RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 PAK3O75914 559 aaPredicted RBP17.34■□□□□ 0.37
CHCHD1-202ENST00000372837 PRAM1Q96QH2 718 aa17.32■□□□□ 0.36
CHCHD1-202ENST00000372837 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
CHCHD1-202ENST00000372837 THRAP3Q9Y2W1 955 aaKnown RBP17.32■□□□□ 0.36
CHCHD1-202ENST00000372837 PARP4Q9UKK3 1724 aaKnown RBP17.32■□□□□ 0.36
CHCHD1-202ENST00000372837 PIK3C2GO75747 1445 aa17.31■□□□□ 0.36
CHCHD1-202ENST00000372837 PRR36Q9H6K5 1346 aa17.31■□□□□ 0.36
CHCHD1-202ENST00000372837 MSH5O43196 834 aa17.31■□□□□ 0.36
CHCHD1-202ENST00000372837 TXNRD1Q16881 649 aa17.31■□□□□ 0.36
CHCHD1-202ENST00000372837 L3MBTL2Q969R5 705 aa17.31■□□□□ 0.36
CHCHD1-202ENST00000372837 SBF2Q86WG5 1849 aa17.31■□□□□ 0.36
CHCHD1-202ENST00000372837 CCDC7Q96M83 1385 aa17.29■□□□□ 0.36
CHCHD1-202ENST00000372837 HNRNPUQ00839 825 aaKnown RBP eCLIP17.29■□□□□ 0.36
CHCHD1-202ENST00000372837 RGL3Q3MIN7 710 aa17.29■□□□□ 0.36
CHCHD1-202ENST00000372837 HIRIP3Q9BW71 556 aaPredicted RBP17.29■□□□□ 0.36
CHCHD1-202ENST00000372837 PHRF1Q9P1Y6 1649 aaKnown RBP17.29■□□□□ 0.36
CHCHD1-202ENST00000372837 WASHC2AQ641Q2 1341 aa17.28■□□□□ 0.36
CHCHD1-202ENST00000372837 ATP7BP35670 1465 aa17.28■□□□□ 0.36
CHCHD1-202ENST00000372837 ATP10DQ9P241 1426 aa17.28■□□□□ 0.36
CHCHD1-202ENST00000372837 NGDNQ8NEJ9 315 aaKnown RBP17.27■□□□□ 0.36
CHCHD1-202ENST00000372837 CAPN15O75808 1086 aa17.26■□□□□ 0.35
CHCHD1-202ENST00000372837 NUTM2GQ5VZR2 741 aa17.26■□□□□ 0.35
CHCHD1-202ENST00000372837 SPATA31E1Q6ZUB1 1445 aa17.25■□□□□ 0.35
CHCHD1-202ENST00000372837 KLHL34Q8N239 644 aa17.25■□□□□ 0.35
CHCHD1-202ENST00000372837 RNF123Q5XPI4 1314 aa17.24■□□□□ 0.35
CHCHD1-202ENST00000372837 LMO7Q8WWI1 1683 aa17.24■□□□□ 0.35
CHCHD1-202ENST00000372837 C14orf93Q9H972 538 aaKnown RBP17.24■□□□□ 0.35
CHCHD1-202ENST00000372837 DDB1Q16531 1140 aa17.23■□□□□ 0.35
CHCHD1-202ENST00000372837 GPBP1L1Q9HC44 474 aaPredicted RBP17.23■□□□□ 0.35
CHCHD1-202ENST00000372837 POGKQ9P215 609 aa17.23■□□□□ 0.35
CHCHD1-202ENST00000372837 SMG6Q86US8 1419 aaKnown RBP17.22■□□□□ 0.35
CHCHD1-202ENST00000372837 LRRC37A3O60309 1634 aa17.22■□□□□ 0.35
CHCHD1-202ENST00000372837 YBX3P16989 372 aaKnown RBP eCLIP17.22■□□□□ 0.353e-14■□□□□ 8.9
CHCHD1-202ENST00000372837 MARCH10Q8NA82 808 aaPredicted RBP17.22■□□□□ 0.35
CHCHD1-202ENST00000372837 NLGN2Q8NFZ4 835 aa17.22■□□□□ 0.35
CHCHD1-202ENST00000372837 CPDO75976 1380 aa17.22■□□□□ 0.35
CHCHD1-202ENST00000372837 BCL9O00512 1426 aa17.21■□□□□ 0.35
CHCHD1-202ENST00000372837 COL5A2P05997 1499 aaPredicted RBP17.21■□□□□ 0.35
CHCHD1-202ENST00000372837 AATKQ6ZMQ8 1374 aa17.21■□□□□ 0.35
CHCHD1-202ENST00000372837 CFAP70Q5T0N1 1121 aa17.21■□□□□ 0.35
CHCHD1-202ENST00000372837 COL13A1Q5TAT6 717 aaPredicted RBP17.21■□□□□ 0.35
CHCHD1-202ENST00000372837 PRKRIP1Q9H875 184 aaPredicted RBP17.21■□□□□ 0.35
CHCHD1-202ENST00000372837 TULP4Q9NRJ4 1543 aa17.21■□□□□ 0.34
CHCHD1-202ENST00000372837 ROCK2O75116 1388 aaKnown RBP17.2■□□□□ 0.34
CHCHD1-202ENST00000372837 GRIN3BO60391 1043 aa17.2■□□□□ 0.34
CHCHD1-202ENST00000372837 CRB1P82279 1406 aa17.2■□□□□ 0.34
CHCHD1-202ENST00000372837 EIF3AQ14152 1382 aaKnown RBP17.19■□□□□ 0.34
CHCHD1-202ENST00000372837 DNAJC5GQ8N7S2 189 aa17.19■□□□□ 0.34
CHCHD1-202ENST00000372837 KTN1Q86UP2 1357 aaKnown RBP17.18■□□□□ 0.34
CHCHD1-202ENST00000372837 WASLO00401 505 aaPredicted RBP17.18■□□□□ 0.34
CHCHD1-202ENST00000372837 MINK1Q8N4C8 1332 aaPredicted RBP17.18■□□□□ 0.34
CHCHD1-202ENST00000372837 ZNF827Q17R98 1081 aa17.17■□□□□ 0.34
CHCHD1-202ENST00000372837 ADRA2BP18089 450 aa17.16■□□□□ 0.34
CHCHD1-202ENST00000372837 PRELPP51888 382 aa17.16■□□□□ 0.34
CHCHD1-202ENST00000372837 ZNF526Q8TF50 670 aaPredicted RBP17.16■□□□□ 0.34
CHCHD1-202ENST00000372837 PAPPAQ13219 1627 aa17.16■□□□□ 0.34
CHCHD1-202ENST00000372837 POLD1P28340 1107 aa17.15■□□□□ 0.34
CHCHD1-202ENST00000372837 NOP58Q9Y2X3 529 aaKnown RBP17.15■□□□□ 0.34
CHCHD1-202ENST00000372837 ADCY9O60503 1353 aa17.15■□□□□ 0.34
CHCHD1-202ENST00000372837 SLC34A2O95436 690 aa17.14■□□□□ 0.33
CHCHD1-202ENST00000372837 APLP1P51693 650 aa17.14■□□□□ 0.33
CHCHD1-202ENST00000372837 USP19O94966 1318 aa17.14■□□□□ 0.33
CHCHD1-202ENST00000372837 KIF7Q2M1P5 1343 aa17.13■□□□□ 0.33
CHCHD1-202ENST00000372837 SLC16A10Q8TF71 515 aa17.12■□□□□ 0.33
CHCHD1-202ENST00000372837 INSRP06213 1382 aa17.12■□□□□ 0.33
CHCHD1-202ENST00000372837 KIF3CO14782 793 aa17.11■□□□□ 0.33
CHCHD1-202ENST00000372837 GCP02774 474 aa17.11■□□□□ 0.33
CHCHD1-202ENST00000372837 ABTB2Q8N961 1025 aa17.11■□□□□ 0.33
CHCHD1-202ENST00000372837 TRAK1Q9UPV9 953 aa17.11■□□□□ 0.33
CHCHD1-202ENST00000372837 USP47Q96K76 1375 aa17.11■□□□□ 0.33
CHCHD1-202ENST00000372837 TOM1L2Q6ZVM7 507 aa17.1■□□□□ 0.33
CHCHD1-202ENST00000372837 TNS4Q8IZW8 715 aa17.1■□□□□ 0.33
CHCHD1-202ENST00000372837 NUDT16Q96DE0 195 aaKnown RBP17.1■□□□□ 0.33
CHCHD1-202ENST00000372837 TOPAZ1Q8N9V7 1692 aa17.1■□□□□ 0.33
CHCHD1-202ENST00000372837 COL24A1Q17RW2 1714 aa17.1■□□□□ 0.33
CHCHD1-202ENST00000372837 LRRC4BQ9NT99 713 aa17.09■□□□□ 0.33
CHCHD1-202ENST00000372837 AKAP12Q02952 1782 aa17.08■□□□□ 0.33
CHCHD1-202ENST00000372837 POLR3AO14802 1390 aaPredicted RBP17.08■□□□□ 0.32
CHCHD1-202ENST00000372837 ANP32AP39687 249 aaKnown RBP17.08■□□□□ 0.32
CHCHD1-202ENST00000372837 AKT1S1Q96B36 256 aa17.08■□□□□ 0.32
CHCHD1-202ENST00000372837 CDCA7Q9BWT1 371 aaPredicted RBP17.08■□□□□ 0.32
CHCHD1-202ENST00000372837 NUDCQ9Y266 331 aa17.08■□□□□ 0.32
CHCHD1-202ENST00000372837 ACEP12821 1306 aa17.07■□□□□ 0.32
CHCHD1-202ENST00000372837 PNPLA7Q6ZV29 1317 aa17.07■□□□□ 0.32
CHCHD1-202ENST00000372837 ZBTB7CA1YPR0 619 aa17.07■□□□□ 0.32
CHCHD1-202ENST00000372837 IPO9Q96P70 1041 aaKnown RBP17.07■□□□□ 0.32
CHCHD1-202ENST00000372837 MRS2Q9HD23 443 aa17.07■□□□□ 0.32
CHCHD1-202ENST00000372837 DEKP35659 375 aaKnown RBP17.06■□□□□ 0.32
CHCHD1-202ENST00000372837 ADGRB1O14514 1584 aa17.06■□□□□ 0.32
CHCHD1-202ENST00000372837 NLRP13Q86W25 1043 aa17.05■□□□□ 0.32
CHCHD1-202ENST00000372837 ACSBG1Q96GR2 724 aa17.05■□□□□ 0.32
CHCHD1-202ENST00000372837 WNK3Q9BYP7 1800 aa17.05■□□□□ 0.32
CHCHD1-202ENST00000372837 ITSN1Q15811 1721 aa17.04■□□□□ 0.32
CHCHD1-202ENST00000372837 WDR17Q8IZU2 1322 aa17.03■□□□□ 0.32
CHCHD1-202ENST00000372837 EXOC5O00471 708 aa17.03■□□□□ 0.32
CHCHD1-202ENST00000372837 AXIN2Q9Y2T1 843 aa17.03■□□□□ 0.32
CHCHD1-202ENST00000372837 NHSQ6T4R5 1651 aa17.03■□□□□ 0.32
CHCHD1-202ENST00000372837 MS4A1P11836 297 aa17.02■□□□□ 0.32
CHCHD1-202ENST00000372837 JMYQ8N9B5 988 aa17.02■□□□□ 0.32
CHCHD1-202ENST00000372837 PLEKHG3A1L390 1219 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms