RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PLEKHG5O94827 1062 aa13.66□□□□□ -0.22
VIPAS39-201ENST00000327028 IL13P35225 146 aa13.66□□□□□ -0.22
VIPAS39-201ENST00000327028 HSP90AB2PQ58FF8 381 aa13.65□□□□□ -0.22
VIPAS39-201ENST00000327028 IP6K1Q92551 441 aa13.65□□□□□ -0.22
VIPAS39-201ENST00000327028 EIF4A2Q14240 407 aaKnown RBP13.65□□□□□ -0.22
VIPAS39-201ENST00000327028 U2SURPO15042 1029 aaKnown RBP13.63□□□□□ -0.23
VIPAS39-201ENST00000327028 U2AF1L5P0DN76 240 aaPredicted RBP13.63□□□□□ -0.23
VIPAS39-201ENST00000327028 U2AF1Q01081 240 aaKnown RBP eCLIP13.63□□□□□ -0.23
VIPAS39-201ENST00000327028 ZC3H6P61129 1189 aaKnown RBP13.63□□□□□ -0.23
VIPAS39-201ENST00000327028 KIAA0232Q92628 1395 aa13.63□□□□□ -0.23
VIPAS39-201ENST00000327028 ZBTB7CA1YPR0 619 aa13.62□□□□□ -0.23
VIPAS39-201ENST00000327028 HNRNPUQ00839 825 aaKnown RBP eCLIP13.62□□□□□ -0.23
VIPAS39-201ENST00000327028 LMO7Q8WWI1 1683 aa13.62□□□□□ -0.23
VIPAS39-201ENST00000327028 RGPD5Q99666 1765 aa13.62□□□□□ -0.23
VIPAS39-201ENST00000327028 HAP1P54257 671 aaPredicted RBP13.62□□□□□ -0.23
VIPAS39-201ENST00000327028 FAM208AQ9UK61 1670 aaKnown RBP13.61□□□□□ -0.23
VIPAS39-201ENST00000327028 CAMTA1Q9Y6Y1 1673 aa13.61□□□□□ -0.23
VIPAS39-201ENST00000327028 COL14A1Q05707 1796 aaKnown RBP13.6□□□□□ -0.23
VIPAS39-201ENST00000327028 IGSF1Q8N6C5 1336 aa13.6□□□□□ -0.23
VIPAS39-201ENST00000327028 JCADQ9P266 1359 aa13.59□□□□□ -0.23
VIPAS39-201ENST00000327028 FCHSD2O94868 740 aa13.59□□□□□ -0.23
VIPAS39-201ENST00000327028 CCDC146Q8IYE0 955 aa13.59□□□□□ -0.23
VIPAS39-201ENST00000327028 RUNDC1Q96C34 613 aa13.59□□□□□ -0.23
VIPAS39-201ENST00000327028 RSPH6AQ9H0K4 717 aa13.59□□□□□ -0.23
VIPAS39-201ENST00000327028 RGPD2P0DJD1 1756 aa13.59□□□□□ -0.23
VIPAS39-201ENST00000327028 PNNQ9H307 717 aaKnown RBP13.59□□□□□ -0.23
VIPAS39-201ENST00000327028 PRDM11Q9NQV5 511 aa13.59□□□□□ -0.23
VIPAS39-201ENST00000327028 ZBED9Q6R2W3 1325 aa13.58□□□□□ -0.24
VIPAS39-201ENST00000327028 AXIN2Q9Y2T1 843 aa13.58□□□□□ -0.24
VIPAS39-201ENST00000327028 KDRP35968 1356 aa13.58□□□□□ -0.24
VIPAS39-201ENST00000327028 NCAPD2Q15021 1401 aa13.58□□□□□ -0.24
VIPAS39-201ENST00000327028 CHRNA2Q15822 529 aa13.58□□□□□ -0.24
VIPAS39-201ENST00000327028 PLEKHF1Q96S99 279 aa13.58□□□□□ -0.24
VIPAS39-201ENST00000327028 ERBB3P21860 1342 aa13.57□□□□□ -0.24
VIPAS39-201ENST00000327028 ANKRD24Q8TF21 1146 aa13.57□□□□□ -0.24
VIPAS39-201ENST00000327028 LTV1Q96GA3 475 aaPredicted RBP13.57□□□□□ -0.24
VIPAS39-201ENST00000327028 EYA1Q99502 592 aa13.57□□□□□ -0.24
VIPAS39-201ENST00000327028 HMOX1P09601 288 aa13.57□□□□□ -0.24
VIPAS39-201ENST00000327028 PLCH1Q4KWH8 1693 aa13.56□□□□□ -0.24
VIPAS39-201ENST00000327028 PRKAR2BP31323 418 aa13.56□□□□□ -0.24
VIPAS39-201ENST00000327028 MAPK8IP3Q9UPT6 1336 aa13.55□□□□□ -0.24
VIPAS39-201ENST00000327028 COL5A2P05997 1499 aaPredicted RBP13.55□□□□□ -0.24
VIPAS39-201ENST00000327028 SULT6B1Q6IMI4 303 aa13.55□□□□□ -0.24
VIPAS39-201ENST00000327028 AEBP1Q8IUX7 1158 aa13.55□□□□□ -0.24
VIPAS39-201ENST00000327028 APAF1O14727 1248 aa13.55□□□□□ -0.24
VIPAS39-201ENST00000327028 HSPA1LP34931 641 aa13.55□□□□□ -0.24
VIPAS39-201ENST00000327028 NGEFQ8N5V2 710 aa13.55□□□□□ -0.24
VIPAS39-201ENST00000327028 FAM83GA6ND36 823 aa13.54□□□□□ -0.24
VIPAS39-201ENST00000327028 NEFMP07197 916 aa13.53□□□□□ -0.24
VIPAS39-201ENST00000327028 NBPF6Q5VWK0 638 aa13.53□□□□□ -0.24
VIPAS39-201ENST00000327028 TCP11L2Q8N4U5 519 aa13.53□□□□□ -0.24
VIPAS39-201ENST00000327028 NBPF4Q96M43 638 aa13.53□□□□□ -0.24
VIPAS39-201ENST00000327028 SPATA31A6Q5VVP1 1343 aa13.53□□□□□ -0.24
VIPAS39-201ENST00000327028 NCBP3Q53F19 620 aaKnown RBP13.53□□□□□ -0.24
VIPAS39-201ENST00000327028 NWD2Q9ULI1 1742 aa13.52□□□□□ -0.24
VIPAS39-201ENST00000327028 NRAPQ86VF7 1730 aa13.52□□□□□ -0.25
VIPAS39-201ENST00000327028 SENP3-EIF4A1A0A087X0R7 540 aa13.52□□□□□ -0.25
VIPAS39-201ENST00000327028 CENPBP07199 599 aaPredicted RBP13.52□□□□□ -0.25
VIPAS39-201ENST00000327028 WDR17Q8IZU2 1322 aa13.52□□□□□ -0.25
VIPAS39-201ENST00000327028 USHBP1Q8N6Y0 703 aa13.51□□□□□ -0.25
VIPAS39-201ENST00000327028 NUTM2BA6NNL0 878 aaPredicted RBP13.51□□□□□ -0.25
VIPAS39-201ENST00000327028 NUTM2EB1AL46 878 aaPredicted RBP13.51□□□□□ -0.25
VIPAS39-201ENST00000327028 CSB-PGBD3P0DP91 1061 aa13.51□□□□□ -0.25
VIPAS39-201ENST00000327028 NUTM2AQ8IVF1 878 aaPredicted RBP13.51□□□□□ -0.25
VIPAS39-201ENST00000327028 PHACTR3Q96KR7 559 aa13.5□□□□□ -0.25
VIPAS39-201ENST00000327028 LRP6O75581 1613 aa13.5□□□□□ -0.25
VIPAS39-201ENST00000327028 DLG5Q8TDM6 1919 aa13.5□□□□□ -0.25
VIPAS39-201ENST00000327028 ZNF521Q96K83 1311 aa13.5□□□□□ -0.25
VIPAS39-201ENST00000327028 ADAMTS2O95450 1211 aa13.5□□□□□ -0.25
VIPAS39-201ENST00000327028 TMPOP42166 694 aaKnown RBP13.5□□□□□ -0.25
VIPAS39-201ENST00000327028 NLRP2Q9NX02 1062 aa13.5□□□□□ -0.25
VIPAS39-201ENST00000327028 PLEKHG2Q9H7P9 1386 aa13.49□□□□□ -0.25
VIPAS39-201ENST00000327028 NFE2L2Q16236 605 aa13.49□□□□□ -0.25
VIPAS39-201ENST00000327028 CCDC27Q2M243 656 aa13.49□□□□□ -0.25
VIPAS39-201ENST00000327028 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
VIPAS39-201ENST00000327028 SALL2Q9Y467 1007 aaPredicted RBP13.49□□□□□ -0.25
VIPAS39-201ENST00000327028 PHF23Q9BUL5 403 aaPredicted RBP13.49□□□□□ -0.25
VIPAS39-201ENST00000327028 BTG4Q9NY30 223 aa13.49□□□□□ -0.25
VIPAS39-201ENST00000327028 SLIT2O94813 1529 aa13.49□□□□□ -0.25
VIPAS39-201ENST00000327028 CRB1P82279 1406 aa13.48□□□□□ -0.25
VIPAS39-201ENST00000327028 PARP4Q9UKK3 1724 aaKnown RBP13.48□□□□□ -0.25
VIPAS39-201ENST00000327028 EVA1CP58658 441 aa13.47□□□□□ -0.25
VIPAS39-201ENST00000327028 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
VIPAS39-201ENST00000327028 STRN4Q9NRL3 753 aa13.47□□□□□ -0.25
VIPAS39-201ENST00000327028 PKD1L3Q7Z443 1732 aa13.47□□□□□ -0.25
VIPAS39-201ENST00000327028 NEUROD2Q15784 382 aa13.46□□□□□ -0.25
VIPAS39-201ENST00000327028 TOM1L2Q6ZVM7 507 aa13.46□□□□□ -0.25
VIPAS39-201ENST00000327028 CARD10Q9BWT7 1032 aa13.46□□□□□ -0.25
VIPAS39-201ENST00000327028 MEGF6O75095 1541 aa13.46□□□□□ -0.25
VIPAS39-201ENST00000327028 RIPK4P57078 832 aa13.46□□□□□ -0.25
VIPAS39-201ENST00000327028 LARP1Q6PKG0 1096 aaKnown RBP13.46□□□□□ -0.25
VIPAS39-201ENST00000327028 WWC1Q8IX03 1113 aa13.46□□□□□ -0.25
VIPAS39-201ENST00000327028 GAS2L2Q8NHY3 880 aa13.46□□□□□ -0.25
VIPAS39-201ENST00000327028 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.46□□□□□ -0.25
VIPAS39-201ENST00000327028 WNK3Q9BYP7 1800 aa13.46□□□□□ -0.26
VIPAS39-201ENST00000327028 LMOD3Q0VAK6 560 aa13.45□□□□□ -0.26
VIPAS39-201ENST00000327028 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
VIPAS39-201ENST00000327028 MTHFSDQ2M296 383 aaKnown RBP13.44□□□□□ -0.26
VIPAS39-201ENST00000327028 RAPGEF4Q8WZA2 1011 aa13.44□□□□□ -0.26
VIPAS39-201ENST00000327028 OVOS2A0A0G2JMS6 1433 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms