RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 SPATA31A7Q8IWB4 1347 aa21.88■■□□□ 1.09
HDHD3-202ENST00000374180 NRAPQ86VF7 1730 aa21.87■■□□□ 1.09
HDHD3-202ENST00000374180 PER1O15534 1290 aaPredicted RBP21.87■■□□□ 1.09
HDHD3-202ENST00000374180 MAP3K19Q56UN5 1328 aa21.87■■□□□ 1.09
HDHD3-202ENST00000374180 AMPHP49418 695 aa21.86■■□□□ 1.09
HDHD3-202ENST00000374180 RRS1Q15050 365 aaKnown RBP21.86■■□□□ 1.09
HDHD3-202ENST00000374180 COL5A2P05997 1499 aaPredicted RBP21.86■■□□□ 1.09
HDHD3-202ENST00000374180 CDK12Q9NYV4 1490 aaPredicted RBP21.86■■□□□ 1.09
HDHD3-202ENST00000374180 IP6K1Q92551 441 aa21.85■■□□□ 1.09
HDHD3-202ENST00000374180 USP35Q9P2H5 1018 aa21.85■■□□□ 1.09
HDHD3-202ENST00000374180 NSD2O96028 1365 aa21.85■■□□□ 1.09
HDHD3-202ENST00000374180 COL18A1P39060 1754 aa21.84■■□□□ 1.09
HDHD3-202ENST00000374180 AMER1Q5JTC6 1135 aaPredicted RBP21.84■■□□□ 1.09
HDHD3-202ENST00000374180 SPATA31A1Q5TZJ5 1347 aa21.84■■□□□ 1.09
HDHD3-202ENST00000374180 CSB-PGBD3P0DP91 1061 aa21.83■■□□□ 1.09
HDHD3-202ENST00000374180 TNNT2P45379 298 aaPredicted RBP21.83■■□□□ 1.09
HDHD3-202ENST00000374180 TOM1L2Q6ZVM7 507 aa21.83■■□□□ 1.09
HDHD3-202ENST00000374180 FAM98CQ17RN3 349 aaKnown RBP21.83■■□□□ 1.08
HDHD3-202ENST00000374180 MORC1Q86VD1 984 aa21.83■■□□□ 1.08
HDHD3-202ENST00000374180 WDR17Q8IZU2 1322 aa21.83■■□□□ 1.08
HDHD3-202ENST00000374180 GLI3P10071 1580 aa21.83■■□□□ 1.08
HDHD3-202ENST00000374180 RGS12O14924 1447 aa21.82■■□□□ 1.08
HDHD3-202ENST00000374180 ONECUT3O60422 494 aaPredicted RBP21.82■■□□□ 1.08
HDHD3-202ENST00000374180 LTN1O94822 1766 aa21.81■■□□□ 1.08
HDHD3-202ENST00000374180 ABCC6O95255 1503 aa21.81■■□□□ 1.08
HDHD3-202ENST00000374180 A0A0G2JS52 829 aa21.81■■□□□ 1.08
HDHD3-202ENST00000374180 HOXC9P31274 260 aa21.81■■□□□ 1.08
HDHD3-202ENST00000374180 MYT1Q01538 1121 aa21.81■■□□□ 1.08
HDHD3-202ENST00000374180 CRB1P82279 1406 aa21.8■■□□□ 1.08
HDHD3-202ENST00000374180 SEPT12Q8IYM1 358 aa21.8■■□□□ 1.08
HDHD3-202ENST00000374180 TCP11L2Q8N4U5 519 aa21.8■■□□□ 1.08
HDHD3-202ENST00000374180 ANKRD24Q8TF21 1146 aa21.8■■□□□ 1.08
HDHD3-202ENST00000374180 PPM1GO15355 546 aaPredicted RBP21.79■■□□□ 1.08
HDHD3-202ENST00000374180 BLMP54132 1417 aaPredicted RBP21.79■■□□□ 1.08
HDHD3-202ENST00000374180 ERBB3P21860 1342 aa21.78■■□□□ 1.08
HDHD3-202ENST00000374180 CC2D1BQ5T0F9 858 aaKnown RBP21.78■■□□□ 1.08
HDHD3-202ENST00000374180 LTV1Q96GA3 475 aaPredicted RBP21.78■■□□□ 1.08
HDHD3-202ENST00000374180 THRAP3Q9Y2W1 955 aaKnown RBP21.78■■□□□ 1.08
HDHD3-202ENST00000374180 EMILIN1Q9Y6C2 1016 aa21.78■■□□□ 1.08
HDHD3-202ENST00000374180 RGPD5Q99666 1765 aa21.78■■□□□ 1.08
HDHD3-202ENST00000374180 RTL1A6NKG5 1358 aa21.78■■□□□ 1.08
HDHD3-202ENST00000374180 CARD10Q9BWT7 1032 aa21.77■■□□□ 1.08
HDHD3-202ENST00000374180 CNGB1Q14028 1251 aaPredicted RBP21.77■■□□□ 1.07
HDHD3-202ENST00000374180 BARGINQ6ZT62 677 aa21.77■■□□□ 1.07
HDHD3-202ENST00000374180 NLRP2Q9NX02 1062 aa21.77■■□□□ 1.07
HDHD3-202ENST00000374180 POLKQ9UBT6 870 aa21.77■■□□□ 1.07
HDHD3-202ENST00000374180 KIF24Q5T7B8 1368 aa21.76■■□□□ 1.07
HDHD3-202ENST00000374180 HSP90AB2PQ58FF8 381 aa21.76■■□□□ 1.07
HDHD3-202ENST00000374180 SOCS7O14512 581 aa21.75■■□□□ 1.07
HDHD3-202ENST00000374180 ANKRD26Q9UPS8 1709 aa21.75■■□□□ 1.07
HDHD3-202ENST00000374180 FLT4P35916 1363 aa21.75■■□□□ 1.07
HDHD3-202ENST00000374180 NPC1L1Q9UHC9 1359 aa21.75■■□□□ 1.07
HDHD3-202ENST00000374180 DDX10Q13206 875 aaKnown RBP21.73■■□□□ 1.07
HDHD3-202ENST00000374180 INSRP06213 1382 aa21.73■■□□□ 1.07
HDHD3-202ENST00000374180 KRT27Q7Z3Y8 459 aa21.71■■□□□ 1.07
HDHD3-202ENST00000374180 MAP2P11137 1827 aaKnown RBP21.7■■□□□ 1.07
HDHD3-202ENST00000374180 SMG6Q86US8 1419 aaKnown RBP21.69■■□□□ 1.06
HDHD3-202ENST00000374180 CDCA7Q9BWT1 371 aaPredicted RBP21.69■■□□□ 1.06
HDHD3-202ENST00000374180 PEAK1Q9H792 1746 aa21.68■■□□□ 1.06
HDHD3-202ENST00000374180 ZNF316A6NFI3 1004 aaPredicted RBP21.68■■□□□ 1.06
HDHD3-202ENST00000374180 PDE3BQ13370 1112 aa21.67■■□□□ 1.06
HDHD3-202ENST00000374180 NBPF6Q5VWK0 638 aa21.66■■□□□ 1.06
HDHD3-202ENST00000374180 NBPF4Q96M43 638 aa21.66■■□□□ 1.06
HDHD3-202ENST00000374180 EP400Q96L91 3159 aa21.66■■□□□ 1.06
HDHD3-202ENST00000374180 THSD7AQ9UPZ6 1657 aa21.65■■□□□ 1.06
HDHD3-202ENST00000374180 IL2RBP14784 551 aa21.64■■□□□ 1.06
HDHD3-202ENST00000374180 MTHFSP49914 203 aa21.64■■□□□ 1.06
HDHD3-202ENST00000374180 DDB1Q16531 1140 aa21.64■■□□□ 1.06
HDHD3-202ENST00000374180 BRWD3Q6RI45 1802 aa21.63■■□□□ 1.05
HDHD3-202ENST00000374180 EXOC5O00471 708 aa21.63■■□□□ 1.05
HDHD3-202ENST00000374180 EIF4A2Q14240 407 aaKnown RBP21.63■■□□□ 1.05
HDHD3-202ENST00000374180 FAM182BQ5T319 152 aa21.62■■□□□ 1.05
HDHD3-202ENST00000374180 USHBP1Q8N6Y0 703 aa21.62■■□□□ 1.05
HDHD3-202ENST00000374180 DISP2A7MBM2 1401 aa21.61■■□□□ 1.05
HDHD3-202ENST00000374180 FAM208AQ9UK61 1670 aaKnown RBP21.61■■□□□ 1.05
HDHD3-202ENST00000374180 UPF1Q92900 1129 aaKnown RBP eCLIP21.6■■□□□ 1.05
HDHD3-202ENST00000374180 EYA1Q99502 592 aa21.59■■□□□ 1.05
HDHD3-202ENST00000374180 RAPGEF4Q8WZA2 1011 aa21.58■■□□□ 1.05
HDHD3-202ENST00000374180 PARP4Q9UKK3 1724 aaKnown RBP21.58■■□□□ 1.04
HDHD3-202ENST00000374180 RGPD2P0DJD1 1756 aa21.57■■□□□ 1.04
HDHD3-202ENST00000374180 FAM196AQ6ZSG2 479 aa21.57■■□□□ 1.04
HDHD3-202ENST00000374180 PPP2R1AP30153 589 aa21.56■■□□□ 1.04
HDHD3-202ENST00000374180 TATP17735 454 aaPredicted RBP21.55■■□□□ 1.04
HDHD3-202ENST00000374180 MARCH10Q8NA82 808 aaPredicted RBP21.55■■□□□ 1.04
HDHD3-202ENST00000374180 IL13P35225 146 aa21.54■■□□□ 1.04
HDHD3-202ENST00000374180 WNK3Q9BYP7 1800 aa21.54■■□□□ 1.04
HDHD3-202ENST00000374180 CCDC125Q86Z20 511 aa21.53■■□□□ 1.04
HDHD3-202ENST00000374180 ZCRB1Q8TBF4 217 aaKnown RBP21.53■■□□□ 1.04
HDHD3-202ENST00000374180 LRRC37A3O60309 1634 aa21.53■■□□□ 1.04
HDHD3-202ENST00000374180 TNS2Q63HR2 1409 aa21.52■■□□□ 1.04
HDHD3-202ENST00000374180 DIAPH1O60610 1272 aaKnown RBP21.52■■□□□ 1.04
HDHD3-202ENST00000374180 RALBP1Q15311 655 aa21.52■■□□□ 1.04
HDHD3-202ENST00000374180 CFAP53Q96M91 514 aa21.52■■□□□ 1.04
HDHD3-202ENST00000374180 PARD3Q8TEW0 1356 aa21.52■■□□□ 1.04
HDHD3-202ENST00000374180 IGSF1Q8N6C5 1336 aa21.52■■□□□ 1.04
HDHD3-202ENST00000374180 DDX54Q8TDD1 881 aaKnown RBP21.52■■□□□ 1.03
HDHD3-202ENST00000374180 MEGF6O75095 1541 aa21.51■■□□□ 1.03
HDHD3-202ENST00000374180 OVOS2A0A0G2JMS6 1433 aa21.5■■□□□ 1.03
HDHD3-202ENST00000374180 NCAPD2Q15021 1401 aa21.5■■□□□ 1.03
HDHD3-202ENST00000374180 SF3B2Q13435 895 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms