RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 ANKRD26Q9UPS8 1709 aa9.12□□□□□ -0.95
CDC42SE2-201ENST00000360515 SLC15A2Q16348 729 aa9.11□□□□□ -0.95
CDC42SE2-201ENST00000360515 PRAM1Q96QH2 718 aa9.11□□□□□ -0.95
CDC42SE2-201ENST00000360515 AKT1S1Q96B36 256 aa9.11□□□□□ -0.95
CDC42SE2-201ENST00000360515 WDR17Q8IZU2 1322 aa9.1□□□□□ -0.95
CDC42SE2-201ENST00000360515 PXDNLA1KZ92 1463 aa9.09□□□□□ -0.95
CDC42SE2-201ENST00000360515 DLEC1Q9Y238 1755 aa9.09□□□□□ -0.95
CDC42SE2-201ENST00000360515 NSD2O96028 1365 aa9.09□□□□□ -0.95
CDC42SE2-201ENST00000360515 HMGB2P26583 209 aaKnown RBP9.09□□□□□ -0.95
CDC42SE2-201ENST00000360515 CARD10Q9BWT7 1032 aa9.09□□□□□ -0.95
CDC42SE2-201ENST00000360515 PRDM11Q9NQV5 511 aa9.09□□□□□ -0.95
CDC42SE2-201ENST00000360515 PPIP5K1Q6PFW1 1433 aa9.08□□□□□ -0.96
CDC42SE2-201ENST00000360515 PDE3BQ13370 1112 aa9.07□□□□□ -0.96
CDC42SE2-201ENST00000360515 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
CDC42SE2-201ENST00000360515 NCAPD2Q15021 1401 aa9.07□□□□□ -0.96
CDC42SE2-201ENST00000360515 SBNO2Q9Y2G9 1366 aa9.07□□□□□ -0.96
CDC42SE2-201ENST00000360515 TMEM132EQ6IEE7 984 aa9.07□□□□□ -0.96
CDC42SE2-201ENST00000360515 LARP1Q6PKG0 1096 aaKnown RBP9.07□□□□□ -0.96
CDC42SE2-201ENST00000360515 SLC4A1APQ9BWU0 796 aaKnown RBP9.07□□□□□ -0.96
CDC42SE2-201ENST00000360515 COL5A3P25940 1745 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE2-201ENST00000360515 MPHOSPH9Q99550 1183 aa9.06□□□□□ -0.96
CDC42SE2-201ENST00000360515 FHDC1Q9C0D6 1143 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE2-201ENST00000360515 SENP3-EIF4A1A0A087X0R7 540 aa9.06□□□□□ -0.96
CDC42SE2-201ENST00000360515 GIGYF1O75420 1035 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE2-201ENST00000360515 MARCH10Q8NA82 808 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE2-201ENST00000360515 CFAP70Q5T0N1 1121 aa9.05□□□□□ -0.96
CDC42SE2-201ENST00000360515 JMYQ8N9B5 988 aa9.05□□□□□ -0.96
CDC42SE2-201ENST00000360515 NUDT16Q96DE0 195 aaKnown RBP9.05□□□□□ -0.96
CDC42SE2-201ENST00000360515 STK32BQ9NY57 414 aa9.05□□□□□ -0.96
CDC42SE2-201ENST00000360515 PPP1R1BQ9UD71 204 aaPredicted RBP9.05□□□□□ -0.96
CDC42SE2-201ENST00000360515 THSD7BQ9C0I4 1608 aa9.05□□□□□ -0.96
CDC42SE2-201ENST00000360515 C4BP0C0L5 1744 aa9.05□□□□□ -0.96
CDC42SE2-201ENST00000360515 ITGB4P16144 1822 aa9.05□□□□□ -0.96
CDC42SE2-201ENST00000360515 TXNRD1Q16881 649 aa9.05□□□□□ -0.96
CDC42SE2-201ENST00000360515 CCDC9Q9Y3X0 531 aaKnown RBP9.05□□□□□ -0.96
CDC42SE2-201ENST00000360515 SRCAPQ6ZRS2 3230 aa9.05□□□□□ -0.96
CDC42SE2-201ENST00000360515 GRIN3BO60391 1043 aa9.04□□□□□ -0.96
CDC42SE2-201ENST00000360515 HSPA6P17066 643 aa9.04□□□□□ -0.96
CDC42SE2-201ENST00000360515 HAP1P54257 671 aaPredicted RBP9.04□□□□□ -0.96
CDC42SE2-201ENST00000360515 ARXQ96QS3 562 aa9.04□□□□□ -0.96
CDC42SE2-201ENST00000360515 CCDC61Q9Y6R9 512 aa9.04□□□□□ -0.96
CDC42SE2-201ENST00000360515 LOC105371045A0A1W2PR82 267 aa9.04□□□□□ -0.96
CDC42SE2-201ENST00000360515 ATP10DQ9P241 1426 aa9.04□□□□□ -0.96
CDC42SE2-201ENST00000360515 TTC21AQ8NDW8 1320 aa9.04□□□□□ -0.96
CDC42SE2-201ENST00000360515 NRXN2Q9P2S2 1712 aa9.03□□□□□ -0.96
CDC42SE2-201ENST00000360515 ACEP12821 1306 aa9.03□□□□□ -0.96
CDC42SE2-201ENST00000360515 GCP02774 474 aa9.03□□□□□ -0.96
CDC42SE2-201ENST00000360515 ARHGEF25Q86VW2 580 aa9.03□□□□□ -0.96
CDC42SE2-201ENST00000360515 NLRP13Q86W25 1043 aa9.03□□□□□ -0.96
CDC42SE2-201ENST00000360515 DNAJC5GQ8N7S2 189 aa9.03□□□□□ -0.96
CDC42SE2-201ENST00000360515 CD163L1Q9NR16 1453 aa9.03□□□□□ -0.96
CDC42SE2-201ENST00000360515 ADAMTS7Q9UKP4 1686 aa9.02□□□□□ -0.97
CDC42SE2-201ENST00000360515 VIRMAQ69YN4 1812 aaKnown RBP9.02□□□□□ -0.97
CDC42SE2-201ENST00000360515 SLC34A2O95436 690 aa9.02□□□□□ -0.97
CDC42SE2-201ENST00000360515 STK26Q9P289 416 aa9.02□□□□□ -0.97
CDC42SE2-201ENST00000360515 FAM182BQ5T319 152 aa9.01□□□□□ -0.97
CDC42SE2-201ENST00000360515 SBF1O95248 1867 aa9.01□□□□□ -0.97
CDC42SE2-201ENST00000360515 DDB1Q16531 1140 aa9.01□□□□□ -0.97
CDC42SE2-201ENST00000360515 PMFBP1Q8TBY8 1022 aa9.01□□□□□ -0.97
CDC42SE2-201ENST00000360515 CD2APQ9Y5K6 639 aa9.01□□□□□ -0.97
CDC42SE2-201ENST00000360515 PNPLA7Q6ZV29 1317 aa9.01□□□□□ -0.97
CDC42SE2-201ENST00000360515 ARFGEF2Q9Y6D5 1785 aa9□□□□□ -0.97
CDC42SE2-201ENST00000360515 PUS7Q96PZ0 661 aaKnown RBP9□□□□□ -0.97
CDC42SE2-201ENST00000360515 NSD3Q9BZ95 1437 aa9□□□□□ -0.97
CDC42SE2-201ENST00000360515 ANKRD36BQ8N2N9 1353 aa9□□□□□ -0.97
CDC42SE2-201ENST00000360515 KCNH5Q8NCM2 988 aa8.99□□□□□ -0.97
CDC42SE2-201ENST00000360515 RGPD2P0DJD1 1756 aa8.99□□□□□ -0.97
CDC42SE2-201ENST00000360515 PDGFDQ9GZP0 370 aaPredicted RBP8.99□□□□□ -0.97
CDC42SE2-201ENST00000360515 KDM6AO15550 1401 aaPredicted RBP8.99□□□□□ -0.97
CDC42SE2-201ENST00000360515 APLP1P51693 650 aa8.98□□□□□ -0.97
CDC42SE2-201ENST00000360515 DICER1Q9UPY3 1922 aaKnown RBP8.98□□□□□ -0.97
CDC42SE2-201ENST00000360515 C4AP0C0L4 1744 aa8.98□□□□□ -0.97
CDC42SE2-201ENST00000360515 CDK19Q9BWU1 502 aa8.98□□□□□ -0.97
CDC42SE2-201ENST00000360515 PCDH10Q9P2E7 1040 aa8.98□□□□□ -0.97
CDC42SE2-201ENST00000360515 ZNF827Q17R98 1081 aa8.97□□□□□ -0.97
CDC42SE2-201ENST00000360515 NGDNQ8NEJ9 315 aaKnown RBP8.97□□□□□ -0.97
CDC42SE2-201ENST00000360515 POGKQ9P215 609 aa8.97□□□□□ -0.97
CDC42SE2-201ENST00000360515 CHRNA2Q15822 529 aa8.96□□□□□ -0.97
CDC42SE2-201ENST00000360515 RTL1A6NKG5 1358 aa8.96□□□□□ -0.97
CDC42SE2-201ENST00000360515 EVA1CP58658 441 aa8.96□□□□□ -0.98
CDC42SE2-201ENST00000360515 PTF1AQ7RTS3 328 aa8.96□□□□□ -0.98
CDC42SE2-201ENST00000360515 ZNF692Q9BU19 519 aaPredicted RBP8.96□□□□□ -0.98
CDC42SE2-201ENST00000360515 KIF3CO14782 793 aa8.96□□□□□ -0.98
CDC42SE2-201ENST00000360515 PRELPP51888 382 aa8.96□□□□□ -0.98
CDC42SE2-201ENST00000360515 KIF24Q5T7B8 1368 aa8.95□□□□□ -0.98
CDC42SE2-201ENST00000360515 NUTM2FA1L443 756 aa8.95□□□□□ -0.98
CDC42SE2-201ENST00000360515 KIF20BQ96Q89 1820 aa8.95□□□□□ -0.98
CDC42SE2-201ENST00000360515 YBX3P16989 372 aaKnown RBP eCLIP8.95□□□□□ -0.989e-7■□□□□ 10.7
CDC42SE2-201ENST00000360515 ZBTB7AO95365 584 aa8.94□□□□□ -0.98
CDC42SE2-201ENST00000360515 LRRC4BQ9NT99 713 aa8.94□□□□□ -0.98
CDC42SE2-201ENST00000360515 TIAM2Q8IVF5 1701 aa8.94□□□□□ -0.98
CDC42SE2-201ENST00000360515 AXIN2Q9Y2T1 843 aa8.94□□□□□ -0.98
CDC42SE2-201ENST00000360515 ERBB3P21860 1342 aa8.94□□□□□ -0.98
CDC42SE2-201ENST00000360515 CGNL1Q0VF96 1302 aa8.94□□□□□ -0.98
CDC42SE2-201ENST00000360515 ADAMTSL1Q8N6G6 1762 aa8.94□□□□□ -0.98
CDC42SE2-201ENST00000360515 FLAD1Q8NFF5 587 aa8.93□□□□□ -0.98
CDC42SE2-201ENST00000360515 ZC3H4Q9UPT8 1303 aaKnown RBP8.93□□□□□ -0.98
CDC42SE2-201ENST00000360515 RBM46Q8TBY0 533 aaKnown RBP8.93□□□□□ -0.98
CDC42SE2-201ENST00000360515 STRN4Q9NRL3 753 aa8.93□□□□□ -0.98
CDC42SE2-201ENST00000360515 MINK1Q8N4C8 1332 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms