RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 KIF6Q6ZMV9 814 aa14.37□□□□□ -0.11
SEMA6A-202ENST00000343348 BACH2Q9BYV9 841 aa14.37□□□□□ -0.11
SEMA6A-202ENST00000343348 EIF3JO75822 258 aaKnown RBP14.37□□□□□ -0.11
SEMA6A-202ENST00000343348 WDR33Q9C0J8 1336 aaKnown RBP14.37□□□□□ -0.11
SEMA6A-202ENST00000343348 SSBP05455 408 aaKnown RBP eCLIP14.37□□□□□ -0.11
SEMA6A-202ENST00000343348 MYL6BP14649 208 aa14.37□□□□□ -0.11
SEMA6A-202ENST00000343348 NLRP6P59044 892 aa14.37□□□□□ -0.11
SEMA6A-202ENST00000343348 HIP1O00291 1037 aa14.37□□□□□ -0.11
SEMA6A-202ENST00000343348 FKBP4Q02790 459 aaKnown RBP eCLIP14.36□□□□□ -0.11
SEMA6A-202ENST00000343348 ZNF644Q9H582 1327 aaPredicted RBP14.36□□□□□ -0.11
SEMA6A-202ENST00000343348 C11orf95C9JLR9 678 aaPredicted RBP14.36□□□□□ -0.11
SEMA6A-202ENST00000343348 PPP2R1AP30153 589 aa14.36□□□□□ -0.11
SEMA6A-202ENST00000343348 CCDC158Q5M9N0 1113 aa14.36□□□□□ -0.11
SEMA6A-202ENST00000343348 WWC2Q6AWC2 1192 aa14.36□□□□□ -0.11
SEMA6A-202ENST00000343348 SLC3A2P08195 630 aaKnown RBP14.36□□□□□ -0.11
SEMA6A-202ENST00000343348 ERLIN1O75477 346 aa14.36□□□□□ -0.11
SEMA6A-202ENST00000343348 AEBP1Q8IUX7 1158 aa14.36□□□□□ -0.11
SEMA6A-202ENST00000343348 GCC1Q96CN9 775 aa14.36□□□□□ -0.11
SEMA6A-202ENST00000343348 STIM1Q13586 685 aa14.36□□□□□ -0.11
SEMA6A-202ENST00000343348 KIAA1328Q86T90 577 aa14.36□□□□□ -0.11
SEMA6A-202ENST00000343348 ESPNB1AK53 854 aa14.35□□□□□ -0.11
SEMA6A-202ENST00000343348 DDX11Q96FC9 970 aa14.35□□□□□ -0.11
SEMA6A-202ENST00000343348 PDCL2Q8N4E4 241 aa14.35□□□□□ -0.11
SEMA6A-202ENST00000343348 JAKMIP1Q96N16 626 aaKnown RBP14.35□□□□□ -0.11
SEMA6A-202ENST00000343348 GOLGA6L7A0A1B0GV03 622 aa14.35□□□□□ -0.11
SEMA6A-202ENST00000343348 SKAP1Q86WV1 359 aa14.35□□□□□ -0.11
SEMA6A-202ENST00000343348 JMYQ8N9B5 988 aa14.35□□□□□ -0.11
SEMA6A-202ENST00000343348 NUP62CLQ9H1M0 184 aa14.35□□□□□ -0.11
SEMA6A-202ENST00000343348 DACH1Q9UI36 760 aa14.34□□□□□ -0.11
SEMA6A-202ENST00000343348 BRD4O60885 1362 aaPredicted RBP14.34□□□□□ -0.11
SEMA6A-202ENST00000343348 PDRG1Q9NUG6 133 aa14.34□□□□□ -0.11
SEMA6A-202ENST00000343348 SSR1P43307 286 aaKnown RBP14.34□□□□□ -0.11
SEMA6A-202ENST00000343348 ABTB2Q8N961 1025 aa14.34□□□□□ -0.11
SEMA6A-202ENST00000343348 AAMPQ13685 434 aa14.34□□□□□ -0.11
SEMA6A-202ENST00000343348 UPF3BQ9BZI7 483 aaKnown RBP14.34□□□□□ -0.11
SEMA6A-202ENST00000343348 MCM4P33991 863 aa14.33□□□□□ -0.11
SEMA6A-202ENST00000343348 PIP4K2AP48426 406 aaPredicted RBP14.33□□□□□ -0.11
SEMA6A-202ENST00000343348 CHD1LQ86WJ1 897 aa14.33□□□□□ -0.11
SEMA6A-202ENST00000343348 CBFA2T2O43439 604 aa14.33□□□□□ -0.12
SEMA6A-202ENST00000343348 TRIM22Q8IYM9 498 aa14.33□□□□□ -0.12
SEMA6A-202ENST00000343348 CCDC113Q9H0I3 377 aa14.33□□□□□ -0.12
SEMA6A-202ENST00000343348 IL1RAPL2Q9NP60 686 aa14.33□□□□□ -0.12
SEMA6A-202ENST00000343348 MATR3P43243 847 aaKnown RBP eCLIP14.32□□□□□ -0.12
SEMA6A-202ENST00000343348 AACSQ86V21 672 aa14.32□□□□□ -0.12
SEMA6A-202ENST00000343348 ANKRD1Q15327 319 aa14.32□□□□□ -0.12
SEMA6A-202ENST00000343348 ERC1Q8IUD2 1116 aa14.32□□□□□ -0.12
SEMA6A-202ENST00000343348 GOLGA6L10A0A0M3HER8 536 aa14.32□□□□□ -0.12
SEMA6A-202ENST00000343348 LUC7LQ9NQ29 371 aaKnown RBP14.32□□□□□ -0.12
SEMA6A-202ENST00000343348 MIA2Q96PC5 1412 aa14.32□□□□□ -0.12
SEMA6A-202ENST00000343348 POLR3GO15318 223 aaPredicted RBP14.32□□□□□ -0.12
SEMA6A-202ENST00000343348 ATF3P18847 181 aa14.32□□□□□ -0.12
SEMA6A-202ENST00000343348 CFAP100Q494V2 611 aa14.32□□□□□ -0.12
SEMA6A-202ENST00000343348 ANKRD18AQ8IVF6 992 aa14.32□□□□□ -0.12
SEMA6A-202ENST00000343348 EPB41L2O43491 1005 aaKnown RBP14.31□□□□□ -0.12
SEMA6A-202ENST00000343348 GBP2P32456 591 aaPredicted RBP14.31□□□□□ -0.12
SEMA6A-202ENST00000343348 STRN4Q9NRL3 753 aa14.31□□□□□ -0.12
SEMA6A-202ENST00000343348 PDS5BQ9NTI5 1447 aa14.31□□□□□ -0.12
SEMA6A-202ENST00000343348 DNA2P51530 1060 aa14.31□□□□□ -0.12
SEMA6A-202ENST00000343348 HDGFL1Q5TGJ6 251 aa14.31□□□□□ -0.12
SEMA6A-202ENST00000343348 TICAM2Q86XR7 235 aa14.31□□□□□ -0.12
SEMA6A-202ENST00000343348 DDX54Q8TDD1 881 aaKnown RBP14.31□□□□□ -0.12
SEMA6A-202ENST00000343348 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.31□□□□□ -0.12
SEMA6A-202ENST00000343348 RRP9O43818 475 aaKnown RBP14.31□□□□□ -0.12
SEMA6A-202ENST00000343348 BLOC1S2Q6QNY1 142 aa14.31□□□□□ -0.12
SEMA6A-202ENST00000343348 EIF5P55010 431 aaKnown RBP14.31□□□□□ -0.12
SEMA6A-202ENST00000343348 CYB5RLQ6IPT4 315 aa14.31□□□□□ -0.12
SEMA6A-202ENST00000343348 CASTP20810 708 aaKnown RBP14.3□□□□□ -0.12
SEMA6A-202ENST00000343348 RBM25P49756 843 aaKnown RBP14.3□□□□□ -0.12
SEMA6A-202ENST00000343348 FERMT3Q86UX7 667 aa14.3□□□□□ -0.12
SEMA6A-202ENST00000343348 CCDC85AQ96PX6 553 aaPredicted RBP14.3□□□□□ -0.12
SEMA6A-202ENST00000343348 ZFP91Q96JP5 570 aaPredicted RBP14.3□□□□□ -0.12
SEMA6A-202ENST00000343348 UBXN4Q92575 508 aa14.3□□□□□ -0.12
SEMA6A-202ENST00000343348 BCCIPQ9P287 314 aaKnown RBP eCLIP14.3□□□□□ -0.12
SEMA6A-202ENST00000343348 XPCQ01831 940 aaPredicted RBP14.29□□□□□ -0.12
SEMA6A-202ENST00000343348 SULT6B1Q6IMI4 303 aa14.29□□□□□ -0.12
SEMA6A-202ENST00000343348 DYDC1Q8WWB3 177 aa14.29□□□□□ -0.12
SEMA6A-202ENST00000343348 RBM5P52756 815 aaKnown RBP eCLIP14.29□□□□□ -0.12
SEMA6A-202ENST00000343348 NUTM1Q86Y26 1132 aa14.29□□□□□ -0.12
SEMA6A-202ENST00000343348 CEP57L1Q8IYX8 460 aa14.29□□□□□ -0.12
SEMA6A-202ENST00000343348 GAS2L2Q8NHY3 880 aa14.29□□□□□ -0.12
SEMA6A-202ENST00000343348 SOGA3Q5TF21 947 aa14.29□□□□□ -0.12
SEMA6A-202ENST00000343348 KLHL10Q6JEL2 608 aa14.29□□□□□ -0.12
SEMA6A-202ENST00000343348 DHX8Q14562 1220 aaKnown RBP14.28□□□□□ -0.12
SEMA6A-202ENST00000343348 ARHGAP29Q52LW3 1261 aa14.28□□□□□ -0.12
SEMA6A-202ENST00000343348 TRMT1Q9NXH9 659 aaKnown RBP14.28□□□□□ -0.12
SEMA6A-202ENST00000343348 CASQ1P31415 396 aa14.28□□□□□ -0.12
SEMA6A-202ENST00000343348 PDE3AQ14432 1141 aa14.28□□□□□ -0.12
SEMA6A-202ENST00000343348 TMCO3Q6UWJ1 677 aa14.28□□□□□ -0.12
SEMA6A-202ENST00000343348 USP5P45974 858 aa14.28□□□□□ -0.12
SEMA6A-202ENST00000343348 CCDC83Q8IWF9 413 aa14.28□□□□□ -0.12
SEMA6A-202ENST00000343348 CFAP70Q5T0N1 1121 aa14.28□□□□□ -0.12
SEMA6A-202ENST00000343348 LARP6Q9BRS8 491 aaKnown RBP14.28□□□□□ -0.12
SEMA6A-202ENST00000343348 GUCY1B3Q02153 619 aa14.28□□□□□ -0.12
SEMA6A-202ENST00000343348 MAP2K1Q02750 393 aaPredicted RBP14.28□□□□□ -0.12
SEMA6A-202ENST00000343348 CFAP45Q9UL16 551 aa14.28□□□□□ -0.12
SEMA6A-202ENST00000343348 SMARCA5O60264 1052 aaPredicted RBP14.27□□□□□ -0.12
SEMA6A-202ENST00000343348 MVPQ14764 893 aaKnown RBP14.27□□□□□ -0.12
SEMA6A-202ENST00000343348 MAP3K11Q16584 847 aa14.27□□□□□ -0.12
SEMA6A-202ENST00000343348 GOPCQ9HD26 462 aa14.27□□□□□ -0.12
SEMA6A-202ENST00000343348 TDO2P48775 406 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms