RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 MAP3K19Q56UN5 1328 aa13.05□□□□□ -0.32
TMEM254-201ENST00000372273 MARF1Q9Y4F3 1742 aaKnown RBP13.05□□□□□ -0.32
TMEM254-201ENST00000372273 CPDO75976 1380 aa13.05□□□□□ -0.32
TMEM254-201ENST00000372273 PHRF1Q9P1Y6 1649 aaKnown RBP13.05□□□□□ -0.32
TMEM254-201ENST00000372273 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
TMEM254-201ENST00000372273 CAMTA1Q9Y6Y1 1673 aa13.04□□□□□ -0.32
TMEM254-201ENST00000372273 SLIT3O75094 1523 aa13.04□□□□□ -0.32
TMEM254-201ENST00000372273 NFAT5O94916 1531 aa13.03□□□□□ -0.32
TMEM254-201ENST00000372273 FAM98CQ17RN3 349 aaKnown RBP13.03□□□□□ -0.32
TMEM254-201ENST00000372273 HSP90AB2PQ58FF8 381 aa13.02□□□□□ -0.33
TMEM254-201ENST00000372273 AMPHP49418 695 aa13.01□□□□□ -0.33
TMEM254-201ENST00000372273 RBM6P78332 1123 aaKnown RBP13.01□□□□□ -0.33
TMEM254-201ENST00000372273 VPS72Q15906 364 aa13.01□□□□□ -0.33
TMEM254-201ENST00000372273 AATKQ6ZMQ8 1374 aa13.01□□□□□ -0.33
TMEM254-201ENST00000372273 A0A0G2JS52 829 aa13.01□□□□□ -0.33
TMEM254-201ENST00000372273 MYT1Q01538 1121 aa13.01□□□□□ -0.33
TMEM254-201ENST00000372273 MORC1Q86VD1 984 aa13.01□□□□□ -0.33
TMEM254-201ENST00000372273 ATRNO75882 1429 aa13.01□□□□□ -0.33
TMEM254-201ENST00000372273 CSB-PGBD3P0DP91 1061 aa13□□□□□ -0.33
TMEM254-201ENST00000372273 HOXC9P31274 260 aa13□□□□□ -0.33
TMEM254-201ENST00000372273 FAM182BQ5T319 152 aa13□□□□□ -0.33
TMEM254-201ENST00000372273 TOM1L2Q6ZVM7 507 aa13□□□□□ -0.33
TMEM254-201ENST00000372273 POLKQ9UBT6 870 aa13□□□□□ -0.33
TMEM254-201ENST00000372273 COL5A2P05997 1499 aaPredicted RBP12.99□□□□□ -0.33
TMEM254-201ENST00000372273 SPATA31A5Q5VU36 1347 aa12.99□□□□□ -0.33
TMEM254-201ENST00000372273 SPATA31A7Q8IWB4 1347 aa12.99□□□□□ -0.33
TMEM254-201ENST00000372273 ANKRD24Q8TF21 1146 aa12.99□□□□□ -0.33
TMEM254-201ENST00000372273 PLCH1Q4KWH8 1693 aa12.99□□□□□ -0.33
TMEM254-201ENST00000372273 IP6K1Q92551 441 aa12.98□□□□□ -0.33
TMEM254-201ENST00000372273 ERBB3P21860 1342 aa12.98□□□□□ -0.33
TMEM254-201ENST00000372273 SPATA31A1Q5TZJ5 1347 aa12.98□□□□□ -0.33
TMEM254-201ENST00000372273 USHBP1Q8N6Y0 703 aa12.98□□□□□ -0.33
TMEM254-201ENST00000372273 NLRP2Q9NX02 1062 aa12.98□□□□□ -0.33
TMEM254-201ENST00000372273 COL14A1Q05707 1796 aaKnown RBP12.98□□□□□ -0.33
TMEM254-201ENST00000372273 SEPT12Q8IYM1 358 aa12.97□□□□□ -0.33
TMEM254-201ENST00000372273 RGS12O14924 1447 aa12.97□□□□□ -0.33
TMEM254-201ENST00000372273 LMO7Q8WWI1 1683 aa12.97□□□□□ -0.33
TMEM254-201ENST00000372273 ANP32CO43423 234 aa12.97□□□□□ -0.33
TMEM254-201ENST00000372273 WDR17Q8IZU2 1322 aa12.96□□□□□ -0.33
TMEM254-201ENST00000372273 GLI3P10071 1580 aa12.96□□□□□ -0.34
TMEM254-201ENST00000372273 COL18A1P39060 1754 aa12.95□□□□□ -0.34
TMEM254-201ENST00000372273 NBPF6Q5VWK0 638 aa12.95□□□□□ -0.34
TMEM254-201ENST00000372273 TCP11L2Q8N4U5 519 aa12.95□□□□□ -0.34
TMEM254-201ENST00000372273 NBPF4Q96M43 638 aa12.95□□□□□ -0.34
TMEM254-201ENST00000372273 MTHFSP49914 203 aa12.94□□□□□ -0.34
TMEM254-201ENST00000372273 KIF20BQ96Q89 1820 aa12.94□□□□□ -0.34
TMEM254-201ENST00000372273 RGPD5Q99666 1765 aa12.94□□□□□ -0.34
TMEM254-201ENST00000372273 NRAPQ86VF7 1730 aa12.93□□□□□ -0.34
TMEM254-201ENST00000372273 CRB1P82279 1406 aa12.93□□□□□ -0.34
TMEM254-201ENST00000372273 ONECUT3O60422 494 aaPredicted RBP12.93□□□□□ -0.34
TMEM254-201ENST00000372273 LTN1O94822 1766 aa12.93□□□□□ -0.34
TMEM254-201ENST00000372273 PEAK1Q9H792 1746 aa12.93□□□□□ -0.34
TMEM254-201ENST00000372273 USP54Q70EL1 1684 aa12.92□□□□□ -0.34
TMEM254-201ENST00000372273 NSD2O96028 1365 aa12.92□□□□□ -0.34
TMEM254-201ENST00000372273 NWD2Q9ULI1 1742 aa12.92□□□□□ -0.34
TMEM254-201ENST00000372273 FLT4P35916 1363 aa12.92□□□□□ -0.34
TMEM254-201ENST00000372273 CCER2I3L3R5 266 aa12.92□□□□□ -0.34
TMEM254-201ENST00000372273 CARD10Q9BWT7 1032 aa12.92□□□□□ -0.34
TMEM254-201ENST00000372273 EIF4A2Q14240 407 aaKnown RBP12.91□□□□□ -0.34
TMEM254-201ENST00000372273 INSRP06213 1382 aa12.9□□□□□ -0.34
TMEM254-201ENST00000372273 BLMP54132 1417 aaPredicted RBP12.9□□□□□ -0.34
TMEM254-201ENST00000372273 EYA1Q99502 592 aa12.9□□□□□ -0.34
TMEM254-201ENST00000372273 BARGINQ6ZT62 677 aa12.89□□□□□ -0.35
TMEM254-201ENST00000372273 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
TMEM254-201ENST00000372273 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.89□□□□□ -0.35
TMEM254-201ENST00000372273 KRT27Q7Z3Y8 459 aa12.89□□□□□ -0.35
TMEM254-201ENST00000372273 PPP2R1AP30153 589 aa12.88□□□□□ -0.35
TMEM254-201ENST00000372273 AEBP1Q8IUX7 1158 aa12.88□□□□□ -0.35
TMEM254-201ENST00000372273 RTL1A6NKG5 1358 aa12.88□□□□□ -0.35
TMEM254-201ENST00000372273 NPC1L1Q9UHC9 1359 aa12.88□□□□□ -0.35
TMEM254-201ENST00000372273 MAP2P11137 1827 aaKnown RBP12.87□□□□□ -0.35
TMEM254-201ENST00000372273 THRAP3Q9Y2W1 955 aaKnown RBP12.87□□□□□ -0.35
TMEM254-201ENST00000372273 DDB1Q16531 1140 aa12.87□□□□□ -0.35
TMEM254-201ENST00000372273 IL2RBP14784 551 aa12.86□□□□□ -0.35
TMEM254-201ENST00000372273 PDE3BQ13370 1112 aa12.86□□□□□ -0.35
TMEM254-201ENST00000372273 IL13P35225 146 aa12.85□□□□□ -0.35
TMEM254-201ENST00000372273 PTF1AQ7RTS3 328 aa12.85□□□□□ -0.35
TMEM254-201ENST00000372273 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
TMEM254-201ENST00000372273 DDX54Q8TDD1 881 aaKnown RBP12.85□□□□□ -0.35
TMEM254-201ENST00000372273 SOCS7O14512 581 aa12.85□□□□□ -0.35
TMEM254-201ENST00000372273 HMOX1P09601 288 aa12.85□□□□□ -0.35
TMEM254-201ENST00000372273 CDK12Q9NYV4 1490 aaPredicted RBP12.85□□□□□ -0.35
TMEM254-201ENST00000372273 SMG6Q86US8 1419 aaKnown RBP12.84□□□□□ -0.35
TMEM254-201ENST00000372273 EXOC5O00471 708 aa12.84□□□□□ -0.35
TMEM254-201ENST00000372273 ANKRD26Q9UPS8 1709 aa12.84□□□□□ -0.35
TMEM254-201ENST00000372273 MEGF6O75095 1541 aa12.84□□□□□ -0.35
TMEM254-201ENST00000372273 KIF24Q5T7B8 1368 aa12.84□□□□□ -0.35
TMEM254-201ENST00000372273 PARD3Q8TEW0 1356 aa12.84□□□□□ -0.35
TMEM254-201ENST00000372273 SULT6B1Q6IMI4 303 aa12.84□□□□□ -0.35
TMEM254-201ENST00000372273 RGPD2P0DJD1 1756 aa12.84□□□□□ -0.35
TMEM254-201ENST00000372273 UPF1Q92900 1129 aaKnown RBP eCLIP12.83□□□□□ -0.36
TMEM254-201ENST00000372273 DISP2A7MBM2 1401 aa12.83□□□□□ -0.36
TMEM254-201ENST00000372273 U2SURPO15042 1029 aaKnown RBP12.82□□□□□ -0.36
TMEM254-201ENST00000372273 RAPGEF4Q8WZA2 1011 aa12.82□□□□□ -0.36
TMEM254-201ENST00000372273 PRKRIP1Q9H875 184 aaPredicted RBP12.82□□□□□ -0.36
TMEM254-201ENST00000372273 ABCC6O95255 1503 aa12.82□□□□□ -0.36
TMEM254-201ENST00000372273 DIAPH1O60610 1272 aaKnown RBP12.82□□□□□ -0.36
TMEM254-201ENST00000372273 TRIM37O94972 964 aa12.82□□□□□ -0.36
TMEM254-201ENST00000372273 BRWD3Q6RI45 1802 aa12.81□□□□□ -0.36
TMEM254-201ENST00000372273 ACSBG1Q96GR2 724 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms