000374826 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.18□□□□□ -0.78
PMS1-202ENST00000374826 Q6ZVU0 165 aa10.18□□□□□ -0.78
PMS1-202ENST00000374826 PGPEP1Q9NXJ5 209 aa10.18□□□□□ -0.78
PMS1-202ENST00000374826 CBLBQ13191 982 aa10.17□□□□□ -0.78
PMS1-202ENST00000374826 FBXO31Q5XUX0 539 aaPredicted RBP10.17□□□□□ -0.78
PMS1-202ENST00000374826 PROCA1Q8NCQ7 364 aaPredicted RBP10.17□□□□□ -0.78
PMS1-202ENST00000374826 KCTD15Q96SI1 283 aaPredicted RBP10.17□□□□□ -0.78
PMS1-202ENST00000374826 FIGNL2A6NMB9 653 aa10.16□□□□□ -0.78
PMS1-202ENST00000374826 NR6A1Q15406 480 aa10.16□□□□□ -0.78
PMS1-202ENST00000374826 ZBTB33Q86T24 672 aa10.16□□□□□ -0.78
PMS1-202ENST00000374826 CDV3Q9UKY7 258 aaKnown RBP10.16□□□□□ -0.78
PMS1-202ENST00000374826 PPP2R2DQ66LE6 453 aa10.15□□□□□ -0.78
PMS1-202ENST00000374826 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.15□□□□□ -0.78
PMS1-202ENST00000374826 SPINT1O43278 529 aa10.14□□□□□ -0.79
PMS1-202ENST00000374826 PTSQ03393 145 aa10.14□□□□□ -0.79
PMS1-202ENST00000374826 SH3D19Q5HYK7 790 aa10.14□□□□□ -0.79
PMS1-202ENST00000374826 GPR161Q8N6U8 529 aaKnown RBP10.14□□□□□ -0.79
PMS1-202ENST00000374826 SLC10A4Q96EP9 437 aa10.14□□□□□ -0.79
PMS1-202ENST00000374826 ZC3H4Q9UPT8 1303 aaKnown RBP10.13□□□□□ -0.79
PMS1-202ENST00000374826 PTK2Q05397 1052 aa10.13□□□□□ -0.79
PMS1-202ENST00000374826 DHX9Q08211 1270 aaKnown RBP10.13□□□□□ -0.79
PMS1-202ENST00000374826 OCSTAMPQ9BR26 566 aa10.13□□□□□ -0.79
PMS1-202ENST00000374826 FAM117AQ9C073 453 aa10.11□□□□□ -0.79
PMS1-202ENST00000374826 KDM4CQ9H3R0 1056 aa10.11□□□□□ -0.79
PMS1-202ENST00000374826 ATP1B4Q9UN42 357 aaPredicted RBP10.11□□□□□ -0.79
PMS1-202ENST00000374826 GPSM3Q9Y4H4 160 aa10.11□□□□□ -0.79
PMS1-202ENST00000374826 KRT76Q01546 638 aa10.1□□□□□ -0.79
PMS1-202ENST00000374826 INTS6LQ5JSJ4 861 aaKnown RBP10.1□□□□□ -0.79
PMS1-202ENST00000374826 NANOS1Q8WY41 292 aaKnown RBP10.1□□□□□ -0.79
PMS1-202ENST00000374826 GPBP1L1Q9HC44 474 aaPredicted RBP10.1□□□□□ -0.79
PMS1-202ENST00000374826 AP1G2O75843 785 aa10.09□□□□□ -0.79
PMS1-202ENST00000374826 CCDC155Q8N6L0 562 aa10.09□□□□□ -0.79
PMS1-202ENST00000374826 ADAM32Q8TC27 787 aa10.09□□□□□ -0.79
PMS1-202ENST00000374826 DDRGK1Q96HY6 314 aa10.09□□□□□ -0.79
PMS1-202ENST00000374826 AGBL1Q96MI9 1066 aa10.09□□□□□ -0.79
PMS1-202ENST00000374826 SLC35F4A4IF30 521 aa10.08□□□□□ -0.8
PMS1-202ENST00000374826 CNTNAP3BQ96NU0 1288 aa10.08□□□□□ -0.8
PMS1-202ENST00000374826 CNTNAP3Q9BZ76 1288 aa10.08□□□□□ -0.8
PMS1-202ENST00000374826 CTSOP43234 321 aaPredicted RBP10.07□□□□□ -0.8
PMS1-202ENST00000374826 RELBQ01201 579 aa10.07□□□□□ -0.8
PMS1-202ENST00000374826 KCNMA1Q12791 1236 aa10.07□□□□□ -0.8
PMS1-202ENST00000374826 EPS8L1Q8TE68 723 aa10.07□□□□□ -0.8
PMS1-202ENST00000374826 INSM2Q96T92 566 aaPredicted RBP10.06□□□□□ -0.8
PMS1-202ENST00000374826 COL25A1Q9BXS0 654 aaPredicted RBP10.06□□□□□ -0.8
PMS1-202ENST00000374826 TMPRSS4Q9NRS4 437 aa10.05□□□□□ -0.8
PMS1-202ENST00000374826 NBPF20Q3BBV1 942 aa10.04□□□□□ -0.8
PMS1-202ENST00000374826 PNMA1Q8ND90 353 aa10.04□□□□□ -0.8
PMS1-202ENST00000374826 ZNF395Q9H8N7 513 aaPredicted RBP10.04□□□□□ -0.8
PMS1-202ENST00000374826 GSK3AP49840 483 aa10.03□□□□□ -0.8
PMS1-202ENST00000374826 VWA5B2Q8N398 1253 aa10.03□□□□□ -0.8
PMS1-202ENST00000374826 HMX1Q9NP08 348 aaPredicted RBP10.03□□□□□ -0.8
PMS1-202ENST00000374826 ITGA6P23229 1130 aa10.02□□□□□ -0.81
PMS1-202ENST00000374826 ADD1P35611 737 aaKnown RBP10.02□□□□□ -0.81
PMS1-202ENST00000374826 RNFT1Q5M7Z0 435 aa10.02□□□□□ -0.81
PMS1-202ENST00000374826 DZIP3Q86Y13 1208 aaKnown RBP10.02□□□□□ -0.81
PMS1-202ENST00000374826 ZNF784Q8NCA9 323 aaPredicted RBP10.02□□□□□ -0.81
PMS1-202ENST00000374826 POLMQ9NP87 494 aaPredicted RBP10.02□□□□□ -0.81
PMS1-202ENST00000374826 ADAMTS8Q9UP79 889 aa10.02□□□□□ -0.81
PMS1-202ENST00000374826 LOC100996750A0A140TA64 210 aa10.01□□□□□ -0.81
PMS1-202ENST00000374826 ERVH48-1M5A8F1 160 aa10.01□□□□□ -0.81
PMS1-202ENST00000374826 LILRA1O75019 489 aa10.01□□□□□ -0.81
PMS1-202ENST00000374826 USP17L8P0C7I0 530 aa10.01□□□□□ -0.81
PMS1-202ENST00000374826 RNF217Q8TC41 542 aa10.01□□□□□ -0.81
PMS1-202ENST00000374826 KRTAP4-6Q9BYQ5 205 aa10.01□□□□□ -0.81
PMS1-202ENST00000374826 RAB15P59190 212 aa10□□□□□ -0.81
PMS1-202ENST00000374826 SV2AQ7L0J3 742 aa10□□□□□ -0.81
PMS1-202ENST00000374826 KDF1Q8NAX2 398 aaPredicted RBP10□□□□□ -0.81
PMS1-202ENST00000374826 ESPNB1AK53 854 aa9.99□□□□□ -0.81
PMS1-202ENST00000374826 ADH1AP07327 375 aa9.99□□□□□ -0.81
PMS1-202ENST00000374826 PTGIRP43119 386 aa9.99□□□□□ -0.81
PMS1-202ENST00000374826 SENP3-EIF4A1A0A087X0R7 540 aa9.98□□□□□ -0.81
PMS1-202ENST00000374826 RFC5P40937 340 aa9.98□□□□□ -0.81
PMS1-202ENST00000374826 ZNF385CQ66K41 422 aaPredicted RBP9.98□□□□□ -0.81
PMS1-202ENST00000374826 CDC14CA4D256 554 aa9.97□□□□□ -0.81
PMS1-202ENST00000374826 SLURP2P0DP57 97 aa9.97□□□□□ -0.81
PMS1-202ENST00000374826 KCTD17Q8N5Z5 321 aa9.97□□□□□ -0.81
PMS1-202ENST00000374826 RASSF7Q02833 373 aa9.96□□□□□ -0.82
PMS1-202ENST00000374826 TMEM151AQ8N4L1 468 aa9.96□□□□□ -0.82
PMS1-202ENST00000374826 FOXD4L5Q5VV16 416 aaPredicted RBP9.95□□□□□ -0.82
PMS1-202ENST00000374826 SEPT12Q8IYM1 358 aa9.95□□□□□ -0.82
PMS1-202ENST00000374826 WHAMMQ8TF30 809 aa9.95□□□□□ -0.82
PMS1-202ENST00000374826 TRIM34Q9BYJ4 488 aa9.95□□□□□ -0.82
PMS1-202ENST00000374826 GDF11O95390 407 aa9.94□□□□□ -0.82
PMS1-202ENST00000374826 SVOPQ8N4V2 548 aa9.94□□□□□ -0.82
PMS1-202ENST00000374826 ARHGEF15O94989 841 aa9.93□□□□□ -0.82
PMS1-202ENST00000374826 TPRNQ4KMQ1 711 aa9.93□□□□□ -0.82
PMS1-202ENST00000374826 TMEM259Q4ZIN3 620 aa9.93□□□□□ -0.82
PMS1-202ENST00000374826 LYSMD3Q7Z3D4 306 aa9.93□□□□□ -0.82
PMS1-202ENST00000374826 GOPCQ9HD26 462 aa9.93□□□□□ -0.82
PMS1-202ENST00000374826 RNF144AP50876 292 aaPredicted RBP9.92□□□□□ -0.82
PMS1-202ENST00000374826 TRIM52Q96A61 297 aa9.92□□□□□ -0.82
PMS1-202ENST00000374826 CYLDQ9NQC7 956 aa9.92□□□□□ -0.82
PMS1-202ENST00000374826 RNF225M0QZC1 329 aaPredicted RBP9.91□□□□□ -0.82
PMS1-202ENST00000374826 GIGYF1O75420 1035 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms