RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 NLRP6P59044 892 aa21.46■■□□□ 1.03
SS18L1-202ENST00000370848 TTC21BQ7Z4L5 1316 aa21.45■■□□□ 1.02
SS18L1-202ENST00000370848 BCL9O00512 1426 aa21.45■■□□□ 1.02
SS18L1-202ENST00000370848 SBF2Q86WG5 1849 aa21.44■■□□□ 1.02
SS18L1-202ENST00000370848 CD163L1Q9NR16 1453 aa21.44■■□□□ 1.02
SS18L1-202ENST00000370848 TRIM37O94972 964 aa21.43■■□□□ 1.02
SS18L1-202ENST00000370848 PDE3BQ13370 1112 aa21.43■■□□□ 1.02
SS18L1-202ENST00000370848 EZH2Q15910 746 aaKnown RBP21.43■■□□□ 1.02
SS18L1-202ENST00000370848 ARHGEF25Q86VW2 580 aa21.43■■□□□ 1.02
SS18L1-202ENST00000370848 USP35Q9P2H5 1018 aa21.43■■□□□ 1.02
SS18L1-202ENST00000370848 OVOS2A0A0G2JMS6 1433 aa21.43■■□□□ 1.02
SS18L1-202ENST00000370848 OVOS2A0A0J9YW53 1432 aa21.43■■□□□ 1.02
SS18L1-202ENST00000370848 OVOS2Q6IE36 1432 aa21.43■■□□□ 1.02
SS18L1-202ENST00000370848 USP31Q70CQ4 1352 aa21.42■■□□□ 1.02
SS18L1-202ENST00000370848 WDR17Q8IZU2 1322 aa21.42■■□□□ 1.02
SS18L1-202ENST00000370848 KCNH5Q8NCM2 988 aa21.42■■□□□ 1.02
SS18L1-202ENST00000370848 PSDA5PKW4 1024 aaPredicted RBP21.4■■□□□ 1.02
SS18L1-202ENST00000370848 RGPD5Q99666 1765 aa21.4■■□□□ 1.02
SS18L1-202ENST00000370848 AXIN2Q9Y2T1 843 aa21.39■■□□□ 1.01
SS18L1-202ENST00000370848 KTN1Q86UP2 1357 aaKnown RBP21.38■■□□□ 1.01
SS18L1-202ENST00000370848 ST20-MTHFSA0A0A6YYL1 179 aa21.38■■□□□ 1.01
SS18L1-202ENST00000370848 APBA3O96018 575 aa21.38■■□□□ 1.01
SS18L1-202ENST00000370848 PUS7Q96PZ0 661 aaKnown RBP21.38■■□□□ 1.01
SS18L1-202ENST00000370848 USP47Q96K76 1375 aa21.37■■□□□ 1.01
SS18L1-202ENST00000370848 CDCA7Q9BWT1 371 aaPredicted RBP21.37■■□□□ 1.01
SS18L1-202ENST00000370848 R3HDM1Q15032 1099 aaKnown RBP21.36■■□□□ 1.01
SS18L1-202ENST00000370848 TESK2Q96S53 571 aa21.36■■□□□ 1.01
SS18L1-202ENST00000370848 CARD10Q9BWT7 1032 aa21.34■■□□□ 1.01
SS18L1-202ENST00000370848 EDC4Q6P2E9 1401 aaKnown RBP21.33■■□□□ 1.01
SS18L1-202ENST00000370848 CCDC7Q96M83 1385 aa21.33■■□□□ 1
SS18L1-202ENST00000370848 PLSCR1O15162 318 aa21.32■■□□□ 1
SS18L1-202ENST00000370848 DDB1Q16531 1140 aa21.32■■□□□ 1
SS18L1-202ENST00000370848 TOM1L2Q6ZVM7 507 aa21.32■■□□□ 1
SS18L1-202ENST00000370848 LTN1O94822 1766 aa21.32■■□□□ 1
SS18L1-202ENST00000370848 TNS2Q63HR2 1409 aa21.3■■□□□ 1
SS18L1-202ENST00000370848 NINLQ9Y2I6 1382 aa21.3■■□□□ 1
SS18L1-202ENST00000370848 A0A1W2PP64 1363 aa21.28■■□□□ 1
SS18L1-202ENST00000370848 BCL11BQ9C0K0 894 aaPredicted RBP21.28■■□□□ 1
SS18L1-202ENST00000370848 ERBB3P21860 1342 aa21.28■■□□□ 1
SS18L1-202ENST00000370848 MARCH10Q8NA82 808 aaPredicted RBP21.27■■□□□ 1
SS18L1-202ENST00000370848 CASZ1Q86V15 1759 aa21.27■■□□□ 1
SS18L1-202ENST00000370848 NHSQ6T4R5 1651 aa21.27■■□□□ 1
SS18L1-202ENST00000370848 FAM208AQ9UK61 1670 aaKnown RBP21.26■□□□□ 0.99
SS18L1-202ENST00000370848 ZBTB7CA1YPR0 619 aa21.26■□□□□ 0.99
SS18L1-202ENST00000370848 NBPF14Q5TI25 921 aa21.25■□□□□ 0.99
SS18L1-202ENST00000370848 SLC24A1O60721 1099 aa21.23■□□□□ 0.99
SS18L1-202ENST00000370848 HDGFL2Q7Z4V5 671 aaPredicted RBP21.23■□□□□ 0.99
SS18L1-202ENST00000370848 NME9Q86XW9 330 aa21.23■□□□□ 0.99
SS18L1-202ENST00000370848 TMC1Q8TDI8 760 aa21.23■□□□□ 0.99
SS18L1-202ENST00000370848 SLC12A5Q9H2X9 1139 aa21.23■□□□□ 0.99
SS18L1-202ENST00000370848 TERF2IPQ9NYB0 399 aa21.22■□□□□ 0.99
SS18L1-202ENST00000370848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.21■□□□□ 0.99
SS18L1-202ENST00000370848 HSPA5P11021 654 aaKnown RBP21.2■□□□□ 0.98
SS18L1-202ENST00000370848 TMF1P82094 1093 aa21.2■□□□□ 0.98
SS18L1-202ENST00000370848 PTF1AQ7RTS3 328 aa21.2■□□□□ 0.98
SS18L1-202ENST00000370848 EXOC5O00471 708 aa21.19■□□□□ 0.98
SS18L1-202ENST00000370848 SOX12O15370 315 aa21.19■□□□□ 0.98
SS18L1-202ENST00000370848 CSB-PGBD3P0DP91 1061 aa21.19■□□□□ 0.98
SS18L1-202ENST00000370848 PROM2Q8N271 834 aa21.19■□□□□ 0.98
SS18L1-202ENST00000370848 PAPPAQ13219 1627 aa21.18■□□□□ 0.98
SS18L1-202ENST00000370848 ANO8Q9HCE9 1232 aaPredicted RBP21.18■□□□□ 0.98
SS18L1-202ENST00000370848 EIF4G2P78344 907 aaKnown RBP eCLIP21.17■□□□□ 0.98
SS18L1-202ENST00000370848 ANKRD36BQ8N2N9 1353 aa21.15■□□□□ 0.98
SS18L1-202ENST00000370848 SPON1Q9HCB6 807 aa21.15■□□□□ 0.98
SS18L1-202ENST00000370848 KCNQ2O43526 872 aa21.14■□□□□ 0.97
SS18L1-202ENST00000370848 IL2RBP14784 551 aa21.14■□□□□ 0.97
SS18L1-202ENST00000370848 ANKRD24Q8TF21 1146 aa21.14■□□□□ 0.97
SS18L1-202ENST00000370848 IP6K1Q92551 441 aa21.14■□□□□ 0.97
SS18L1-202ENST00000370848 BTAF1O14981 1849 aa21.13■□□□□ 0.97
SS18L1-202ENST00000370848 RTL1A6NKG5 1358 aa21.11■□□□□ 0.97
SS18L1-202ENST00000370848 TXNRD1Q16881 649 aa21.11■□□□□ 0.97
SS18L1-202ENST00000370848 NLRP2Q9NX02 1062 aa21.11■□□□□ 0.97
SS18L1-202ENST00000370848 SHANK3Q9BYB0 1731 aa21.11■□□□□ 0.97
SS18L1-202ENST00000370848 QSER1Q2KHR3 1735 aa21.08■□□□□ 0.97
SS18L1-202ENST00000370848 CDCA8Q53HL2 280 aa21.08■□□□□ 0.97
SS18L1-202ENST00000370848 POLR3GLQ9BT43 218 aa21.08■□□□□ 0.97
SS18L1-202ENST00000370848 MAP3K19Q56UN5 1328 aa21.07■□□□□ 0.96
SS18L1-202ENST00000370848 MYOM1P52179 1685 aa21.07■□□□□ 0.96
SS18L1-202ENST00000370848 SLC15A2Q16348 729 aa21.06■□□□□ 0.96
SS18L1-202ENST00000370848 COG3Q96JB2 828 aa21.06■□□□□ 0.96
SS18L1-202ENST00000370848 HOXC9P31274 260 aa21.05■□□□□ 0.96
SS18L1-202ENST00000370848 KIF20BQ96Q89 1820 aa21.05■□□□□ 0.96
SS18L1-202ENST00000370848 RGPD2P0DJD1 1756 aa21.05■□□□□ 0.96
SS18L1-202ENST00000370848 COL24A1Q17RW2 1714 aa21.04■□□□□ 0.96
SS18L1-202ENST00000370848 PTGER2P43116 358 aa21.04■□□□□ 0.96
SS18L1-202ENST00000370848 KIF24Q5T7B8 1368 aa21.04■□□□□ 0.96
SS18L1-202ENST00000370848 PDGFDQ9GZP0 370 aaPredicted RBP21.03■□□□□ 0.96
SS18L1-202ENST00000370848 STK32BQ9NY57 414 aa21.03■□□□□ 0.96
SS18L1-202ENST00000370848 LY75O60449 1722 aa21.03■□□□□ 0.96
SS18L1-202ENST00000370848 DOT1LQ8TEK3 1739 aa21.02■□□□□ 0.96
SS18L1-202ENST00000370848 FYB1O15117 783 aa21.02■□□□□ 0.96
SS18L1-202ENST00000370848 SGIP1Q9BQI5 828 aa21.02■□□□□ 0.96
SS18L1-202ENST00000370848 MEGF6O75095 1541 aa21.02■□□□□ 0.96
SS18L1-202ENST00000370848 ANKRD26Q9UPS8 1709 aa21.01■□□□□ 0.95
SS18L1-202ENST00000370848 ACSBG1Q96GR2 724 aa21■□□□□ 0.95
SS18L1-202ENST00000370848 CARD14Q9BXL6 1004 aa21■□□□□ 0.95
SS18L1-202ENST00000370848 NSD2O96028 1365 aa20.99■□□□□ 0.95
SS18L1-202ENST00000370848 PPP1R1BQ9UD71 204 aaPredicted RBP20.99■□□□□ 0.95
SS18L1-202ENST00000370848 CGNL1Q0VF96 1302 aa20.99■□□□□ 0.95
SS18L1-202ENST00000370848 NCAPD2Q15021 1401 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms