RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ABCC6O95255 1503 aa18.69■□□□□ 0.58
SIRPB3P-201ENST00000340424 A0A1W2PP64 1363 aa18.68■□□□□ 0.58
SIRPB3P-201ENST00000340424 A0A0G2JS52 829 aa18.68■□□□□ 0.58
SIRPB3P-201ENST00000340424 MYT1Q01538 1121 aa18.68■□□□□ 0.58
SIRPB3P-201ENST00000340424 COL5A2P05997 1499 aaPredicted RBP18.68■□□□□ 0.58
SIRPB3P-201ENST00000340424 NFAT5O94916 1531 aa18.66■□□□□ 0.58
SIRPB3P-201ENST00000340424 BARGINQ6ZT62 677 aa18.66■□□□□ 0.58
SIRPB3P-201ENST00000340424 THRAP3Q9Y2W1 955 aaKnown RBP18.66■□□□□ 0.58
SIRPB3P-201ENST00000340424 BLMP54132 1417 aaPredicted RBP18.66■□□□□ 0.58
SIRPB3P-201ENST00000340424 ARHGEF25Q86VW2 580 aa18.65■□□□□ 0.58
SIRPB3P-201ENST00000340424 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.65■□□□□ 0.58
SIRPB3P-201ENST00000340424 ANKRD36BQ8N2N9 1353 aa18.65■□□□□ 0.58
SIRPB3P-201ENST00000340424 COL18A1P39060 1754 aa18.64■□□□□ 0.57
SIRPB3P-201ENST00000340424 CRB1P82279 1406 aa18.64■□□□□ 0.57
SIRPB3P-201ENST00000340424 LARP1Q6PKG0 1096 aaKnown RBP18.63■□□□□ 0.57
SIRPB3P-201ENST00000340424 TCP11L2Q8N4U5 519 aa18.63■□□□□ 0.57
SIRPB3P-201ENST00000340424 NME9Q86XW9 330 aa18.62■□□□□ 0.57
SIRPB3P-201ENST00000340424 OVOS2A0A0J9YW53 1432 aa18.61■□□□□ 0.57
SIRPB3P-201ENST00000340424 OVOS2Q6IE36 1432 aa18.61■□□□□ 0.57
SIRPB3P-201ENST00000340424 ZBTB7CA1YPR0 619 aa18.61■□□□□ 0.57
SIRPB3P-201ENST00000340424 WDR17Q8IZU2 1322 aa18.6■□□□□ 0.57
SIRPB3P-201ENST00000340424 SF3B2Q13435 895 aaKnown RBP18.6■□□□□ 0.57
SIRPB3P-201ENST00000340424 USP35Q9P2H5 1018 aa18.6■□□□□ 0.57
SIRPB3P-201ENST00000340424 PARP4Q9UKK3 1724 aaKnown RBP18.58■□□□□ 0.57
SIRPB3P-201ENST00000340424 SOX12O15370 315 aa18.58■□□□□ 0.56
SIRPB3P-201ENST00000340424 EIF4G2P78344 907 aaKnown RBP eCLIP18.57■□□□□ 0.56
SIRPB3P-201ENST00000340424 TOM1L2Q6ZVM7 507 aa18.57■□□□□ 0.56
SIRPB3P-201ENST00000340424 AXIN2Q9Y2T1 843 aa18.57■□□□□ 0.56
SIRPB3P-201ENST00000340424 LTN1O94822 1766 aa18.56■□□□□ 0.56
SIRPB3P-201ENST00000340424 C11orf95C9JLR9 678 aaPredicted RBP18.56■□□□□ 0.56
SIRPB3P-201ENST00000340424 FAM196AQ6ZSG2 479 aa18.56■□□□□ 0.56
SIRPB3P-201ENST00000340424 COG3Q96JB2 828 aa18.56■□□□□ 0.56
SIRPB3P-201ENST00000340424 CDCA7Q9BWT1 371 aaPredicted RBP18.56■□□□□ 0.56
SIRPB3P-201ENST00000340424 ZRANB1Q9UGI0 708 aa18.56■□□□□ 0.56
SIRPB3P-201ENST00000340424 RGPD1P0DJD0 1748 aa18.55■□□□□ 0.56
SIRPB3P-201ENST00000340424 PDE3BQ13370 1112 aa18.55■□□□□ 0.56
SIRPB3P-201ENST00000340424 MYOM1P52179 1685 aa18.54■□□□□ 0.56
SIRPB3P-201ENST00000340424 MYCNP04198 464 aaPredicted RBP18.54■□□□□ 0.56
SIRPB3P-201ENST00000340424 CSB-PGBD3P0DP91 1061 aa18.54■□□□□ 0.56
SIRPB3P-201ENST00000340424 CARD10Q9BWT7 1032 aa18.54■□□□□ 0.56
SIRPB3P-201ENST00000340424 RGPD5Q99666 1765 aa18.54■□□□□ 0.56
SIRPB3P-201ENST00000340424 WNK3Q9BYP7 1800 aa18.53■□□□□ 0.56
SIRPB3P-201ENST00000340424 CCDC7Q96M83 1385 aa18.53■□□□□ 0.56
SIRPB3P-201ENST00000340424 ERBB3P21860 1342 aa18.51■□□□□ 0.55
SIRPB3P-201ENST00000340424 DISP2A7MBM2 1401 aa18.51■□□□□ 0.55
SIRPB3P-201ENST00000340424 BAG6P46379 1132 aa18.51■□□□□ 0.55
SIRPB3P-201ENST00000340424 LRRC37A3O60309 1634 aa18.5■□□□□ 0.55
SIRPB3P-201ENST00000340424 KIF20BQ96Q89 1820 aa18.5■□□□□ 0.55
SIRPB3P-201ENST00000340424 FYB1O15117 783 aa18.49■□□□□ 0.55
SIRPB3P-201ENST00000340424 DDB1Q16531 1140 aa18.49■□□□□ 0.55
SIRPB3P-201ENST00000340424 FAM208AQ9UK61 1670 aaKnown RBP18.49■□□□□ 0.55
SIRPB3P-201ENST00000340424 TNS1Q9HBL0 1735 aaKnown RBP18.49■□□□□ 0.55
SIRPB3P-201ENST00000340424 RTL1A6NKG5 1358 aa18.48■□□□□ 0.55
SIRPB3P-201ENST00000340424 HSPA5P11021 654 aaKnown RBP18.48■□□□□ 0.55
SIRPB3P-201ENST00000340424 IP6K1Q92551 441 aa18.48■□□□□ 0.55
SIRPB3P-201ENST00000340424 OVOS2A0A0G2JMS6 1433 aa18.48■□□□□ 0.55
SIRPB3P-201ENST00000340424 FAM182BQ5T319 152 aa18.47■□□□□ 0.55
SIRPB3P-201ENST00000340424 DEFB132Q7Z7B7 95 aa18.47■□□□□ 0.55
SIRPB3P-201ENST00000340424 NSD3Q9BZ95 1437 aa18.47■□□□□ 0.55
SIRPB3P-201ENST00000340424 ANKRD24Q8TF21 1146 aa18.46■□□□□ 0.55
SIRPB3P-201ENST00000340424 KIF24Q5T7B8 1368 aa18.45■□□□□ 0.54
SIRPB3P-201ENST00000340424 PARD3Q8TEW0 1356 aa18.45■□□□□ 0.54
SIRPB3P-201ENST00000340424 GGNBP2Q9H3C7 697 aa18.45■□□□□ 0.54
SIRPB3P-201ENST00000340424 BCL9O00512 1426 aa18.45■□□□□ 0.54
SIRPB3P-201ENST00000340424 MAP3K19Q56UN5 1328 aa18.45■□□□□ 0.54
SIRPB3P-201ENST00000340424 PEAK1Q9H792 1746 aa18.44■□□□□ 0.54
SIRPB3P-201ENST00000340424 AMPHP49418 695 aa18.44■□□□□ 0.54
SIRPB3P-201ENST00000340424 CARD14Q9BXL6 1004 aa18.44■□□□□ 0.54
SIRPB3P-201ENST00000340424 NLRP2Q9NX02 1062 aa18.44■□□□□ 0.54
SIRPB3P-201ENST00000340424 CGNL1Q0VF96 1302 aa18.44■□□□□ 0.54
SIRPB3P-201ENST00000340424 TNS2Q63HR2 1409 aa18.43■□□□□ 0.54
SIRPB3P-201ENST00000340424 TRIM37O94972 964 aa18.43■□□□□ 0.54
SIRPB3P-201ENST00000340424 HOXC9P31274 260 aa18.43■□□□□ 0.54
SIRPB3P-201ENST00000340424 EXOC5O00471 708 aa18.42■□□□□ 0.54
SIRPB3P-201ENST00000340424 IL2RBP14784 551 aa18.41■□□□□ 0.54
SIRPB3P-201ENST00000340424 SMG6Q86US8 1419 aaKnown RBP18.4■□□□□ 0.54
SIRPB3P-201ENST00000340424 POLR3GLQ9BT43 218 aa18.4■□□□□ 0.54
SIRPB3P-201ENST00000340424 APBA3O96018 575 aa18.39■□□□□ 0.53
SIRPB3P-201ENST00000340424 EN1Q05925 392 aaPredicted RBP18.39■□□□□ 0.53
SIRPB3P-201ENST00000340424 FLT4P35916 1363 aa18.39■□□□□ 0.53
SIRPB3P-201ENST00000340424 RRS1Q15050 365 aaKnown RBP18.38■□□□□ 0.53
SIRPB3P-201ENST00000340424 MARCH10Q8NA82 808 aaPredicted RBP18.38■□□□□ 0.53
SIRPB3P-201ENST00000340424 RGPD3A6NKT7 1758 aaPredicted RBP18.37■□□□□ 0.53
SIRPB3P-201ENST00000340424 RGPD4Q7Z3J3 1758 aa18.37■□□□□ 0.53
SIRPB3P-201ENST00000340424 SBF2Q86WG5 1849 aa18.37■□□□□ 0.53
SIRPB3P-201ENST00000340424 SRCAPQ6ZRS2 3230 aa18.37■□□□□ 0.53
SIRPB3P-201ENST00000340424 CAMKK2Q96RR4 588 aa18.37■□□□□ 0.53
SIRPB3P-201ENST00000340424 INSRP06213 1382 aa18.37■□□□□ 0.53
SIRPB3P-201ENST00000340424 NSD2O96028 1365 aa18.36■□□□□ 0.53
SIRPB3P-201ENST00000340424 LTV1Q96GA3 475 aaPredicted RBP18.36■□□□□ 0.53
SIRPB3P-201ENST00000340424 BCL11BQ9C0K0 894 aaPredicted RBP18.36■□□□□ 0.53
SIRPB3P-201ENST00000340424 ANKRD26Q9UPS8 1709 aa18.36■□□□□ 0.53
SIRPB3P-201ENST00000340424 U3KPZ7 1027 aaPredicted RBP18.36■□□□□ 0.53
SIRPB3P-201ENST00000340424 FBLN1P23142 703 aa18.35■□□□□ 0.53
SIRPB3P-201ENST00000340424 RREB1Q92766 1687 aa18.34■□□□□ 0.53
SIRPB3P-201ENST00000340424 EZH2Q15910 746 aaKnown RBP18.34■□□□□ 0.53
SIRPB3P-201ENST00000340424 PANK3Q9H999 370 aa18.34■□□□□ 0.53
SIRPB3P-201ENST00000340424 PLSCR1O15162 318 aa18.32■□□□□ 0.52
SIRPB3P-201ENST00000340424 NHSQ6T4R5 1651 aa18.31■□□□□ 0.52
SIRPB3P-201ENST00000340424 HSP90AB2PQ58FF8 381 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms