RNA–Protein interactions for RNA: ENST00000368356.8

FDPS-202, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 2 BASIC

Gene FDPS, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-202ENST00000368356 CPDO75976 1380 aa21.26■□□□□ 0.99
FDPS-202ENST00000368356 FAM83GA6ND36 823 aa21.26■□□□□ 0.99
FDPS-202ENST00000368356 GCP02774 474 aa21.24■□□□□ 0.99
FDPS-202ENST00000368356 SOCS7O14512 581 aa21.23■□□□□ 0.99
FDPS-202ENST00000368356 TNNT2P45379 298 aaPredicted RBP21.23■□□□□ 0.99
FDPS-202ENST00000368356 ZC3H6P61129 1189 aaKnown RBP21.23■□□□□ 0.99
FDPS-202ENST00000368356 KCNH5Q8NCM2 988 aa21.22■□□□□ 0.99
FDPS-202ENST00000368356 BTG4Q9NY30 223 aa21.22■□□□□ 0.99
FDPS-202ENST00000368356 LMO7Q8WWI1 1683 aa21.22■□□□□ 0.99
FDPS-202ENST00000368356 GLI3P10071 1580 aa21.21■□□□□ 0.99
FDPS-202ENST00000368356 RGS12O14924 1447 aa21.21■□□□□ 0.99
FDPS-202ENST00000368356 VPS72Q15906 364 aa21.21■□□□□ 0.99
FDPS-202ENST00000368356 GJD4Q96KN9 370 aaPredicted RBP21.21■□□□□ 0.99
FDPS-202ENST00000368356 POLKQ9UBT6 870 aa21.21■□□□□ 0.99
FDPS-202ENST00000368356 NFAT5O94916 1531 aa21.2■□□□□ 0.98
FDPS-202ENST00000368356 SMG6Q86US8 1419 aaKnown RBP21.2■□□□□ 0.98
FDPS-202ENST00000368356 MTHFSP49914 203 aa21.2■□□□□ 0.98
FDPS-202ENST00000368356 CCDC184Q52MB2 194 aa21.2■□□□□ 0.98
FDPS-202ENST00000368356 LTN1O94822 1766 aa21.2■□□□□ 0.98
FDPS-202ENST00000368356 FBLN1P23142 703 aa21.19■□□□□ 0.98
FDPS-202ENST00000368356 CHRNA2Q15822 529 aa21.19■□□□□ 0.98
FDPS-202ENST00000368356 MRS2Q9HD23 443 aa21.17■□□□□ 0.98
FDPS-202ENST00000368356 ABCC6O95255 1503 aa21.16■□□□□ 0.98
FDPS-202ENST00000368356 CCDC9Q9Y3X0 531 aaKnown RBP21.16■□□□□ 0.98
FDPS-202ENST00000368356 INSRP06213 1382 aa21.16■□□□□ 0.98
FDPS-202ENST00000368356 KIF24Q5T7B8 1368 aa21.16■□□□□ 0.98
FDPS-202ENST00000368356 CAMTA1Q9Y6Y1 1673 aa21.15■□□□□ 0.98
FDPS-202ENST00000368356 RRS1Q15050 365 aaKnown RBP21.15■□□□□ 0.98
FDPS-202ENST00000368356 COL18A1P39060 1754 aa21.15■□□□□ 0.98
FDPS-202ENST00000368356 PEAK1Q9H792 1746 aa21.15■□□□□ 0.98
FDPS-202ENST00000368356 EMILIN1Q9Y6C2 1016 aa21.14■□□□□ 0.98
FDPS-202ENST00000368356 MAP3K19Q56UN5 1328 aa21.14■□□□□ 0.97
FDPS-202ENST00000368356 ZBTB7CA1YPR0 619 aa21.13■□□□□ 0.97
FDPS-202ENST00000368356 SOX12O15370 315 aa21.13■□□□□ 0.97
FDPS-202ENST00000368356 ARHGEF25Q86VW2 580 aa21.12■□□□□ 0.97
FDPS-202ENST00000368356 CFAP53Q96M91 514 aa21.12■□□□□ 0.97
FDPS-202ENST00000368356 COL5A2P05997 1499 aaPredicted RBP21.12■□□□□ 0.97
FDPS-202ENST00000368356 STRN4Q9NRL3 753 aa21.12■□□□□ 0.97
FDPS-202ENST00000368356 COL3A1P02461 1466 aaPredicted RBP21.11■□□□□ 0.97
FDPS-202ENST00000368356 EVA1CP58658 441 aa21.11■□□□□ 0.97
FDPS-202ENST00000368356 PNISRQ8TF01 805 aaKnown RBP21.11■□□□□ 0.97
FDPS-202ENST00000368356 SPATA31A5Q5VU36 1347 aa21.1■□□□□ 0.97
FDPS-202ENST00000368356 SPATA31A7Q8IWB4 1347 aa21.1■□□□□ 0.97
FDPS-202ENST00000368356 RTL1A6NKG5 1358 aa21.1■□□□□ 0.97
FDPS-202ENST00000368356 FLT4P35916 1363 aa21.1■□□□□ 0.97
FDPS-202ENST00000368356 RGPD5Q99666 1765 aa21.09■□□□□ 0.97
FDPS-202ENST00000368356 PPM1GO15355 546 aaPredicted RBP21.09■□□□□ 0.97
FDPS-202ENST00000368356 SPATA31A1Q5TZJ5 1347 aa21.08■□□□□ 0.96
FDPS-202ENST00000368356 AMPHP49418 695 aa21.07■□□□□ 0.96
FDPS-202ENST00000368356 IP6K1Q92551 441 aa21.07■□□□□ 0.96
FDPS-202ENST00000368356 BRWD3Q6RI45 1802 aa21.07■□□□□ 0.96
FDPS-202ENST00000368356 HOXC9P31274 260 aa21.06■□□□□ 0.96
FDPS-202ENST00000368356 THSD7AQ9UPZ6 1657 aa21.06■□□□□ 0.96
FDPS-202ENST00000368356 CRB1P82279 1406 aa21.05■□□□□ 0.96
FDPS-202ENST00000368356 ONECUT3O60422 494 aaPredicted RBP21.05■□□□□ 0.96
FDPS-202ENST00000368356 DIAPH1O60610 1272 aaKnown RBP21.04■□□□□ 0.96
FDPS-202ENST00000368356 HSP90AB2PQ58FF8 381 aa21.04■□□□□ 0.96
FDPS-202ENST00000368356 LARP1Q6PKG0 1096 aaKnown RBP21.04■□□□□ 0.96
FDPS-202ENST00000368356 A0A0G2JS52 829 aa21.04■□□□□ 0.96
FDPS-202ENST00000368356 MYT1Q01538 1121 aa21.04■□□□□ 0.96
FDPS-202ENST00000368356 FAM98CQ17RN3 349 aaKnown RBP21.04■□□□□ 0.96
FDPS-202ENST00000368356 SEPT12Q8IYM1 358 aa21.04■□□□□ 0.96
FDPS-202ENST00000368356 AXIN2Q9Y2T1 843 aa21.04■□□□□ 0.96
FDPS-202ENST00000368356 WDR17Q8IZU2 1322 aa21.03■□□□□ 0.96
FDPS-202ENST00000368356 BLMP54132 1417 aaPredicted RBP21.03■□□□□ 0.96
FDPS-202ENST00000368356 IL13P35225 146 aa21.02■□□□□ 0.96
FDPS-202ENST00000368356 NUDCQ9Y266 331 aa21.02■□□□□ 0.96
FDPS-202ENST00000368356 THRAP3Q9Y2W1 955 aaKnown RBP21.02■□□□□ 0.96
FDPS-202ENST00000368356 RGPD1P0DJD0 1748 aa21.01■□□□□ 0.95
FDPS-202ENST00000368356 WNK3Q9BYP7 1800 aa21.01■□□□□ 0.95
FDPS-202ENST00000368356 FAM9BQ8IZU0 186 aa21.01■□□□□ 0.95
FDPS-202ENST00000368356 TCP11L2Q8N4U5 519 aa21.01■□□□□ 0.95
FDPS-202ENST00000368356 USP35Q9P2H5 1018 aa21.01■□□□□ 0.95
FDPS-202ENST00000368356 FAM208AQ9UK61 1670 aaKnown RBP21■□□□□ 0.95
FDPS-202ENST00000368356 EIF4A2Q14240 407 aaKnown RBP21■□□□□ 0.95
FDPS-202ENST00000368356 WDR43Q15061 677 aaKnown RBP eCLIP21■□□□□ 0.953e-7■■■■□ 25.4
FDPS-202ENST00000368356 BARGINQ6ZT62 677 aa21■□□□□ 0.95
FDPS-202ENST00000368356 TOM1L2Q6ZVM7 507 aa21■□□□□ 0.95
FDPS-202ENST00000368356 CSB-PGBD3P0DP91 1061 aa20.99■□□□□ 0.95
FDPS-202ENST00000368356 ERBB3P21860 1342 aa20.99■□□□□ 0.95
FDPS-202ENST00000368356 PARP4Q9UKK3 1724 aaKnown RBP20.98■□□□□ 0.95
FDPS-202ENST00000368356 ADAMTS8Q9UP79 889 aa20.98■□□□□ 0.95
FDPS-202ENST00000368356 RGPD2P0DJD1 1756 aa20.96■□□□□ 0.95
FDPS-202ENST00000368356 KRT27Q7Z3Y8 459 aa20.96■□□□□ 0.95
FDPS-202ENST00000368356 CARD10Q9BWT7 1032 aa20.95■□□□□ 0.95
FDPS-202ENST00000368356 U2SURPO15042 1029 aaKnown RBP20.95■□□□□ 0.94
FDPS-202ENST00000368356 U2AF1L5P0DN76 240 aaPredicted RBP20.95■□□□□ 0.94
FDPS-202ENST00000368356 U2AF1Q01081 240 aaKnown RBP eCLIP20.95■□□□□ 0.94
FDPS-202ENST00000368356 ANKRD24Q8TF21 1146 aa20.95■□□□□ 0.94
FDPS-202ENST00000368356 UPF1Q92900 1129 aaKnown RBP eCLIP20.95■□□□□ 0.94
FDPS-202ENST00000368356 LRRC37A3O60309 1634 aa20.93■□□□□ 0.94
FDPS-202ENST00000368356 IGSF1Q8N6C5 1336 aa20.92■□□□□ 0.94
FDPS-202ENST00000368356 EYA1Q99502 592 aa20.92■□□□□ 0.94
FDPS-202ENST00000368356 FCHSD2O94868 740 aa20.91■□□□□ 0.94
FDPS-202ENST00000368356 LTV1Q96GA3 475 aaPredicted RBP20.91■□□□□ 0.94
FDPS-202ENST00000368356 CDCA7Q9BWT1 371 aaPredicted RBP20.91■□□□□ 0.94
FDPS-202ENST00000368356 EP400Q96L91 3159 aa20.91■□□□□ 0.94
FDPS-202ENST00000368356 KDRP35968 1356 aa20.9■□□□□ 0.94
FDPS-202ENST00000368356 NCAPD2Q15021 1401 aa20.89■□□□□ 0.94
FDPS-202ENST00000368356 PNNQ9H307 717 aaKnown RBP20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms