RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 SPINT1O43278 529 aa8.78□□□□□ -1
ECHDC1-201ENST00000368287 ITGA6P23229 1130 aa8.78□□□□□ -1
ECHDC1-201ENST00000368287 TSC1Q92574 1164 aa8.78□□□□□ -1
ECHDC1-201ENST00000368287 PGPEP1Q9NXJ5 209 aa8.78□□□□□ -1
ECHDC1-201ENST00000368287 CBLBQ13191 982 aa8.77□□□□□ -1.01
ECHDC1-201ENST00000368287 PRPF38BQ5VTL8 546 aaKnown RBP8.77□□□□□ -1.01
ECHDC1-201ENST00000368287 CABLES1Q8TDN4 633 aa8.77□□□□□ -1.01
ECHDC1-201ENST00000368287 MAP3K10Q02779 954 aa8.76□□□□□ -1.01
ECHDC1-201ENST00000368287 AMHR2Q16671 573 aa8.76□□□□□ -1.01
ECHDC1-201ENST00000368287 XP32Q5T750 250 aa8.76□□□□□ -1.01
ECHDC1-201ENST00000368287 PPP1R26Q5T8A7 1209 aaPredicted RBP8.76□□□□□ -1.01
ECHDC1-201ENST00000368287 CSPP1Q1MSJ5 1256 aa8.75□□□□□ -1.01
ECHDC1-201ENST00000368287 Q6ZVU0 165 aa8.75□□□□□ -1.01
ECHDC1-201ENST00000368287 SH3BP5LQ7L8J4 393 aa8.75□□□□□ -1.01
ECHDC1-201ENST00000368287 CARD14Q9BXL6 1004 aa8.75□□□□□ -1.01
ECHDC1-201ENST00000368287 ADAMTS2O95450 1211 aa8.74□□□□□ -1.01
ECHDC1-201ENST00000368287 RIC3Q7Z5B4 369 aa8.74□□□□□ -1.01
ECHDC1-201ENST00000368287 LYPD4Q6UWN0 246 aa8.73□□□□□ -1.01
ECHDC1-201ENST00000368287 MSTNO14793 375 aa8.72□□□□□ -1.01
ECHDC1-201ENST00000368287 HAP1P54257 671 aaPredicted RBP8.72□□□□□ -1.01
ECHDC1-201ENST00000368287 KDM2AQ9Y2K7 1162 aa8.72□□□□□ -1.01
ECHDC1-201ENST00000368287 CTSOP43234 321 aaPredicted RBP8.71□□□□□ -1.02
ECHDC1-201ENST00000368287 ERFEQ4G0M1 354 aa8.71□□□□□ -1.02
ECHDC1-201ENST00000368287 POLMQ9NP87 494 aaPredicted RBP8.71□□□□□ -1.02
ECHDC1-201ENST00000368287 NUTM2BA6NNL0 878 aaPredicted RBP8.7□□□□□ -1.02
ECHDC1-201ENST00000368287 NUTM2EB1AL46 878 aaPredicted RBP8.7□□□□□ -1.02
ECHDC1-201ENST00000368287 ADAM23O75077 832 aa8.7□□□□□ -1.02
ECHDC1-201ENST00000368287 SRSF11Q05519 484 aaKnown RBP8.7□□□□□ -1.02
ECHDC1-201ENST00000368287 NUTM2DQ5VT03 806 aaPredicted RBP8.7□□□□□ -1.02
ECHDC1-201ENST00000368287 NUTM2AQ8IVF1 878 aaPredicted RBP8.7□□□□□ -1.02
ECHDC1-201ENST00000368287 ENAMQ9NRM1 1142 aa8.7□□□□□ -1.02
ECHDC1-201ENST00000368287 CELA2BP08218 269 aaPredicted RBP8.69□□□□□ -1.02
ECHDC1-201ENST00000368287 RELBQ01201 579 aa8.69□□□□□ -1.02
ECHDC1-201ENST00000368287 DHX9Q08211 1270 aaKnown RBP8.69□□□□□ -1.02
ECHDC1-201ENST00000368287 PLA2G4EQ3MJ16 856 aa8.69□□□□□ -1.02
ECHDC1-201ENST00000368287 GPKOWQ92917 476 aaPredicted RBP eCLIP8.69□□□□□ -1.02
ECHDC1-201ENST00000368287 AGBL1Q96MI9 1066 aa8.69□□□□□ -1.02
ECHDC1-201ENST00000368287 INSM2Q96T92 566 aaPredicted RBP8.69□□□□□ -1.02
ECHDC1-201ENST00000368287 PHF20L1A8MW92 1017 aa8.68□□□□□ -1.02
ECHDC1-201ENST00000368287 HELBQ8NG08 1087 aaPredicted RBP8.68□□□□□ -1.02
ECHDC1-201ENST00000368287 BARGINQ6ZT62 677 aa8.67□□□□□ -1.02
ECHDC1-201ENST00000368287 RNF217Q8TC41 542 aa8.67□□□□□ -1.02
ECHDC1-201ENST00000368287 KCTD15Q96SI1 283 aaPredicted RBP8.67□□□□□ -1.02
ECHDC1-201ENST00000368287 SPOCK3Q9BQ16 436 aa8.67□□□□□ -1.02
ECHDC1-201ENST00000368287 QPCTQ16769 361 aa8.66□□□□□ -1.02
ECHDC1-201ENST00000368287 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.66□□□□□ -1.02
ECHDC1-201ENST00000368287 PARP9Q8IXQ6 854 aa8.66□□□□□ -1.02
ECHDC1-201ENST00000368287 SLC10A4Q96EP9 437 aa8.66□□□□□ -1.02
ECHDC1-201ENST00000368287 DCAF5Q96JK2 942 aa8.66□□□□□ -1.02
ECHDC1-201ENST00000368287 CDV3Q9UKY7 258 aaKnown RBP8.66□□□□□ -1.02
ECHDC1-201ENST00000368287 SENP3-EIF4A1A0A087X0R7 540 aa8.65□□□□□ -1.02
ECHDC1-201ENST00000368287 GAS6Q14393 721 aa8.64□□□□□ -1.03
ECHDC1-201ENST00000368287 PODNQ7Z5L7 613 aa8.64□□□□□ -1.03
ECHDC1-201ENST00000368287 GALNT6Q8NCL4 622 aa8.64□□□□□ -1.03
ECHDC1-201ENST00000368287 ARHGAP9Q9BRR9 750 aa8.64□□□□□ -1.03
ECHDC1-201ENST00000368287 ZNF395Q9H8N7 513 aaPredicted RBP8.64□□□□□ -1.03
ECHDC1-201ENST00000368287 LIMD1Q9UGP4 676 aa8.64□□□□□ -1.03
ECHDC1-201ENST00000368287 CNTNAP5Q8WYK1 1306 aa8.63□□□□□ -1.03
ECHDC1-201ENST00000368287 LILRB3O75022 631 aa8.62□□□□□ -1.03
ECHDC1-201ENST00000368287 ZMYND10O75800 440 aa8.62□□□□□ -1.03
ECHDC1-201ENST00000368287 INTS6LQ5JSJ4 861 aaKnown RBP8.62□□□□□ -1.03
ECHDC1-201ENST00000368287 BEND7Q8N7W2 519 aaPredicted RBP8.62□□□□□ -1.03
ECHDC1-201ENST00000368287 TUSC1Q2TAM9 212 aa8.61□□□□□ -1.03
ECHDC1-201ENST00000368287 PDXDC2PQ6P474 469 aa8.61□□□□□ -1.03
ECHDC1-201ENST00000368287 NEDD1Q8NHV4 660 aa8.61□□□□□ -1.03
ECHDC1-201ENST00000368287 CUEDC1Q9NWM3 386 aaPredicted RBP8.61□□□□□ -1.03
ECHDC1-201ENST00000368287 ITGB2P05107 769 aa8.6□□□□□ -1.03
ECHDC1-201ENST00000368287 MYSM1Q5VVJ2 828 aa8.6□□□□□ -1.03
ECHDC1-201ENST00000368287 ZBTB33Q86T24 672 aa8.6□□□□□ -1.03
ECHDC1-201ENST00000368287 MBIPQ9NS73 344 aa8.6□□□□□ -1.03
ECHDC1-201ENST00000368287 PROCP04070 461 aa8.59□□□□□ -1.03
ECHDC1-201ENST00000368287 RTL5Q5HYW3 569 aaPredicted RBP8.59□□□□□ -1.03
ECHDC1-201ENST00000368287 FOXD4L5Q5VV16 416 aaPredicted RBP8.59□□□□□ -1.03
ECHDC1-201ENST00000368287 FOXR1Q6PIV2 292 aa8.58□□□□□ -1.04
ECHDC1-201ENST00000368287 LYSMD3Q7Z3D4 306 aa8.58□□□□□ -1.04
ECHDC1-201ENST00000368287 IGF1RP08069 1367 aa8.58□□□□□ -1.04
ECHDC1-201ENST00000368287 K7ELQ4 463 aaPredicted RBP8.57□□□□□ -1.04
ECHDC1-201ENST00000368287 ADH1AP07327 375 aa8.57□□□□□ -1.04
ECHDC1-201ENST00000368287 BCRP11274 1271 aa8.57□□□□□ -1.04
ECHDC1-201ENST00000368287 GPR25O00155 361 aa8.56□□□□□ -1.04
ECHDC1-201ENST00000368287 ZNF784Q8NCA9 323 aaPredicted RBP8.56□□□□□ -1.04
ECHDC1-201ENST00000368287 ZNF837Q96EG3 531 aaPredicted RBP8.56□□□□□ -1.04
ECHDC1-201ENST00000368287 TMPRSS4Q9NRS4 437 aa8.56□□□□□ -1.04
ECHDC1-201ENST00000368287 FKBPLQ9UIM3 349 aa8.56□□□□□ -1.04
ECHDC1-201ENST00000368287 TRIM66O15016 1216 aa8.55□□□□□ -1.04
ECHDC1-201ENST00000368287 PTGIRP43119 386 aa8.55□□□□□ -1.04
ECHDC1-201ENST00000368287 RAB15P59190 212 aa8.55□□□□□ -1.04
ECHDC1-201ENST00000368287 ZC3H15Q8WU90 426 aaKnown RBP8.55□□□□□ -1.04
ECHDC1-201ENST00000368287 GMCL1Q96IK5 515 aa8.55□□□□□ -1.04
ECHDC1-201ENST00000368287 KRTAP4-8Q9BYQ9 185 aa8.55□□□□□ -1.04
ECHDC1-201ENST00000368287 RHOQP17081 205 aa8.54□□□□□ -1.04
ECHDC1-201ENST00000368287 NBPF20Q3BBV1 942 aa8.54□□□□□ -1.04
ECHDC1-201ENST00000368287 PRICKLE2Q7Z3G6 844 aa8.54□□□□□ -1.04
ECHDC1-201ENST00000368287 TRIM22Q8IYM9 498 aa8.54□□□□□ -1.04
ECHDC1-201ENST00000368287 CLK2P49760 499 aaKnown RBP8.53□□□□□ -1.04
ECHDC1-201ENST00000368287 PTK2Q05397 1052 aa8.53□□□□□ -1.04
ECHDC1-201ENST00000368287 CTDSPL2Q05D32 466 aa8.53□□□□□ -1.04
ECHDC1-201ENST00000368287 VSIG10Q8N0Z9 540 aa8.53□□□□□ -1.04
ECHDC1-201ENST00000368287 ZC3H4Q9UPT8 1303 aaKnown RBP8.53□□□□□ -1.04
ECHDC1-201ENST00000368287 RIPOR1Q6ZS17 1223 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms