RNA–Protein interactions for RNA: ENST00000341040.11

LCN10-201, Transcript of lipocalin 10, humanhuman

TSL 1 (best)

Gene LCN10, Length 1,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN10-201ENST00000341040 PLCH1Q4KWH8 1693 aa20.3■□□□□ 0.84
LCN10-201ENST00000341040 HOXC9P31274 260 aa20.3■□□□□ 0.84
LCN10-201ENST00000341040 AFF2P51816 1311 aa20.29■□□□□ 0.84
LCN10-201ENST00000341040 MTHFSP49914 203 aa20.29■□□□□ 0.84
LCN10-201ENST00000341040 IP6K1Q92551 441 aa20.29■□□□□ 0.84
LCN10-201ENST00000341040 CAMTA1Q9Y6Y1 1673 aa20.29■□□□□ 0.84
LCN10-201ENST00000341040 LTV1Q96GA3 475 aaPredicted RBP20.29■□□□□ 0.84
LCN10-201ENST00000341040 STRN4Q9NRL3 753 aa20.29■□□□□ 0.84
LCN10-201ENST00000341040 LMO7Q8WWI1 1683 aa20.28■□□□□ 0.84
LCN10-201ENST00000341040 HSP90AB2PQ58FF8 381 aa20.28■□□□□ 0.84
LCN10-201ENST00000341040 USP21Q9UK80 565 aa20.26■□□□□ 0.83
LCN10-201ENST00000341040 SLIT2O94813 1529 aa20.26■□□□□ 0.83
LCN10-201ENST00000341040 FNBP4Q8N3X1 1017 aaPredicted RBP20.26■□□□□ 0.83
LCN10-201ENST00000341040 FLT4P35916 1363 aa20.26■□□□□ 0.83
LCN10-201ENST00000341040 EVA1CP58658 441 aa20.25■□□□□ 0.83
LCN10-201ENST00000341040 MYBBP1AQ9BQG0 1328 aaKnown RBP20.25■□□□□ 0.83
LCN10-201ENST00000341040 ANKRD24Q8TF21 1146 aa20.24■□□□□ 0.83
LCN10-201ENST00000341040 RTL1A6NKG5 1358 aa20.24■□□□□ 0.83
LCN10-201ENST00000341040 SMG6Q86US8 1419 aaKnown RBP20.23■□□□□ 0.83
LCN10-201ENST00000341040 BCL9LQ86UU0 1499 aa20.23■□□□□ 0.83
LCN10-201ENST00000341040 NRAPQ86VF7 1730 aa20.23■□□□□ 0.83
LCN10-201ENST00000341040 NWD2Q9ULI1 1742 aa20.23■□□□□ 0.83
LCN10-201ENST00000341040 CSB-PGBD3P0DP91 1061 aa20.23■□□□□ 0.83
LCN10-201ENST00000341040 UNC5CLQ8IV45 518 aa20.23■□□□□ 0.83
LCN10-201ENST00000341040 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
LCN10-201ENST00000341040 COL5A2P05997 1499 aaPredicted RBP20.22■□□□□ 0.83
LCN10-201ENST00000341040 LARP1Q6PKG0 1096 aaKnown RBP20.22■□□□□ 0.83
LCN10-201ENST00000341040 INSRP06213 1382 aa20.21■□□□□ 0.83
LCN10-201ENST00000341040 KIF24Q5T7B8 1368 aa20.21■□□□□ 0.83
LCN10-201ENST00000341040 BLMP54132 1417 aaPredicted RBP20.21■□□□□ 0.83
LCN10-201ENST00000341040 CCDC9Q9Y3X0 531 aaKnown RBP20.21■□□□□ 0.83
LCN10-201ENST00000341040 ABCC6O95255 1503 aa20.2■□□□□ 0.82
LCN10-201ENST00000341040 RGPD2P0DJD1 1756 aa20.2■□□□□ 0.82
LCN10-201ENST00000341040 EIF4A2Q14240 407 aaKnown RBP20.2■□□□□ 0.82
LCN10-201ENST00000341040 RGS17Q9UGC6 210 aaPredicted RBP20.2■□□□□ 0.82
LCN10-201ENST00000341040 CDK12Q9NYV4 1490 aaPredicted RBP20.2■□□□□ 0.82
LCN10-201ENST00000341040 ERBB3P21860 1342 aa20.2■□□□□ 0.82
LCN10-201ENST00000341040 TOM1L2Q6ZVM7 507 aa20.18■□□□□ 0.82
LCN10-201ENST00000341040 USP35Q9P2H5 1018 aa20.18■□□□□ 0.82
LCN10-201ENST00000341040 QTRT2Q9H974 415 aaKnown RBP20.18■□□□□ 0.82
LCN10-201ENST00000341040 WDR17Q8IZU2 1322 aa20.18■□□□□ 0.82
LCN10-201ENST00000341040 NLRP2Q9NX02 1062 aa20.17■□□□□ 0.82
LCN10-201ENST00000341040 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.16■□□□□ 0.82
LCN10-201ENST00000341040 CCDC184Q52MB2 194 aa20.16■□□□□ 0.82
LCN10-201ENST00000341040 ZNF772Q68DY9 489 aaPredicted RBP20.16■□□□□ 0.82
LCN10-201ENST00000341040 USHBP1Q8N6Y0 703 aa20.16■□□□□ 0.82
LCN10-201ENST00000341040 CFAP53Q96M91 514 aa20.16■□□□□ 0.82
LCN10-201ENST00000341040 DIAPH1O60610 1272 aaKnown RBP20.15■□□□□ 0.82
LCN10-201ENST00000341040 COL3A1P02461 1466 aaPredicted RBP20.15■□□□□ 0.82
LCN10-201ENST00000341040 IL13P35225 146 aa20.15■□□□□ 0.82
LCN10-201ENST00000341040 VPS72Q15906 364 aa20.15■□□□□ 0.82
LCN10-201ENST00000341040 NBPF6Q5VWK0 638 aa20.15■□□□□ 0.82
LCN10-201ENST00000341040 NBPF4Q96M43 638 aa20.15■□□□□ 0.82
LCN10-201ENST00000341040 TRPC5Q9UL62 973 aaPredicted RBP20.15■□□□□ 0.82
LCN10-201ENST00000341040 MIER1Q8N108 512 aa20.14■□□□□ 0.81
LCN10-201ENST00000341040 ATRNO75882 1429 aa20.14■□□□□ 0.81
LCN10-201ENST00000341040 POTEAQ6S8J7 498 aa20.13■□□□□ 0.81
LCN10-201ENST00000341040 EYA1Q99502 592 aa20.13■□□□□ 0.81
LCN10-201ENST00000341040 CRB1P82279 1406 aa20.13■□□□□ 0.81
LCN10-201ENST00000341040 SPATA31A5Q5VU36 1347 aa20.13■□□□□ 0.81
LCN10-201ENST00000341040 SPATA31A7Q8IWB4 1347 aa20.13■□□□□ 0.81
LCN10-201ENST00000341040 U2SURPO15042 1029 aaKnown RBP20.12■□□□□ 0.81
LCN10-201ENST00000341040 SPATA31A1Q5TZJ5 1347 aa20.11■□□□□ 0.81
LCN10-201ENST00000341040 CCER2I3L3R5 266 aa20.11■□□□□ 0.81
LCN10-201ENST00000341040 GJD4Q96KN9 370 aaPredicted RBP20.11■□□□□ 0.81
LCN10-201ENST00000341040 CARD10Q9BWT7 1032 aa20.11■□□□□ 0.81
LCN10-201ENST00000341040 FAM208AQ9UK61 1670 aaKnown RBP20.1■□□□□ 0.81
LCN10-201ENST00000341040 GLI3P10071 1580 aa20.09■□□□□ 0.81
LCN10-201ENST00000341040 HMOX1P09601 288 aa20.08■□□□□ 0.81
LCN10-201ENST00000341040 FAM98CQ17RN3 349 aaKnown RBP20.08■□□□□ 0.81
LCN10-201ENST00000341040 TCP11L2Q8N4U5 519 aa20.08■□□□□ 0.81
LCN10-201ENST00000341040 MRS2Q9HD23 443 aa20.08■□□□□ 0.81
LCN10-201ENST00000341040 AEBP1Q8IUX7 1158 aa20.08■□□□□ 0.8
LCN10-201ENST00000341040 SULT6B1Q6IMI4 303 aa20.07■□□□□ 0.8
LCN10-201ENST00000341040 NUDCQ9Y266 331 aa20.07■□□□□ 0.8
LCN10-201ENST00000341040 IGSF1Q8N6C5 1336 aa20.07■□□□□ 0.8
LCN10-201ENST00000341040 RGPD1P0DJD0 1748 aa20.06■□□□□ 0.8
LCN10-201ENST00000341040 U2AF1L5P0DN76 240 aaPredicted RBP20.06■□□□□ 0.8
LCN10-201ENST00000341040 RBM6P78332 1123 aaKnown RBP20.06■□□□□ 0.8
LCN10-201ENST00000341040 U2AF1Q01081 240 aaKnown RBP eCLIP20.06■□□□□ 0.8
LCN10-201ENST00000341040 A0A0G2JS52 829 aa20.05■□□□□ 0.8
LCN10-201ENST00000341040 RXRBP28702 533 aa20.05■□□□□ 0.8
LCN10-201ENST00000341040 MYT1Q01538 1121 aa20.05■□□□□ 0.8
LCN10-201ENST00000341040 THRAP3Q9Y2W1 955 aaKnown RBP20.03■□□□□ 0.8
LCN10-201ENST00000341040 WNK3Q9BYP7 1800 aa20.01■□□□□ 0.79
LCN10-201ENST00000341040 IL2RBP14784 551 aa20.01■□□□□ 0.79
LCN10-201ENST00000341040 WDR43Q15061 677 aaKnown RBP eCLIP20.01■□□□□ 0.79
LCN10-201ENST00000341040 BARGINQ6ZT62 677 aa20.01■□□□□ 0.79
LCN10-201ENST00000341040 MEGF6O75095 1541 aa20.01■□□□□ 0.79
LCN10-201ENST00000341040 NCAPD2Q15021 1401 aa20.01■□□□□ 0.79
LCN10-201ENST00000341040 RAPGEF4Q8WZA2 1011 aa20■□□□□ 0.79
LCN10-201ENST00000341040 TATP17735 454 aaPredicted RBP20■□□□□ 0.79
LCN10-201ENST00000341040 SEPT12Q8IYM1 358 aa20■□□□□ 0.79
LCN10-201ENST00000341040 DISP2A7MBM2 1401 aa19.99■□□□□ 0.79
LCN10-201ENST00000341040 ADAMTS8Q9UP79 889 aa19.99■□□□□ 0.79
LCN10-201ENST00000341040 RSPH6AQ9H0K4 717 aa19.98■□□□□ 0.79
LCN10-201ENST00000341040 PRKAR2BP31323 418 aa19.98■□□□□ 0.79
LCN10-201ENST00000341040 FAM9BQ8IZU0 186 aa19.98■□□□□ 0.79
LCN10-201ENST00000341040 PNISRQ8TF01 805 aaKnown RBP19.98■□□□□ 0.79
LCN10-201ENST00000341040 KDRP35968 1356 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms