RNA–Protein interactions for RNA: ENST00000365477.1

RNU1-16P-201, Transcript of RNA, U1 small nuclear 16, pseudogene, humanhuman

BASIC

Gene RNU1-16P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-16P-201ENST00000365477 KCNH5Q8NCM2 988 aa10.63□□□□□ -0.71
RNU1-16P-201ENST00000365477 COL5A2P05997 1499 aaPredicted RBP10.62□□□□□ -0.71
RNU1-16P-201ENST00000365477 SPATA31A1Q5TZJ5 1347 aa10.62□□□□□ -0.71
RNU1-16P-201ENST00000365477 COG3Q96JB2 828 aa10.62□□□□□ -0.71
RNU1-16P-201ENST00000365477 AATKQ6ZMQ8 1374 aa10.62□□□□□ -0.71
RNU1-16P-201ENST00000365477 KIF7Q2M1P5 1343 aa10.61□□□□□ -0.71
RNU1-16P-201ENST00000365477 UPF1Q92900 1129 aaKnown RBP eCLIP10.61□□□□□ -0.71
RNU1-16P-201ENST00000365477 PANK3Q9H999 370 aa10.61□□□□□ -0.71
RNU1-16P-201ENST00000365477 COL18A1P39060 1754 aa10.6□□□□□ -0.71
RNU1-16P-201ENST00000365477 CSB-PGBD3P0DP91 1061 aa10.6□□□□□ -0.71
RNU1-16P-201ENST00000365477 RRS1Q15050 365 aaKnown RBP10.6□□□□□ -0.71
RNU1-16P-201ENST00000365477 TOM1L2Q6ZVM7 507 aa10.6□□□□□ -0.71
RNU1-16P-201ENST00000365477 LTV1Q96GA3 475 aaPredicted RBP10.6□□□□□ -0.71
RNU1-16P-201ENST00000365477 USP54Q70EL1 1684 aa10.6□□□□□ -0.71
RNU1-16P-201ENST00000365477 MAP3K19Q56UN5 1328 aa10.59□□□□□ -0.71
RNU1-16P-201ENST00000365477 TNNT2P45379 298 aaPredicted RBP10.59□□□□□ -0.71
RNU1-16P-201ENST00000365477 CNGB1Q14028 1251 aaPredicted RBP10.59□□□□□ -0.71
RNU1-16P-201ENST00000365477 RGPD5Q99666 1765 aa10.59□□□□□ -0.71
RNU1-16P-201ENST00000365477 BRWD3Q6RI45 1802 aa10.58□□□□□ -0.72
RNU1-16P-201ENST00000365477 ONECUT3O60422 494 aaPredicted RBP10.58□□□□□ -0.72
RNU1-16P-201ENST00000365477 KRT27Q7Z3Y8 459 aa10.58□□□□□ -0.72
RNU1-16P-201ENST00000365477 TCP11L2Q8N4U5 519 aa10.58□□□□□ -0.72
RNU1-16P-201ENST00000365477 CRB1P82279 1406 aa10.58□□□□□ -0.72
RNU1-16P-201ENST00000365477 WDR17Q8IZU2 1322 aa10.58□□□□□ -0.72
RNU1-16P-201ENST00000365477 LTN1O94822 1766 aa10.57□□□□□ -0.72
RNU1-16P-201ENST00000365477 KIF20BQ96Q89 1820 aa10.57□□□□□ -0.72
RNU1-16P-201ENST00000365477 AMPHP49418 695 aa10.57□□□□□ -0.72
RNU1-16P-201ENST00000365477 ANKRD24Q8TF21 1146 aa10.57□□□□□ -0.72
RNU1-16P-201ENST00000365477 WASHC2AQ641Q2 1341 aa10.57□□□□□ -0.72
RNU1-16P-201ENST00000365477 CCDC7Q96M83 1385 aa10.56□□□□□ -0.72
RNU1-16P-201ENST00000365477 PPM1GO15355 546 aaPredicted RBP10.56□□□□□ -0.72
RNU1-16P-201ENST00000365477 NLRP2Q9NX02 1062 aa10.56□□□□□ -0.72
RNU1-16P-201ENST00000365477 EMILIN1Q9Y6C2 1016 aa10.56□□□□□ -0.72
RNU1-16P-201ENST00000365477 THSD7AQ9UPZ6 1657 aa10.56□□□□□ -0.72
RNU1-16P-201ENST00000365477 CGNL1Q0VF96 1302 aa10.56□□□□□ -0.72
RNU1-16P-201ENST00000365477 HOXC9P31274 260 aa10.55□□□□□ -0.72
RNU1-16P-201ENST00000365477 IP6K1Q92551 441 aa10.55□□□□□ -0.72
RNU1-16P-201ENST00000365477 ERBB3P21860 1342 aa10.55□□□□□ -0.72
RNU1-16P-201ENST00000365477 EP400Q96L91 3159 aa10.54□□□□□ -0.72
RNU1-16P-201ENST00000365477 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
RNU1-16P-201ENST00000365477 CARD10Q9BWT7 1032 aa10.54□□□□□ -0.72
RNU1-16P-201ENST00000365477 PEAK1Q9H792 1746 aa10.53□□□□□ -0.72
RNU1-16P-201ENST00000365477 PDE3BQ13370 1112 aa10.53□□□□□ -0.72
RNU1-16P-201ENST00000365477 HSP90AB2PQ58FF8 381 aa10.53□□□□□ -0.72
RNU1-16P-201ENST00000365477 USHBP1Q8N6Y0 703 aa10.53□□□□□ -0.72
RNU1-16P-201ENST00000365477 DEFB132Q7Z7B7 95 aa10.52□□□□□ -0.73
RNU1-16P-201ENST00000365477 THRAP3Q9Y2W1 955 aaKnown RBP10.52□□□□□ -0.73
RNU1-16P-201ENST00000365477 KNSTRNQ9Y448 316 aa10.52□□□□□ -0.73
RNU1-16P-201ENST00000365477 BLMP54132 1417 aaPredicted RBP10.51□□□□□ -0.73
RNU1-16P-201ENST00000365477 CC2D1BQ5T0F9 858 aaKnown RBP10.51□□□□□ -0.73
RNU1-16P-201ENST00000365477 MORC1Q86VD1 984 aa10.51□□□□□ -0.73
RNU1-16P-201ENST00000365477 POLKQ9UBT6 870 aa10.51□□□□□ -0.73
RNU1-16P-201ENST00000365477 ABCC6O95255 1503 aa10.51□□□□□ -0.73
RNU1-16P-201ENST00000365477 LRRC37A3O60309 1634 aa10.51□□□□□ -0.73
RNU1-16P-201ENST00000365477 DISP2A7MBM2 1401 aa10.5□□□□□ -0.73
RNU1-16P-201ENST00000365477 TRIM37O94972 964 aa10.5□□□□□ -0.73
RNU1-16P-201ENST00000365477 DDB1Q16531 1140 aa10.5□□□□□ -0.73
RNU1-16P-201ENST00000365477 AMER1Q5JTC6 1135 aaPredicted RBP10.5□□□□□ -0.73
RNU1-16P-201ENST00000365477 NBPF6Q5VWK0 638 aa10.5□□□□□ -0.73
RNU1-16P-201ENST00000365477 NBPF4Q96M43 638 aa10.5□□□□□ -0.73
RNU1-16P-201ENST00000365477 RTL1A6NKG5 1358 aa10.5□□□□□ -0.73
RNU1-16P-201ENST00000365477 PER1O15534 1290 aaPredicted RBP10.49□□□□□ -0.73
RNU1-16P-201ENST00000365477 PTF1AQ7RTS3 328 aa10.49□□□□□ -0.73
RNU1-16P-201ENST00000365477 MARCH10Q8NA82 808 aaPredicted RBP10.49□□□□□ -0.73
RNU1-16P-201ENST00000365477 FLT4P35916 1363 aa10.49□□□□□ -0.73
RNU1-16P-201ENST00000365477 RGPD2P0DJD1 1756 aa10.49□□□□□ -0.73
RNU1-16P-201ENST00000365477 WNK3Q9BYP7 1800 aa10.49□□□□□ -0.73
RNU1-16P-201ENST00000365477 PARP4Q9UKK3 1724 aaKnown RBP10.48□□□□□ -0.73
RNU1-16P-201ENST00000365477 ANKRD26Q9UPS8 1709 aa10.48□□□□□ -0.73
RNU1-16P-201ENST00000365477 IL2RBP14784 551 aa10.48□□□□□ -0.73
RNU1-16P-201ENST00000365477 INSRP06213 1382 aa10.48□□□□□ -0.73
RNU1-16P-201ENST00000365477 EXOC5O00471 708 aa10.47□□□□□ -0.73
RNU1-16P-201ENST00000365477 SF3B2Q13435 895 aaKnown RBP10.47□□□□□ -0.73
RNU1-16P-201ENST00000365477 FAM196AQ6ZSG2 479 aa10.47□□□□□ -0.73
RNU1-16P-201ENST00000365477 MEGF6O75095 1541 aa10.47□□□□□ -0.73
RNU1-16P-201ENST00000365477 EN1Q05925 392 aaPredicted RBP10.46□□□□□ -0.73
RNU1-16P-201ENST00000365477 EIF4A2Q14240 407 aaKnown RBP10.46□□□□□ -0.73
RNU1-16P-201ENST00000365477 DDX54Q8TDD1 881 aaKnown RBP10.46□□□□□ -0.73
RNU1-16P-201ENST00000365477 NSD2O96028 1365 aa10.46□□□□□ -0.74
RNU1-16P-201ENST00000365477 SMG6Q86US8 1419 aaKnown RBP10.46□□□□□ -0.74
RNU1-16P-201ENST00000365477 FAM208AQ9UK61 1670 aaKnown RBP10.46□□□□□ -0.74
RNU1-16P-201ENST00000365477 TNS2Q63HR2 1409 aa10.45□□□□□ -0.74
RNU1-16P-201ENST00000365477 APBA3O96018 575 aa10.45□□□□□ -0.74
RNU1-16P-201ENST00000365477 ACSBG1Q96GR2 724 aa10.45□□□□□ -0.74
RNU1-16P-201ENST00000365477 CDCA7Q9BWT1 371 aaPredicted RBP10.45□□□□□ -0.74
RNU1-16P-201ENST00000365477 MAP2P11137 1827 aaKnown RBP10.44□□□□□ -0.74
RNU1-16P-201ENST00000365477 OVOS2A0A0G2JMS6 1433 aa10.44□□□□□ -0.74
RNU1-16P-201ENST00000365477 KCNQ2O43526 872 aa10.44□□□□□ -0.74
RNU1-16P-201ENST00000365477 CCDC125Q86Z20 511 aa10.44□□□□□ -0.74
RNU1-16P-201ENST00000365477 EYA1Q99502 592 aa10.44□□□□□ -0.74
RNU1-16P-201ENST00000365477 KIF24Q5T7B8 1368 aa10.43□□□□□ -0.74
RNU1-16P-201ENST00000365477 MTHFSP49914 203 aa10.43□□□□□ -0.74
RNU1-16P-201ENST00000365477 EZH2Q15910 746 aaKnown RBP10.43□□□□□ -0.74
RNU1-16P-201ENST00000365477 RAPGEF4Q8WZA2 1011 aa10.43□□□□□ -0.74
RNU1-16P-201ENST00000365477 TNS1Q9HBL0 1735 aaKnown RBP10.43□□□□□ -0.74
RNU1-16P-201ENST00000365477 TATP17735 454 aaPredicted RBP10.42□□□□□ -0.74
RNU1-16P-201ENST00000365477 BAG6P46379 1132 aa10.42□□□□□ -0.74
RNU1-16P-201ENST00000365477 DDX10Q13206 875 aaKnown RBP10.42□□□□□ -0.74
RNU1-16P-201ENST00000365477 AEBP1Q8IUX7 1158 aa10.42□□□□□ -0.74
RNU1-16P-201ENST00000365477 ZCRB1Q8TBF4 217 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms