RNA–Protein interactions for RNA: ENST00000362552.1

VTRNA3-1P-201, Transcript of vault RNA 3-1, pseudogene, humanhuman

BASIC

Gene VTRNA3-1P, Length 102 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA3-1P-201ENST00000362552 NRKQ7Z2Y5 1582 aa8.85□□□□□ -0.99
VTRNA3-1P-201ENST00000362552 FLT4P35916 1363 aa8.85□□□□□ -0.99
VTRNA3-1P-201ENST00000362552 SLIT3O75094 1523 aa8.85□□□□□ -0.99
VTRNA3-1P-201ENST00000362552 PIK3C2AO00443 1686 aa8.85□□□□□ -0.99
VTRNA3-1P-201ENST00000362552 U2SURPO15042 1029 aaKnown RBP8.84□□□□□ -0.99
VTRNA3-1P-201ENST00000362552 SMG6Q86US8 1419 aaKnown RBP8.84□□□□□ -0.99
VTRNA3-1P-201ENST00000362552 PNNQ9H307 717 aaKnown RBP8.84□□□□□ -0.99
VTRNA3-1P-201ENST00000362552 NLRP2Q9NX02 1062 aa8.84□□□□□ -0.99
VTRNA3-1P-201ENST00000362552 AXIN2Q9Y2T1 843 aa8.84□□□□□ -0.99
VTRNA3-1P-201ENST00000362552 RTL1A6NKG5 1358 aa8.84□□□□□ -0.99
VTRNA3-1P-201ENST00000362552 AFF2P51816 1311 aa8.83□□□□□ -1
VTRNA3-1P-201ENST00000362552 KIF20BQ96Q89 1820 aa8.83□□□□□ -1
VTRNA3-1P-201ENST00000362552 NEFMP07197 916 aa8.83□□□□□ -1
VTRNA3-1P-201ENST00000362552 WDR43Q15061 677 aaKnown RBP eCLIP8.83□□□□□ -1
VTRNA3-1P-201ENST00000362552 QTRT2Q9H974 415 aaKnown RBP8.83□□□□□ -1
VTRNA3-1P-201ENST00000362552 MRS2Q9HD23 443 aa8.83□□□□□ -1
VTRNA3-1P-201ENST00000362552 TRPC5Q9UL62 973 aaPredicted RBP8.83□□□□□ -1
VTRNA3-1P-201ENST00000362552 SHPRHQ149N8 1683 aa8.83□□□□□ -1
VTRNA3-1P-201ENST00000362552 INSRP06213 1382 aa8.83□□□□□ -1
VTRNA3-1P-201ENST00000362552 COL22A1Q8NFW1 1626 aaPredicted RBP8.83□□□□□ -1
VTRNA3-1P-201ENST00000362552 BLMP54132 1417 aaPredicted RBP8.82□□□□□ -1
VTRNA3-1P-201ENST00000362552 CCER2I3L3R5 266 aa8.82□□□□□ -1
VTRNA3-1P-201ENST00000362552 EIF4A2Q14240 407 aaKnown RBP8.82□□□□□ -1
VTRNA3-1P-201ENST00000362552 U2AF1L5P0DN76 240 aaPredicted RBP8.81□□□□□ -1
VTRNA3-1P-201ENST00000362552 IL13P35225 146 aa8.81□□□□□ -1
VTRNA3-1P-201ENST00000362552 U2AF1Q01081 240 aaKnown RBP eCLIP8.81□□□□□ -1
VTRNA3-1P-201ENST00000362552 VPS72Q15906 364 aa8.81□□□□□ -1
VTRNA3-1P-201ENST00000362552 LARP1Q6PKG0 1096 aaKnown RBP8.81□□□□□ -1
VTRNA3-1P-201ENST00000362552 MIER1Q8N108 512 aa8.81□□□□□ -1
VTRNA3-1P-201ENST00000362552 CARD10Q9BWT7 1032 aa8.81□□□□□ -1
VTRNA3-1P-201ENST00000362552 USP35Q9P2H5 1018 aa8.81□□□□□ -1
VTRNA3-1P-201ENST00000362552 WDR17Q8IZU2 1322 aa8.8□□□□□ -1
VTRNA3-1P-201ENST00000362552 NFAT5O94916 1531 aa8.8□□□□□ -1
VTRNA3-1P-201ENST00000362552 A0A0G2JS52 829 aa8.8□□□□□ -1
VTRNA3-1P-201ENST00000362552 MYT1Q01538 1121 aa8.8□□□□□ -1
VTRNA3-1P-201ENST00000362552 TCP11L2Q8N4U5 519 aa8.8□□□□□ -1
VTRNA3-1P-201ENST00000362552 RAPGEF4Q8WZA2 1011 aa8.8□□□□□ -1
VTRNA3-1P-201ENST00000362552 THRAP3Q9Y2W1 955 aaKnown RBP8.8□□□□□ -1
VTRNA3-1P-201ENST00000362552 ERBB3P21860 1342 aa8.8□□□□□ -1
VTRNA3-1P-201ENST00000362552 TATP17735 454 aaPredicted RBP8.79□□□□□ -1
VTRNA3-1P-201ENST00000362552 RXRBP28702 533 aa8.79□□□□□ -1
VTRNA3-1P-201ENST00000362552 NBPF6Q5VWK0 638 aa8.79□□□□□ -1
VTRNA3-1P-201ENST00000362552 SULT6B1Q6IMI4 303 aa8.79□□□□□ -1
VTRNA3-1P-201ENST00000362552 GJD4Q96KN9 370 aaPredicted RBP8.79□□□□□ -1
VTRNA3-1P-201ENST00000362552 NBPF4Q96M43 638 aa8.79□□□□□ -1
VTRNA3-1P-201ENST00000362552 EYA1Q99502 592 aa8.79□□□□□ -1
VTRNA3-1P-201ENST00000362552 CDCA7Q9BWT1 371 aaPredicted RBP8.79□□□□□ -1
VTRNA3-1P-201ENST00000362552 LRP6O75581 1613 aa8.79□□□□□ -1
VTRNA3-1P-201ENST00000362552 USP54Q70EL1 1684 aa8.78□□□□□ -1
VTRNA3-1P-201ENST00000362552 CDK12Q9NYV4 1490 aaPredicted RBP8.78□□□□□ -1
VTRNA3-1P-201ENST00000362552 ANKRD26Q9UPS8 1709 aa8.78□□□□□ -1
VTRNA3-1P-201ENST00000362552 FCHSD2O94868 740 aa8.78□□□□□ -1
VTRNA3-1P-201ENST00000362552 RBM6P78332 1123 aaKnown RBP8.78□□□□□ -1
VTRNA3-1P-201ENST00000362552 PHRF1Q9P1Y6 1649 aaKnown RBP8.78□□□□□ -1
VTRNA3-1P-201ENST00000362552 SLIT2O94813 1529 aa8.78□□□□□ -1
VTRNA3-1P-201ENST00000362552 COL14A1Q05707 1796 aaKnown RBP8.78□□□□□ -1
VTRNA3-1P-201ENST00000362552 SPATA31A1Q5TZJ5 1347 aa8.78□□□□□ -1
VTRNA3-1P-201ENST00000362552 SPATA31A5Q5VU36 1347 aa8.78□□□□□ -1
VTRNA3-1P-201ENST00000362552 SPATA31A7Q8IWB4 1347 aa8.78□□□□□ -1
VTRNA3-1P-201ENST00000362552 ABCC6O95255 1503 aa8.77□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 EXOC5O00471 708 aa8.77□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 HMOX1P09601 288 aa8.77□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 IL2RBP14784 551 aa8.77□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 PLEKHO1Q53GL0 409 aaPredicted RBP8.77□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 FAM9BQ8IZU0 186 aa8.77□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 USHBP1Q8N6Y0 703 aa8.77□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 CAMTA1Q9Y6Y1 1673 aa8.77□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 CRB1P82279 1406 aa8.77□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 MAPK8IP3Q9UPT6 1336 aa8.77□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 COL5A2P05997 1499 aaPredicted RBP8.77□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 PDE3BQ13370 1112 aa8.76□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 FAM98CQ17RN3 349 aaKnown RBP8.76□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 AMOTQ4VCS5 1084 aa8.76□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 BARGINQ6ZT62 677 aa8.76□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 PNISRQ8TF01 805 aaKnown RBP8.76□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 SPG7Q9UQ90 795 aa8.76□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 BCL9LQ86UU0 1499 aa8.76□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 MAP2P11137 1827 aaKnown RBP8.75□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 DDB1Q16531 1140 aa8.75□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 CCDC184Q52MB2 194 aa8.75□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 ZCRB1Q8TBF4 217 aaKnown RBP8.75□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 ADAMTS8Q9UP79 889 aa8.75□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 IGSF1Q8N6C5 1336 aa8.75□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 MARF1Q9Y4F3 1742 aaKnown RBP8.74□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 PRKAR2BP31323 418 aa8.74□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 C1orf141Q5JVX7 400 aa8.74□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 RUNDC1Q96C34 613 aa8.74□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 ABCA3Q99758 1704 aa8.74□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 CRYBG1Q9Y4K1 1723 aa8.74□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 LTN1O94822 1766 aa8.73□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 ATRNO75882 1429 aa8.73□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 POTEAQ6S8J7 498 aa8.73□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 AEBP1Q8IUX7 1158 aa8.73□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 SEPT12Q8IYM1 358 aa8.73□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 GAS2L2Q8NHY3 880 aa8.73□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 DDX54Q8TDD1 881 aaKnown RBP8.73□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.73□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 RGS17Q9UGC6 210 aaPredicted RBP8.73□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 COL18A1P39060 1754 aa8.72□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 ONECUT3O60422 494 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms