RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 DIAPH1O60610 1272 aaKnown RBP23.48■■□□□ 1.35
C9orf43-202ENST00000374165 HAP1P54257 671 aaPredicted RBP23.48■■□□□ 1.35
C9orf43-202ENST00000374165 IL13P35225 146 aa23.47■■□□□ 1.35
C9orf43-202ENST00000374165 IP6K1Q92551 441 aa23.47■■□□□ 1.35
C9orf43-202ENST00000374165 EIF4A2Q14240 407 aaKnown RBP23.47■■□□□ 1.35
C9orf43-202ENST00000374165 COL18A1P39060 1754 aa23.45■■□□□ 1.35
C9orf43-202ENST00000374165 SENP3-EIF4A1A0A087X0R7 540 aa23.45■■□□□ 1.34
C9orf43-202ENST00000374165 CPDO75976 1380 aa23.45■■□□□ 1.34
C9orf43-202ENST00000374165 KIF24Q5T7B8 1368 aa23.45■■□□□ 1.34
C9orf43-202ENST00000374165 WDR43Q15061 677 aaKnown RBP eCLIP23.44■■□□□ 1.34
C9orf43-202ENST00000374165 LTV1Q96GA3 475 aaPredicted RBP23.44■■□□□ 1.34
C9orf43-202ENST00000374165 U2SURPO15042 1029 aaKnown RBP23.43■■□□□ 1.34
C9orf43-202ENST00000374165 RTL1A6NKG5 1358 aa23.43■■□□□ 1.34
C9orf43-202ENST00000374165 FAM83GA6ND36 823 aa23.42■■□□□ 1.34
C9orf43-202ENST00000374165 PRDM11Q9NQV5 511 aa23.42■■□□□ 1.34
C9orf43-202ENST00000374165 NUTM2BA6NNL0 878 aaPredicted RBP23.42■■□□□ 1.34
C9orf43-202ENST00000374165 NUTM2EB1AL46 878 aaPredicted RBP23.42■■□□□ 1.34
C9orf43-202ENST00000374165 U2AF1L5P0DN76 240 aaPredicted RBP23.42■■□□□ 1.34
C9orf43-202ENST00000374165 U2AF1Q01081 240 aaKnown RBP eCLIP23.42■■□□□ 1.34
C9orf43-202ENST00000374165 NUTM2AQ8IVF1 878 aaPredicted RBP23.42■■□□□ 1.34
C9orf43-202ENST00000374165 JCADQ9P266 1359 aa23.41■■□□□ 1.34
C9orf43-202ENST00000374165 ADAMTS2O95450 1211 aa23.4■■□□□ 1.34
C9orf43-202ENST00000374165 NUDCQ9Y266 331 aa23.4■■□□□ 1.34
C9orf43-202ENST00000374165 RGPD2P0DJD1 1756 aa23.4■■□□□ 1.34
C9orf43-202ENST00000374165 HMOX1P09601 288 aa23.38■■□□□ 1.33
C9orf43-202ENST00000374165 CCDC146Q8IYE0 955 aa23.38■■□□□ 1.33
C9orf43-202ENST00000374165 CAMTA1Q9Y6Y1 1673 aa23.38■■□□□ 1.33
C9orf43-202ENST00000374165 RGPD1P0DJD0 1748 aa23.38■■□□□ 1.33
C9orf43-202ENST00000374165 EYA1Q99502 592 aa23.37■■□□□ 1.33
C9orf43-202ENST00000374165 LMO7Q8WWI1 1683 aa23.37■■□□□ 1.33
C9orf43-202ENST00000374165 AEBP1Q8IUX7 1158 aa23.37■■□□□ 1.33
C9orf43-202ENST00000374165 ANKRD24Q8TF21 1146 aa23.37■■□□□ 1.33
C9orf43-202ENST00000374165 BLMP54132 1417 aaPredicted RBP23.36■■□□□ 1.33
C9orf43-202ENST00000374165 ERBB3P21860 1342 aa23.36■■□□□ 1.33
C9orf43-202ENST00000374165 NBPF6Q5VWK0 638 aa23.35■■□□□ 1.33
C9orf43-202ENST00000374165 NBPF4Q96M43 638 aa23.35■■□□□ 1.33
C9orf43-202ENST00000374165 GTF3C3Q9Y5Q9 886 aa23.34■■□□□ 1.33
C9orf43-202ENST00000374165 SULT6B1Q6IMI4 303 aa23.33■■□□□ 1.33
C9orf43-202ENST00000374165 USHBP1Q8N6Y0 703 aa23.33■■□□□ 1.33
C9orf43-202ENST00000374165 RSPH6AQ9H0K4 717 aa23.32■■□□□ 1.32
C9orf43-202ENST00000374165 IGSF1Q8N6C5 1336 aa23.32■■□□□ 1.32
C9orf43-202ENST00000374165 LRP6O75581 1613 aa23.32■■□□□ 1.32
C9orf43-202ENST00000374165 PLEKHF1Q96S99 279 aa23.32■■□□□ 1.32
C9orf43-202ENST00000374165 BTG4Q9NY30 223 aa23.32■■□□□ 1.32
C9orf43-202ENST00000374165 ABCC6O95255 1503 aa23.31■■□□□ 1.32
C9orf43-202ENST00000374165 HNRNPUQ00839 825 aaKnown RBP eCLIP23.31■■□□□ 1.32
C9orf43-202ENST00000374165 COL5A2P05997 1499 aaPredicted RBP23.3■■□□□ 1.32
C9orf43-202ENST00000374165 COL14A1Q05707 1796 aaKnown RBP23.3■■□□□ 1.32
C9orf43-202ENST00000374165 FCHSD2O94868 740 aa23.3■■□□□ 1.32
C9orf43-202ENST00000374165 SPATA31A6Q5VVP1 1343 aa23.3■■□□□ 1.32
C9orf43-202ENST00000374165 PRKAR2BP31323 418 aa23.29■■□□□ 1.32
C9orf43-202ENST00000374165 FBXO41Q8TF61 875 aa23.29■■□□□ 1.32
C9orf43-202ENST00000374165 PHACTR3Q96KR7 559 aa23.28■■□□□ 1.32
C9orf43-202ENST00000374165 STRN4Q9NRL3 753 aa23.28■■□□□ 1.32
C9orf43-202ENST00000374165 APAF1O14727 1248 aa23.27■■□□□ 1.32
C9orf43-202ENST00000374165 SALL2Q9Y467 1007 aaPredicted RBP23.27■■□□□ 1.32
C9orf43-202ENST00000374165 KDRP35968 1356 aa23.27■■□□□ 1.32
C9orf43-202ENST00000374165 CSB-PGBD3P0DP91 1061 aa23.26■■□□□ 1.31
C9orf43-202ENST00000374165 NLRP2Q9NX02 1062 aa23.26■■□□□ 1.31
C9orf43-202ENST00000374165 PLCH1Q4KWH8 1693 aa23.26■■□□□ 1.31
C9orf43-202ENST00000374165 LARP1Q6PKG0 1096 aaKnown RBP23.26■■□□□ 1.31
C9orf43-202ENST00000374165 RUNDC1Q96C34 613 aa23.26■■□□□ 1.31
C9orf43-202ENST00000374165 WDR17Q8IZU2 1322 aa23.25■■□□□ 1.31
C9orf43-202ENST00000374165 C8orf37Q96NL8 207 aa23.25■■□□□ 1.31
C9orf43-202ENST00000374165 EVA1CP58658 441 aa23.24■■□□□ 1.31
C9orf43-202ENST00000374165 TCP11L2Q8N4U5 519 aa23.24■■□□□ 1.31
C9orf43-202ENST00000374165 RRP7AQ9Y3A4 280 aaKnown RBP23.23■■□□□ 1.31
C9orf43-202ENST00000374165 TOM1L2Q6ZVM7 507 aa23.22■■□□□ 1.31
C9orf43-202ENST00000374165 FAM208AQ9UK61 1670 aaKnown RBP23.22■■□□□ 1.31
C9orf43-202ENST00000374165 NCAPD2Q15021 1401 aa23.22■■□□□ 1.31
C9orf43-202ENST00000374165 NEUROD2Q15784 382 aa23.21■■□□□ 1.31
C9orf43-202ENST00000374165 NGLY1Q96IV0 654 aa23.21■■□□□ 1.31
C9orf43-202ENST00000374165 SLIT2O94813 1529 aa23.21■■□□□ 1.31
C9orf43-202ENST00000374165 USP35Q9P2H5 1018 aa23.2■■□□□ 1.3
C9orf43-202ENST00000374165 NRAPQ86VF7 1730 aa23.19■■□□□ 1.3
C9orf43-202ENST00000374165 MAPK8IP3Q9UPT6 1336 aa23.18■■□□□ 1.3
C9orf43-202ENST00000374165 PNNQ9H307 717 aaKnown RBP23.18■■□□□ 1.3
C9orf43-202ENST00000374165 BCL9LQ86UU0 1499 aa23.17■■□□□ 1.3
C9orf43-202ENST00000374165 NWD2Q9ULI1 1742 aa23.17■■□□□ 1.3
C9orf43-202ENST00000374165 TMPOP42166 694 aaKnown RBP23.17■■□□□ 1.3
C9orf43-202ENST00000374165 FNBP4Q8N3X1 1017 aaPredicted RBP23.16■■□□□ 1.3
C9orf43-202ENST00000374165 CRB1P82279 1406 aa23.16■■□□□ 1.3
C9orf43-202ENST00000374165 MEX3CQ5U5Q3 659 aaKnown RBP23.16■■□□□ 1.3
C9orf43-202ENST00000374165 CARD10Q9BWT7 1032 aa23.16■■□□□ 1.3
C9orf43-202ENST00000374165 DLG5Q8TDM6 1919 aa23.16■■□□□ 1.3
C9orf43-202ENST00000374165 MTHFSDQ2M296 383 aaKnown RBP23.15■■□□□ 1.3
C9orf43-202ENST00000374165 MEGF6O75095 1541 aa23.14■■□□□ 1.3
C9orf43-202ENST00000374165 UNC5CLQ8IV45 518 aa23.13■■□□□ 1.29
C9orf43-202ENST00000374165 ZBED9Q6R2W3 1325 aa23.13■■□□□ 1.29
C9orf43-202ENST00000374165 RIPK4P57078 832 aa23.13■■□□□ 1.29
C9orf43-202ENST00000374165 NEFMP07197 916 aa23.12■■□□□ 1.29
C9orf43-202ENST00000374165 NFE2L2Q16236 605 aa23.11■■□□□ 1.29
C9orf43-202ENST00000374165 USP21Q9UK80 565 aa23.11■■□□□ 1.29
C9orf43-202ENST00000374165 TRIM35Q9UPQ4 493 aa23.11■■□□□ 1.29
C9orf43-202ENST00000374165 RAPGEF4Q8WZA2 1011 aa23.11■■□□□ 1.29
C9orf43-202ENST00000374165 AFF2P51816 1311 aa23.1■■□□□ 1.29
C9orf43-202ENST00000374165 ZNF521Q96K83 1311 aa23.1■■□□□ 1.29
C9orf43-202ENST00000374165 WWC1Q8IX03 1113 aa23.09■■□□□ 1.29
C9orf43-202ENST00000374165 PHF23Q9BUL5 403 aaPredicted RBP23.09■■□□□ 1.29
C9orf43-202ENST00000374165 SPATA31A1Q5TZJ5 1347 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms