RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 EVA1CP58658 441 aa13.74□□□□□ -0.21
CD48-202ENST00000368046 CPDO75976 1380 aa13.73□□□□□ -0.21
CD48-202ENST00000368046 HSPA5P11021 654 aaKnown RBP13.73□□□□□ -0.21
CD48-202ENST00000368046 CD163L1Q9NR16 1453 aa13.73□□□□□ -0.21
CD48-202ENST00000368046 A0A1W2PP64 1363 aa13.71□□□□□ -0.21
CD48-202ENST00000368046 ARHGEF25Q86VW2 580 aa13.71□□□□□ -0.21
CD48-202ENST00000368046 NME9Q86XW9 330 aa13.71□□□□□ -0.21
CD48-202ENST00000368046 UPF1Q92900 1129 aaKnown RBP eCLIP13.71□□□□□ -0.21
CD48-202ENST00000368046 STRN4Q9NRL3 753 aa13.71□□□□□ -0.21
CD48-202ENST00000368046 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
CD48-202ENST00000368046 RGS12O14924 1447 aa13.71□□□□□ -0.22
CD48-202ENST00000368046 EDC4Q6P2E9 1401 aaKnown RBP13.71□□□□□ -0.22
CD48-202ENST00000368046 USP31Q70CQ4 1352 aa13.71□□□□□ -0.22
CD48-202ENST00000368046 SPATA31A5Q5VU36 1347 aa13.7□□□□□ -0.22
CD48-202ENST00000368046 SPATA31A7Q8IWB4 1347 aa13.7□□□□□ -0.22
CD48-202ENST00000368046 SEPT12Q8IYM1 358 aa13.7□□□□□ -0.22
CD48-202ENST00000368046 ABCA3Q99758 1704 aa13.7□□□□□ -0.22
CD48-202ENST00000368046 COL14A1Q05707 1796 aaKnown RBP13.69□□□□□ -0.22
CD48-202ENST00000368046 ZBTB7CA1YPR0 619 aa13.69□□□□□ -0.22
CD48-202ENST00000368046 CRYBG1Q9Y4K1 1723 aa13.69□□□□□ -0.22
CD48-202ENST00000368046 AATKQ6ZMQ8 1374 aa13.69□□□□□ -0.22
CD48-202ENST00000368046 ANKRD36BQ8N2N9 1353 aa13.69□□□□□ -0.22
CD48-202ENST00000368046 NWD2Q9ULI1 1742 aa13.68□□□□□ -0.22
CD48-202ENST00000368046 SOX12O15370 315 aa13.68□□□□□ -0.22
CD48-202ENST00000368046 FAM98CQ17RN3 349 aaKnown RBP13.68□□□□□ -0.22
CD48-202ENST00000368046 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
CD48-202ENST00000368046 SPATA31A1Q5TZJ5 1347 aa13.67□□□□□ -0.22
CD48-202ENST00000368046 AXIN2Q9Y2T1 843 aa13.67□□□□□ -0.22
CD48-202ENST00000368046 SLIT3O75094 1523 aa13.67□□□□□ -0.22
CD48-202ENST00000368046 AKAP12Q02952 1782 aa13.67□□□□□ -0.22
CD48-202ENST00000368046 PHRF1Q9P1Y6 1649 aaKnown RBP13.67□□□□□ -0.22
CD48-202ENST00000368046 FYB1O15117 783 aa13.66□□□□□ -0.22
CD48-202ENST00000368046 LARP1Q6PKG0 1096 aaKnown RBP13.66□□□□□ -0.22
CD48-202ENST00000368046 COG3Q96JB2 828 aa13.66□□□□□ -0.22
CD48-202ENST00000368046 PLSCR2Q9NRY7 297 aa13.66□□□□□ -0.22
CD48-202ENST00000368046 GLI3P10071 1580 aa13.66□□□□□ -0.22
CD48-202ENST00000368046 CAMTA1Q9Y6Y1 1673 aa13.66□□□□□ -0.22
CD48-202ENST00000368046 A0A0G2JS52 829 aa13.65□□□□□ -0.22
CD48-202ENST00000368046 MYT1Q01538 1121 aa13.65□□□□□ -0.22
CD48-202ENST00000368046 POLR3GLQ9BT43 218 aa13.65□□□□□ -0.22
CD48-202ENST00000368046 CARD14Q9BXL6 1004 aa13.65□□□□□ -0.22
CD48-202ENST00000368046 USP35Q9P2H5 1018 aa13.65□□□□□ -0.22
CD48-202ENST00000368046 THRAP3Q9Y2W1 955 aaKnown RBP13.65□□□□□ -0.22
CD48-202ENST00000368046 NRKQ7Z2Y5 1582 aa13.65□□□□□ -0.22
CD48-202ENST00000368046 PIK3C2AO00443 1686 aa13.65□□□□□ -0.22
CD48-202ENST00000368046 PLCH1Q4KWH8 1693 aa13.65□□□□□ -0.22
CD48-202ENST00000368046 BARGINQ6ZT62 677 aa13.64□□□□□ -0.23
CD48-202ENST00000368046 KRT27Q7Z3Y8 459 aa13.64□□□□□ -0.23
CD48-202ENST00000368046 CCDC125Q86Z20 511 aa13.64□□□□□ -0.23
CD48-202ENST00000368046 TCP11L2Q8N4U5 519 aa13.64□□□□□ -0.23
CD48-202ENST00000368046 C11orf95C9JLR9 678 aaPredicted RBP13.63□□□□□ -0.23
CD48-202ENST00000368046 MON2Q7Z3U7 1717 aa13.63□□□□□ -0.23
CD48-202ENST00000368046 TOM1L2Q6ZVM7 507 aa13.62□□□□□ -0.23
CD48-202ENST00000368046 GGNBP2Q9H3C7 697 aa13.62□□□□□ -0.23
CD48-202ENST00000368046 WDR17Q8IZU2 1322 aa13.62□□□□□ -0.23
CD48-202ENST00000368046 ATXN8OSP0DMR3 200 aa13.61□□□□□ -0.23
CD48-202ENST00000368046 CSB-PGBD3P0DP91 1061 aa13.61□□□□□ -0.23
CD48-202ENST00000368046 CHADLQ6NUI6 762 aa13.61□□□□□ -0.23
CD48-202ENST00000368046 OVOS2A0A0J9YW53 1432 aa13.61□□□□□ -0.23
CD48-202ENST00000368046 OVOS2Q6IE36 1432 aa13.61□□□□□ -0.23
CD48-202ENST00000368046 NRAPQ86VF7 1730 aa13.61□□□□□ -0.23
CD48-202ENST00000368046 COL5A2P05997 1499 aaPredicted RBP13.61□□□□□ -0.23
CD48-202ENST00000368046 CRB1P82279 1406 aa13.6□□□□□ -0.23
CD48-202ENST00000368046 IP6K1Q92551 441 aa13.6□□□□□ -0.23
CD48-202ENST00000368046 CARD10Q9BWT7 1032 aa13.6□□□□□ -0.23
CD48-202ENST00000368046 LMO7Q8WWI1 1683 aa13.59□□□□□ -0.23
CD48-202ENST00000368046 FBLN1P23142 703 aa13.59□□□□□ -0.23
CD48-202ENST00000368046 PDE3BQ13370 1112 aa13.59□□□□□ -0.23
CD48-202ENST00000368046 PANK3Q9H999 370 aa13.59□□□□□ -0.23
CD48-202ENST00000368046 NFAT5O94916 1531 aa13.59□□□□□ -0.23
CD48-202ENST00000368046 AMPHP49418 695 aa13.58□□□□□ -0.24
CD48-202ENST00000368046 CGNL1Q0VF96 1302 aa13.58□□□□□ -0.24
CD48-202ENST00000368046 ANKRD24Q8TF21 1146 aa13.57□□□□□ -0.24
CD48-202ENST00000368046 CDCA7Q9BWT1 371 aaPredicted RBP13.57□□□□□ -0.24
CD48-202ENST00000368046 MAP3K19Q56UN5 1328 aa13.57□□□□□ -0.24
CD48-202ENST00000368046 NSD3Q9BZ95 1437 aa13.56□□□□□ -0.24
CD48-202ENST00000368046 COL18A1P39060 1754 aa13.56□□□□□ -0.24
CD48-202ENST00000368046 NLRP2Q9NX02 1062 aa13.56□□□□□ -0.24
CD48-202ENST00000368046 ERBB3P21860 1342 aa13.56□□□□□ -0.24
CD48-202ENST00000368046 HOXC9P31274 260 aa13.55□□□□□ -0.24
CD48-202ENST00000368046 RRS1Q15050 365 aaKnown RBP13.55□□□□□ -0.24
CD48-202ENST00000368046 FAM182BQ5T319 152 aa13.55□□□□□ -0.24
CD48-202ENST00000368046 FAM196AQ6ZSG2 479 aa13.55□□□□□ -0.24
CD48-202ENST00000368046 USP54Q70EL1 1684 aa13.55□□□□□ -0.24
CD48-202ENST00000368046 EXOC5O00471 708 aa13.54□□□□□ -0.24
CD48-202ENST00000368046 SF3B2Q13435 895 aaKnown RBP13.54□□□□□ -0.24
CD48-202ENST00000368046 DDB1Q16531 1140 aa13.54□□□□□ -0.24
CD48-202ENST00000368046 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
CD48-202ENST00000368046 KIF7Q2M1P5 1343 aa13.54□□□□□ -0.24
CD48-202ENST00000368046 CCDC7Q96M83 1385 aa13.54□□□□□ -0.24
CD48-202ENST00000368046 BLMP54132 1417 aaPredicted RBP13.54□□□□□ -0.24
CD48-202ENST00000368046 ABCC6O95255 1503 aa13.54□□□□□ -0.24
CD48-202ENST00000368046 POTEIP0CG38 1075 aa13.53□□□□□ -0.24
CD48-202ENST00000368046 LTV1Q96GA3 475 aaPredicted RBP13.53□□□□□ -0.24
CD48-202ENST00000368046 KNSTRNQ9Y448 316 aa13.53□□□□□ -0.24
CD48-202ENST00000368046 MYOM1P52179 1685 aa13.51□□□□□ -0.25
CD48-202ENST00000368046 THSD7AQ9UPZ6 1657 aa13.51□□□□□ -0.25
CD48-202ENST00000368046 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
CD48-202ENST00000368046 BRWD3Q6RI45 1802 aa13.5□□□□□ -0.25
CD48-202ENST00000368046 IL2RBP14784 551 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms