RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 ANKRD26Q9UPS8 1709 aa20.69■□□□□ 0.9
PFDN6-202ENST00000374607 SLIT2O94813 1529 aa20.68■□□□□ 0.9
PFDN6-202ENST00000374607 MAP3K19Q56UN5 1328 aa20.68■□□□□ 0.9
PFDN6-202ENST00000374607 NWD2Q9ULI1 1742 aa20.67■□□□□ 0.9
PFDN6-202ENST00000374607 LTN1O94822 1766 aa20.67■□□□□ 0.9
PFDN6-202ENST00000374607 RXRBP28702 533 aa20.67■□□□□ 0.9
PFDN6-202ENST00000374607 BCL9LQ86UU0 1499 aa20.66■□□□□ 0.9
PFDN6-202ENST00000374607 NPC1L1Q9UHC9 1359 aa20.65■□□□□ 0.9
PFDN6-202ENST00000374607 IP6K1Q92551 441 aa20.65■□□□□ 0.9
PFDN6-202ENST00000374607 LTV1Q96GA3 475 aaPredicted RBP20.65■□□□□ 0.9
PFDN6-202ENST00000374607 VPS72Q15906 364 aa20.64■□□□□ 0.89
PFDN6-202ENST00000374607 TOM1L2Q6ZVM7 507 aa20.64■□□□□ 0.89
PFDN6-202ENST00000374607 USP35Q9P2H5 1018 aa20.64■□□□□ 0.89
PFDN6-202ENST00000374607 AXIN2Q9Y2T1 843 aa20.64■□□□□ 0.89
PFDN6-202ENST00000374607 EMILIN1Q9Y6C2 1016 aa20.64■□□□□ 0.89
PFDN6-202ENST00000374607 HOXC9P31274 260 aa20.63■□□□□ 0.89
PFDN6-202ENST00000374607 CAMTA1Q9Y6Y1 1673 aa20.63■□□□□ 0.89
PFDN6-202ENST00000374607 RTL1A6NKG5 1358 aa20.62■□□□□ 0.89
PFDN6-202ENST00000374607 A0A0G2JS52 829 aa20.62■□□□□ 0.89
PFDN6-202ENST00000374607 RBM6P78332 1123 aaKnown RBP20.62■□□□□ 0.89
PFDN6-202ENST00000374607 MYT1Q01538 1121 aa20.62■□□□□ 0.89
PFDN6-202ENST00000374607 ANKRD24Q8TF21 1146 aa20.62■□□□□ 0.89
PFDN6-202ENST00000374607 GJD4Q96KN9 370 aaPredicted RBP20.62■□□□□ 0.89
PFDN6-202ENST00000374607 BLMP54132 1417 aaPredicted RBP20.61■□□□□ 0.89
PFDN6-202ENST00000374607 SMG6Q86US8 1419 aaKnown RBP20.61■□□□□ 0.89
PFDN6-202ENST00000374607 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.61■□□□□ 0.89
PFDN6-202ENST00000374607 FLT4P35916 1363 aa20.61■□□□□ 0.89
PFDN6-202ENST00000374607 LARP1Q6PKG0 1096 aaKnown RBP20.61■□□□□ 0.89
PFDN6-202ENST00000374607 POLKQ9UBT6 870 aa20.61■□□□□ 0.89
PFDN6-202ENST00000374607 ABCC6O95255 1503 aa20.61■□□□□ 0.89
PFDN6-202ENST00000374607 COL5A2P05997 1499 aaPredicted RBP20.61■□□□□ 0.89
PFDN6-202ENST00000374607 ATRNO75882 1429 aa20.61■□□□□ 0.89
PFDN6-202ENST00000374607 LMO7Q8WWI1 1683 aa20.61■□□□□ 0.89
PFDN6-202ENST00000374607 NLRP2Q9NX02 1062 aa20.6■□□□□ 0.89
PFDN6-202ENST00000374607 MAP2P11137 1827 aaKnown RBP20.6■□□□□ 0.89
PFDN6-202ENST00000374607 KIF24Q5T7B8 1368 aa20.59■□□□□ 0.89
PFDN6-202ENST00000374607 NRAPQ86VF7 1730 aa20.59■□□□□ 0.89
PFDN6-202ENST00000374607 CDK12Q9NYV4 1490 aaPredicted RBP20.59■□□□□ 0.89
PFDN6-202ENST00000374607 COL18A1P39060 1754 aa20.59■□□□□ 0.89
PFDN6-202ENST00000374607 RGPD5Q99666 1765 aa20.59■□□□□ 0.89
PFDN6-202ENST00000374607 WDR17Q8IZU2 1322 aa20.58■□□□□ 0.89
PFDN6-202ENST00000374607 HSP90AB2PQ58FF8 381 aa20.58■□□□□ 0.89
PFDN6-202ENST00000374607 CRB1P82279 1406 aa20.57■□□□□ 0.88
PFDN6-202ENST00000374607 ERBB3P21860 1342 aa20.56■□□□□ 0.88
PFDN6-202ENST00000374607 SPATA31A5Q5VU36 1347 aa20.56■□□□□ 0.88
PFDN6-202ENST00000374607 SPATA31A7Q8IWB4 1347 aa20.56■□□□□ 0.88
PFDN6-202ENST00000374607 MTHFSP49914 203 aa20.56■□□□□ 0.88
PFDN6-202ENST00000374607 RALBP1Q15311 655 aa20.55■□□□□ 0.88
PFDN6-202ENST00000374607 FAM98CQ17RN3 349 aaKnown RBP20.55■□□□□ 0.88
PFDN6-202ENST00000374607 TCP11L2Q8N4U5 519 aa20.55■□□□□ 0.88
PFDN6-202ENST00000374607 INSRP06213 1382 aa20.55■□□□□ 0.88
PFDN6-202ENST00000374607 SPATA31A1Q5TZJ5 1347 aa20.54■□□□□ 0.88
PFDN6-202ENST00000374607 CFAP53Q96M91 514 aa20.54■□□□□ 0.88
PFDN6-202ENST00000374607 CARD10Q9BWT7 1032 aa20.53■□□□□ 0.88
PFDN6-202ENST00000374607 THRAP3Q9Y2W1 955 aaKnown RBP20.53■□□□□ 0.88
PFDN6-202ENST00000374607 RGS12O14924 1447 aa20.53■□□□□ 0.88
PFDN6-202ENST00000374607 PEAK1Q9H792 1746 aa20.52■□□□□ 0.88
PFDN6-202ENST00000374607 PPP2R1AP30153 589 aa20.51■□□□□ 0.87
PFDN6-202ENST00000374607 ANP32CO43423 234 aa20.5■□□□□ 0.87
PFDN6-202ENST00000374607 PARD3Q8TEW0 1356 aa20.49■□□□□ 0.87
PFDN6-202ENST00000374607 SEPT12Q8IYM1 358 aa20.49■□□□□ 0.87
PFDN6-202ENST00000374607 GLI3P10071 1580 aa20.49■□□□□ 0.87
PFDN6-202ENST00000374607 EIF4A2Q14240 407 aaKnown RBP20.48■□□□□ 0.87
PFDN6-202ENST00000374607 BARGINQ6ZT62 677 aa20.48■□□□□ 0.87
PFDN6-202ENST00000374607 FAM208AQ9UK61 1670 aaKnown RBP20.48■□□□□ 0.87
PFDN6-202ENST00000374607 DIAPH1O60610 1272 aaKnown RBP20.47■□□□□ 0.87
PFDN6-202ENST00000374607 USHBP1Q8N6Y0 703 aa20.47■□□□□ 0.87
PFDN6-202ENST00000374607 CDCA7Q9BWT1 371 aaPredicted RBP20.47■□□□□ 0.87
PFDN6-202ENST00000374607 NBPF6Q5VWK0 638 aa20.46■□□□□ 0.87
PFDN6-202ENST00000374607 NBPF4Q96M43 638 aa20.46■□□□□ 0.87
PFDN6-202ENST00000374607 IL2RBP14784 551 aa20.45■□□□□ 0.86
PFDN6-202ENST00000374607 RAPGEF4Q8WZA2 1011 aa20.45■□□□□ 0.86
PFDN6-202ENST00000374607 PRKRIP1Q9H875 184 aaPredicted RBP20.45■□□□□ 0.86
PFDN6-202ENST00000374607 MYBBP1AQ9BQG0 1328 aaKnown RBP20.45■□□□□ 0.86
PFDN6-202ENST00000374607 PDE3BQ13370 1112 aa20.44■□□□□ 0.86
PFDN6-202ENST00000374607 UPF1Q92900 1129 aaKnown RBP eCLIP20.44■□□□□ 0.86
PFDN6-202ENST00000374607 NUDCQ9Y266 331 aa20.44■□□□□ 0.86
PFDN6-202ENST00000374607 U2SURPO15042 1029 aaKnown RBP20.43■□□□□ 0.86
PFDN6-202ENST00000374607 ONECUT3O60422 494 aaPredicted RBP20.43■□□□□ 0.86
PFDN6-202ENST00000374607 DDB1Q16531 1140 aa20.43■□□□□ 0.86
PFDN6-202ENST00000374607 EYA1Q99502 592 aa20.43■□□□□ 0.86
PFDN6-202ENST00000374607 EXOC5O00471 708 aa20.42■□□□□ 0.86
PFDN6-202ENST00000374607 TATP17735 454 aaPredicted RBP20.42■□□□□ 0.86
PFDN6-202ENST00000374607 RGPD2P0DJD1 1756 aa20.41■□□□□ 0.86
PFDN6-202ENST00000374607 KRT27Q7Z3Y8 459 aa20.41■□□□□ 0.86
PFDN6-202ENST00000374607 IL13P35225 146 aa20.4■□□□□ 0.86
PFDN6-202ENST00000374607 SULT6B1Q6IMI4 303 aa20.38■□□□□ 0.85
PFDN6-202ENST00000374607 IGSF1Q8N6C5 1336 aa20.36■□□□□ 0.85
PFDN6-202ENST00000374607 THSD7AQ9UPZ6 1657 aa20.35■□□□□ 0.85
PFDN6-202ENST00000374607 WNK3Q9BYP7 1800 aa20.35■□□□□ 0.85
PFDN6-202ENST00000374607 HMOX1P09601 288 aa20.35■□□□□ 0.85
PFDN6-202ENST00000374607 U2AF1L5P0DN76 240 aaPredicted RBP20.35■□□□□ 0.85
PFDN6-202ENST00000374607 U2AF1Q01081 240 aaKnown RBP eCLIP20.35■□□□□ 0.85
PFDN6-202ENST00000374607 DDX54Q8TDD1 881 aaKnown RBP20.35■□□□□ 0.85
PFDN6-202ENST00000374607 ZCRB1Q8TBF4 217 aaKnown RBP20.34■□□□□ 0.85
PFDN6-202ENST00000374607 SPG7Q9UQ90 795 aa20.34■□□□□ 0.85
PFDN6-202ENST00000374607 PARP4Q9UKK3 1724 aaKnown RBP20.33■□□□□ 0.85
PFDN6-202ENST00000374607 DIEXFQ68CQ4 756 aaKnown RBP20.33■□□□□ 0.85
PFDN6-202ENST00000374607 DISP2A7MBM2 1401 aa20.33■□□□□ 0.84
PFDN6-202ENST00000374607 BRWD3Q6RI45 1802 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms