RNA–Protein interactions for RNA: ENST00000329305.6

TPM2-201, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM2, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-201ENST00000329305 NSD2O96028 1365 aa22.6■■□□□ 1.21
TPM2-201ENST00000329305 SPATA31A5Q5VU36 1347 aa22.59■■□□□ 1.21
TPM2-201ENST00000329305 SPATA31A7Q8IWB4 1347 aa22.59■■□□□ 1.21
TPM2-201ENST00000329305 RGS12O14924 1447 aa22.58■■□□□ 1.21
TPM2-201ENST00000329305 AXIN2Q9Y2T1 843 aa22.58■■□□□ 1.21
TPM2-201ENST00000329305 GLI3P10071 1580 aa22.58■■□□□ 1.2
TPM2-201ENST00000329305 CSB-PGBD3P0DP91 1061 aa22.57■■□□□ 1.2
TPM2-201ENST00000329305 AMPHP49418 695 aa22.57■■□□□ 1.2
TPM2-201ENST00000329305 LARP1Q6PKG0 1096 aaKnown RBP22.57■■□□□ 1.2
TPM2-201ENST00000329305 MAP3K19Q56UN5 1328 aa22.57■■□□□ 1.2
TPM2-201ENST00000329305 SPATA31A1Q5TZJ5 1347 aa22.57■■□□□ 1.2
TPM2-201ENST00000329305 A0A0G2JS52 829 aa22.56■■□□□ 1.2
TPM2-201ENST00000329305 MYT1Q01538 1121 aa22.56■■□□□ 1.2
TPM2-201ENST00000329305 COL18A1P39060 1754 aa22.55■■□□□ 1.2
TPM2-201ENST00000329305 RRS1Q15050 365 aaKnown RBP22.55■■□□□ 1.2
TPM2-201ENST00000329305 TOM1L2Q6ZVM7 507 aa22.55■■□□□ 1.2
TPM2-201ENST00000329305 USP35Q9P2H5 1018 aa22.55■■□□□ 1.2
TPM2-201ENST00000329305 BLMP54132 1417 aaPredicted RBP22.55■■□□□ 1.2
TPM2-201ENST00000329305 CRB1P82279 1406 aa22.55■■□□□ 1.2
TPM2-201ENST00000329305 WDR17Q8IZU2 1322 aa22.55■■□□□ 1.2
TPM2-201ENST00000329305 LTN1O94822 1766 aa22.54■■□□□ 1.2
TPM2-201ENST00000329305 FBLN1P23142 703 aa22.54■■□□□ 1.2
TPM2-201ENST00000329305 FAM98CQ17RN3 349 aaKnown RBP22.54■■□□□ 1.2
TPM2-201ENST00000329305 IP6K1Q92551 441 aa22.54■■□□□ 1.2
TPM2-201ENST00000329305 RTL1A6NKG5 1358 aa22.53■■□□□ 1.2
TPM2-201ENST00000329305 MORC1Q86VD1 984 aa22.52■■□□□ 1.2
TPM2-201ENST00000329305 SEPT12Q8IYM1 358 aa22.52■■□□□ 1.2
TPM2-201ENST00000329305 TCP11L2Q8N4U5 519 aa22.52■■□□□ 1.2
TPM2-201ENST00000329305 THRAP3Q9Y2W1 955 aaKnown RBP22.52■■□□□ 1.2
TPM2-201ENST00000329305 ERBB3P21860 1342 aa22.52■■□□□ 1.2
TPM2-201ENST00000329305 SOCS7O14512 581 aa22.51■■□□□ 1.19
TPM2-201ENST00000329305 ONECUT3O60422 494 aaPredicted RBP22.51■■□□□ 1.19
TPM2-201ENST00000329305 HOXC9P31274 260 aa22.51■■□□□ 1.19
TPM2-201ENST00000329305 ANKRD24Q8TF21 1146 aa22.51■■□□□ 1.19
TPM2-201ENST00000329305 KIF24Q5T7B8 1368 aa22.5■■□□□ 1.19
TPM2-201ENST00000329305 PER1O15534 1290 aaPredicted RBP22.5■■□□□ 1.19
TPM2-201ENST00000329305 TNNT2P45379 298 aaPredicted RBP22.5■■□□□ 1.19
TPM2-201ENST00000329305 AMER1Q5JTC6 1135 aaPredicted RBP22.5■■□□□ 1.19
TPM2-201ENST00000329305 ANKRD26Q9UPS8 1709 aa22.5■■□□□ 1.19
TPM2-201ENST00000329305 BARGINQ6ZT62 677 aa22.49■■□□□ 1.19
TPM2-201ENST00000329305 FLT4P35916 1363 aa22.49■■□□□ 1.19
TPM2-201ENST00000329305 CARD10Q9BWT7 1032 aa22.48■■□□□ 1.19
TPM2-201ENST00000329305 PPM1GO15355 546 aaPredicted RBP22.47■■□□□ 1.19
TPM2-201ENST00000329305 LTV1Q96GA3 475 aaPredicted RBP22.47■■□□□ 1.19
TPM2-201ENST00000329305 NLRP2Q9NX02 1062 aa22.47■■□□□ 1.19
TPM2-201ENST00000329305 EMILIN1Q9Y6C2 1016 aa22.47■■□□□ 1.19
TPM2-201ENST00000329305 SMG6Q86US8 1419 aaKnown RBP22.47■■□□□ 1.19
TPM2-201ENST00000329305 RGPD5Q99666 1765 aa22.46■■□□□ 1.19
TPM2-201ENST00000329305 CC2D1BQ5T0F9 858 aaKnown RBP22.46■■□□□ 1.19
TPM2-201ENST00000329305 NPC1L1Q9UHC9 1359 aa22.45■■□□□ 1.18
TPM2-201ENST00000329305 INSRP06213 1382 aa22.44■■□□□ 1.18
TPM2-201ENST00000329305 POLKQ9UBT6 870 aa22.44■■□□□ 1.18
TPM2-201ENST00000329305 KRT27Q7Z3Y8 459 aa22.43■■□□□ 1.18
TPM2-201ENST00000329305 CDCA7Q9BWT1 371 aaPredicted RBP22.43■■□□□ 1.18
TPM2-201ENST00000329305 HSP90AB2PQ58FF8 381 aa22.42■■□□□ 1.18
TPM2-201ENST00000329305 THSD7AQ9UPZ6 1657 aa22.42■■□□□ 1.18
TPM2-201ENST00000329305 CNGB1Q14028 1251 aaPredicted RBP22.41■■□□□ 1.18
TPM2-201ENST00000329305 PEAK1Q9H792 1746 aa22.4■■□□□ 1.18
TPM2-201ENST00000329305 FAM208AQ9UK61 1670 aaKnown RBP22.39■■□□□ 1.18
TPM2-201ENST00000329305 PDE3BQ13370 1112 aa22.39■■□□□ 1.17
TPM2-201ENST00000329305 DDB1Q16531 1140 aa22.37■■□□□ 1.17
TPM2-201ENST00000329305 MAP2P11137 1827 aaKnown RBP22.36■■□□□ 1.17
TPM2-201ENST00000329305 IL2RBP14784 551 aa22.36■■□□□ 1.17
TPM2-201ENST00000329305 DDX10Q13206 875 aaKnown RBP22.35■■□□□ 1.17
TPM2-201ENST00000329305 BRWD3Q6RI45 1802 aa22.34■■□□□ 1.17
TPM2-201ENST00000329305 DISP2A7MBM2 1401 aa22.34■■□□□ 1.17
TPM2-201ENST00000329305 EXOC5O00471 708 aa22.33■■□□□ 1.17
TPM2-201ENST00000329305 NBPF6Q5VWK0 638 aa22.33■■□□□ 1.17
TPM2-201ENST00000329305 NBPF4Q96M43 638 aa22.33■■□□□ 1.17
TPM2-201ENST00000329305 PARP4Q9UKK3 1724 aaKnown RBP22.33■■□□□ 1.17
TPM2-201ENST00000329305 UPF1Q92900 1129 aaKnown RBP eCLIP22.32■■□□□ 1.16
TPM2-201ENST00000329305 WNK3Q9BYP7 1800 aa22.31■■□□□ 1.16
TPM2-201ENST00000329305 MTHFSP49914 203 aa22.31■■□□□ 1.16
TPM2-201ENST00000329305 ZNF316A6NFI3 1004 aaPredicted RBP22.3■■□□□ 1.16
TPM2-201ENST00000329305 EIF4A2Q14240 407 aaKnown RBP22.3■■□□□ 1.16
TPM2-201ENST00000329305 USHBP1Q8N6Y0 703 aa22.3■■□□□ 1.16
TPM2-201ENST00000329305 RAPGEF4Q8WZA2 1011 aa22.3■■□□□ 1.16
TPM2-201ENST00000329305 LRRC37A3O60309 1634 aa22.29■■□□□ 1.16
TPM2-201ENST00000329305 FAM182BQ5T319 152 aa22.29■■□□□ 1.16
TPM2-201ENST00000329305 FAM196AQ6ZSG2 479 aa22.29■■□□□ 1.16
TPM2-201ENST00000329305 TNS2Q63HR2 1409 aa22.29■■□□□ 1.16
TPM2-201ENST00000329305 CCDC125Q86Z20 511 aa22.28■■□□□ 1.16
TPM2-201ENST00000329305 EYA1Q99502 592 aa22.27■■□□□ 1.16
TPM2-201ENST00000329305 OVOS2A0A0G2JMS6 1433 aa22.26■■□□□ 1.15
TPM2-201ENST00000329305 TATP17735 454 aaPredicted RBP22.26■■□□□ 1.15
TPM2-201ENST00000329305 SF3B2Q13435 895 aaKnown RBP22.26■■□□□ 1.15
TPM2-201ENST00000329305 RGPD2P0DJD1 1756 aa22.25■■□□□ 1.15
TPM2-201ENST00000329305 MEGF6O75095 1541 aa22.23■■□□□ 1.15
TPM2-201ENST00000329305 CFAP53Q96M91 514 aa22.23■■□□□ 1.15
TPM2-201ENST00000329305 NCAPD2Q15021 1401 aa22.23■■□□□ 1.15
TPM2-201ENST00000329305 MARCH10Q8NA82 808 aaPredicted RBP22.22■■□□□ 1.15
TPM2-201ENST00000329305 ZCRB1Q8TBF4 217 aaKnown RBP22.22■■□□□ 1.15
TPM2-201ENST00000329305 IGSF1Q8N6C5 1336 aa22.22■■□□□ 1.15
TPM2-201ENST00000329305 DIAPH1O60610 1272 aaKnown RBP22.21■■□□□ 1.15
TPM2-201ENST00000329305 PPP2R1AP30153 589 aa22.21■■□□□ 1.15
TPM2-201ENST00000329305 IL13P35225 146 aa22.21■■□□□ 1.15
TPM2-201ENST00000329305 PARD3Q8TEW0 1356 aa22.21■■□□□ 1.15
TPM2-201ENST00000329305 RALBP1Q15311 655 aa22.2■■□□□ 1.14
TPM2-201ENST00000329305 DDX54Q8TDD1 881 aaKnown RBP22.2■■□□□ 1.14
TPM2-201ENST00000329305 BCL9O00512 1426 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms