RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 PDXDC2PQ6P474 469 aa8.3□□□□□ -1.08
CBX3P1-201ENST00000325243 PROCA1Q8NCQ7 364 aaPredicted RBP8.29□□□□□ -1.08
CBX3P1-201ENST00000325243 OCSTAMPQ9BR26 566 aa8.29□□□□□ -1.08
CBX3P1-201ENST00000325243 ARHGAP9Q9BRR9 750 aa8.29□□□□□ -1.08
CBX3P1-201ENST00000325243 FKBPLQ9UIM3 349 aa8.29□□□□□ -1.08
CBX3P1-201ENST00000325243 NR6A1Q15406 480 aa8.28□□□□□ -1.08
CBX3P1-201ENST00000325243 SKIV2LQ15477 1246 aaKnown RBP8.28□□□□□ -1.08
CBX3P1-201ENST00000325243 GPBP1L1Q9HC44 474 aaPredicted RBP8.28□□□□□ -1.08
CBX3P1-201ENST00000325243 TTLL8A6PVC2 850 aa8.27□□□□□ -1.09
CBX3P1-201ENST00000325243 Q6ZVU0 165 aa8.27□□□□□ -1.09
CBX3P1-201ENST00000325243 SLC10A4Q96EP9 437 aa8.27□□□□□ -1.09
CBX3P1-201ENST00000325243 KCTD15Q96SI1 283 aaPredicted RBP8.27□□□□□ -1.09
CBX3P1-201ENST00000325243 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.27□□□□□ -1.09
CBX3P1-201ENST00000325243 FIGNL2A6NMB9 653 aa8.26□□□□□ -1.09
CBX3P1-201ENST00000325243 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.26□□□□□ -1.09
CBX3P1-201ENST00000325243 SH3D19Q5HYK7 790 aa8.26□□□□□ -1.09
CBX3P1-201ENST00000325243 GPR161Q8N6U8 529 aaKnown RBP8.26□□□□□ -1.09
CBX3P1-201ENST00000325243 FAM117AQ9C073 453 aa8.26□□□□□ -1.09
CBX3P1-201ENST00000325243 PGPEP1Q9NXJ5 209 aa8.26□□□□□ -1.09
CBX3P1-201ENST00000325243 SPINT1O43278 529 aa8.25□□□□□ -1.09
CBX3P1-201ENST00000325243 KRT76Q01546 638 aa8.25□□□□□ -1.09
CBX3P1-201ENST00000325243 PTSQ03393 145 aa8.25□□□□□ -1.09
CBX3P1-201ENST00000325243 INTS6LQ5JSJ4 861 aaKnown RBP8.25□□□□□ -1.09
CBX3P1-201ENST00000325243 PPP2R2DQ66LE6 453 aa8.25□□□□□ -1.09
CBX3P1-201ENST00000325243 KDM4CQ9H3R0 1056 aa8.25□□□□□ -1.09
CBX3P1-201ENST00000325243 ZBTB33Q86T24 672 aa8.24□□□□□ -1.09
CBX3P1-201ENST00000325243 EPS8L1Q8TE68 723 aa8.24□□□□□ -1.09
CBX3P1-201ENST00000325243 ZC3H4Q9UPT8 1303 aaKnown RBP8.24□□□□□ -1.09
CBX3P1-201ENST00000325243 ADAM32Q8TC27 787 aa8.23□□□□□ -1.09
CBX3P1-201ENST00000325243 AGBL1Q96MI9 1066 aa8.23□□□□□ -1.09
CBX3P1-201ENST00000325243 CDV3Q9UKY7 258 aaKnown RBP8.23□□□□□ -1.09
CBX3P1-201ENST00000325243 AP1G2O75843 785 aa8.22□□□□□ -1.09
CBX3P1-201ENST00000325243 HMX1Q9NP08 348 aaPredicted RBP8.22□□□□□ -1.09
CBX3P1-201ENST00000325243 CTSOP43234 321 aaPredicted RBP8.21□□□□□ -1.1
CBX3P1-201ENST00000325243 RELBQ01201 579 aa8.21□□□□□ -1.1
CBX3P1-201ENST00000325243 PTK2Q05397 1052 aa8.21□□□□□ -1.1
CBX3P1-201ENST00000325243 DHX9Q08211 1270 aaKnown RBP8.21□□□□□ -1.1
CBX3P1-201ENST00000325243 CCDC155Q8N6L0 562 aa8.21□□□□□ -1.1
CBX3P1-201ENST00000325243 DDRGK1Q96HY6 314 aa8.21□□□□□ -1.1
CBX3P1-201ENST00000325243 CNTNAP3BQ96NU0 1288 aa8.2□□□□□ -1.1
CBX3P1-201ENST00000325243 INSM2Q96T92 566 aaPredicted RBP8.2□□□□□ -1.1
CBX3P1-201ENST00000325243 CNTNAP3Q9BZ76 1288 aa8.2□□□□□ -1.1
CBX3P1-201ENST00000325243 ATP1B4Q9UN42 357 aaPredicted RBP8.2□□□□□ -1.1
CBX3P1-201ENST00000325243 GPSM3Q9Y4H4 160 aa8.2□□□□□ -1.1
CBX3P1-201ENST00000325243 SLC35F4A4IF30 521 aa8.19□□□□□ -1.1
CBX3P1-201ENST00000325243 USP17L8P0C7I0 530 aa8.19□□□□□ -1.1
CBX3P1-201ENST00000325243 TMPRSS4Q9NRS4 437 aa8.19□□□□□ -1.1
CBX3P1-201ENST00000325243 GSK3AP49840 483 aa8.18□□□□□ -1.1
CBX3P1-201ENST00000325243 RNFT1Q5M7Z0 435 aa8.18□□□□□ -1.1
CBX3P1-201ENST00000325243 ZNF784Q8NCA9 323 aaPredicted RBP8.18□□□□□ -1.1
CBX3P1-201ENST00000325243 NANOS1Q8WY41 292 aaKnown RBP8.18□□□□□ -1.1
CBX3P1-201ENST00000325243 COL25A1Q9BXS0 654 aaPredicted RBP8.18□□□□□ -1.1
CBX3P1-201ENST00000325243 RAB15P59190 212 aa8.17□□□□□ -1.1
CBX3P1-201ENST00000325243 ZNF395Q9H8N7 513 aaPredicted RBP8.17□□□□□ -1.1
CBX3P1-201ENST00000325243 LILRA1O75019 489 aa8.16□□□□□ -1.1
CBX3P1-201ENST00000325243 ITGA6P23229 1130 aa8.16□□□□□ -1.1
CBX3P1-201ENST00000325243 ADD1P35611 737 aaKnown RBP8.16□□□□□ -1.1
CBX3P1-201ENST00000325243 NBPF20Q3BBV1 942 aa8.16□□□□□ -1.1
CBX3P1-201ENST00000325243 KDF1Q8NAX2 398 aaPredicted RBP8.16□□□□□ -1.1
CBX3P1-201ENST00000325243 RNF217Q8TC41 542 aa8.16□□□□□ -1.1
CBX3P1-201ENST00000325243 POLMQ9NP87 494 aaPredicted RBP8.16□□□□□ -1.1
CBX3P1-201ENST00000325243 SENP3-EIF4A1A0A087X0R7 540 aa8.15□□□□□ -1.1
CBX3P1-201ENST00000325243 ERVH48-1M5A8F1 160 aa8.15□□□□□ -1.1
CBX3P1-201ENST00000325243 ADH1AP07327 375 aa8.15□□□□□ -1.1
CBX3P1-201ENST00000325243 VWA5B2Q8N398 1253 aa8.15□□□□□ -1.1
CBX3P1-201ENST00000325243 RFC5P40937 340 aa8.14□□□□□ -1.11
CBX3P1-201ENST00000325243 KCNMA1Q12791 1236 aa8.14□□□□□ -1.11
CBX3P1-201ENST00000325243 DZIP3Q86Y13 1208 aaKnown RBP8.14□□□□□ -1.11
CBX3P1-201ENST00000325243 TRIM34Q9BYJ4 488 aa8.14□□□□□ -1.11
CBX3P1-201ENST00000325243 CDC14CA4D256 554 aa8.13□□□□□ -1.11
CBX3P1-201ENST00000325243 ESPNB1AK53 854 aa8.13□□□□□ -1.11
CBX3P1-201ENST00000325243 FOXD4L5Q5VV16 416 aaPredicted RBP8.13□□□□□ -1.11
CBX3P1-201ENST00000325243 ZNF385CQ66K41 422 aaPredicted RBP8.13□□□□□ -1.11
CBX3P1-201ENST00000325243 WHAMMQ8TF30 809 aa8.12□□□□□ -1.11
CBX3P1-201ENST00000325243 ADAMTS8Q9UP79 889 aa8.12□□□□□ -1.11
CBX3P1-201ENST00000325243 PTGIRP43119 386 aa8.11□□□□□ -1.11
CBX3P1-201ENST00000325243 PNMA1Q8ND90 353 aa8.11□□□□□ -1.11
CBX3P1-201ENST00000325243 SLURP2P0DP57 97 aa8.1□□□□□ -1.11
CBX3P1-201ENST00000325243 SV2AQ7L0J3 742 aa8.1□□□□□ -1.11
CBX3P1-201ENST00000325243 KCTD17Q8N5Z5 321 aa8.1□□□□□ -1.11
CBX3P1-201ENST00000325243 CYLDQ9NQC7 956 aa8.1□□□□□ -1.11
CBX3P1-201ENST00000325243 SVOPQ8N4V2 548 aa8.09□□□□□ -1.11
CBX3P1-201ENST00000325243 CUEDC1Q9NWM3 386 aaPredicted RBP8.09□□□□□ -1.11
CBX3P1-201ENST00000325243 RASSF7Q02833 373 aa8.08□□□□□ -1.12
CBX3P1-201ENST00000325243 GIGYF1O75420 1035 aaPredicted RBP8.07□□□□□ -1.12
CBX3P1-201ENST00000325243 ARHGEF15O94989 841 aa8.07□□□□□ -1.12
CBX3P1-201ENST00000325243 LYSMD3Q7Z3D4 306 aa8.07□□□□□ -1.12
CBX3P1-201ENST00000325243 SEPT12Q8IYM1 358 aa8.07□□□□□ -1.12
CBX3P1-201ENST00000325243 PRICKLE2Q7Z3G6 844 aa8.06□□□□□ -1.12
CBX3P1-201ENST00000325243 TMEM151AQ8N4L1 468 aa8.06□□□□□ -1.12
CBX3P1-201ENST00000325243 GJD4Q96KN9 370 aaPredicted RBP8.06□□□□□ -1.12
CBX3P1-201ENST00000325243 LOC100996750A0A140TA64 210 aa8.05□□□□□ -1.12
CBX3P1-201ENST00000325243 GDF11O95390 407 aa8.05□□□□□ -1.12
CBX3P1-201ENST00000325243 FBXO45P0C2W1 286 aa8.05□□□□□ -1.12
CBX3P1-201ENST00000325243 RHOQP17081 205 aa8.05□□□□□ -1.12
CBX3P1-201ENST00000325243 GAS6Q14393 721 aa8.05□□□□□ -1.12
CBX3P1-201ENST00000325243 PCMTD1Q96MG8 357 aaPredicted RBP8.05□□□□□ -1.12
CBX3P1-201ENST00000325243 KRTAP4-6Q9BYQ5 205 aa8.05□□□□□ -1.12
CBX3P1-201ENST00000325243 GOPCQ9HD26 462 aa8.05□□□□□ -1.12
CBX3P1-201ENST00000325243 PCDHB9Q9Y5E1 797 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms