RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 POTEJP0CG39 1038 aa14.29□□□□□ -0.12
FARP1-201ENST00000319562 GNL3LQ9NVN8 582 aaKnown RBP14.29□□□□□ -0.12
FARP1-201ENST00000319562 UPF3BQ9BZI7 483 aaKnown RBP14.29□□□□□ -0.12
FARP1-201ENST00000319562 RAPGEF4Q8WZA2 1011 aa14.29□□□□□ -0.12
FARP1-201ENST00000319562 MINK1Q8N4C8 1332 aaPredicted RBP14.29□□□□□ -0.12
FARP1-201ENST00000319562 KDM4AO75164 1064 aa14.29□□□□□ -0.12
FARP1-201ENST00000319562 AIMP1Q12904 312 aaKnown RBP14.29□□□□□ -0.12
FARP1-201ENST00000319562 DHX37Q8IY37 1157 aaKnown RBP14.29□□□□□ -0.12
FARP1-201ENST00000319562 FEZ1Q99689 392 aa14.29□□□□□ -0.12
FARP1-201ENST00000319562 ZHX3Q9H4I2 956 aa14.29□□□□□ -0.12
FARP1-201ENST00000319562 SEPT11Q9NVA2 429 aaKnown RBP14.29□□□□□ -0.12
FARP1-201ENST00000319562 CCDC69A6NI79 296 aa14.29□□□□□ -0.12
FARP1-201ENST00000319562 NACAP1Q9BZK3 213 aa14.29□□□□□ -0.12
FARP1-201ENST00000319562 ZSCAN12O43309 604 aa14.28□□□□□ -0.12
FARP1-201ENST00000319562 GNAI2P04899 355 aa14.28□□□□□ -0.12
FARP1-201ENST00000319562 CCDC57Q2TAC2 916 aa14.28□□□□□ -0.12
FARP1-201ENST00000319562 CIZ1Q9ULV3 898 aaPredicted RBP14.28□□□□□ -0.12
FARP1-201ENST00000319562 NEBLO76041 1014 aa14.28□□□□□ -0.12
FARP1-201ENST00000319562 LARP1BQ659C4 914 aaKnown RBP14.28□□□□□ -0.12
FARP1-201ENST00000319562 DNAJC2Q99543 621 aaKnown RBP14.28□□□□□ -0.12
FARP1-201ENST00000319562 NUP62CLQ9H1M0 184 aa14.28□□□□□ -0.12
FARP1-201ENST00000319562 CCDC158Q5M9N0 1113 aa14.28□□□□□ -0.12
FARP1-201ENST00000319562 DNAI2Q9GZS0 605 aa14.28□□□□□ -0.12
FARP1-201ENST00000319562 GCOM1H8Y6P7 765 aaPredicted RBP14.28□□□□□ -0.12
FARP1-201ENST00000319562 MYZAPP0CAP1 466 aa14.28□□□□□ -0.12
FARP1-201ENST00000319562 SPATA32Q96LK8 384 aa14.28□□□□□ -0.12
FARP1-201ENST00000319562 KIF18AQ8NI77 898 aa14.28□□□□□ -0.12
FARP1-201ENST00000319562 KIF6Q6ZMV9 814 aa14.27□□□□□ -0.12
FARP1-201ENST00000319562 BRD4O60885 1362 aaPredicted RBP14.27□□□□□ -0.12
FARP1-201ENST00000319562 CCDC97Q96F63 343 aaPredicted RBP14.27□□□□□ -0.13
FARP1-201ENST00000319562 EIF5P55010 431 aaKnown RBP14.27□□□□□ -0.13
FARP1-201ENST00000319562 SRCIN1Q9C0H9 1055 aa14.27□□□□□ -0.13
FARP1-201ENST00000319562 PTPN14Q15678 1187 aa14.27□□□□□ -0.13
FARP1-201ENST00000319562 CASQ1P31415 396 aa14.27□□□□□ -0.13
FARP1-201ENST00000319562 KAT6BQ8WYB5 2073 aa14.27□□□□□ -0.13
FARP1-201ENST00000319562 TTC39AQ5SRH9 613 aa14.26□□□□□ -0.13
FARP1-201ENST00000319562 SOGA3Q5TF21 947 aa14.26□□□□□ -0.13
FARP1-201ENST00000319562 ZSCAN30Q86W11 494 aa14.26□□□□□ -0.13
FARP1-201ENST00000319562 KIF5CO60282 957 aa14.26□□□□□ -0.13
FARP1-201ENST00000319562 DHX57Q6P158 1386 aaKnown RBP14.26□□□□□ -0.13
FARP1-201ENST00000319562 PPP1R12BO60237 982 aaPredicted RBP14.26□□□□□ -0.13
FARP1-201ENST00000319562 ANAPC15P60006 121 aa14.26□□□□□ -0.13
FARP1-201ENST00000319562 CGNQ9P2M7 1197 aaKnown RBP14.26□□□□□ -0.13
FARP1-201ENST00000319562 CEP131Q9UPN4 1083 aa14.26□□□□□ -0.13
FARP1-201ENST00000319562 ZSCAN25Q6NSZ9 544 aa14.25□□□□□ -0.13
FARP1-201ENST00000319562 IL27Q8NEV9 243 aa14.25□□□□□ -0.13
FARP1-201ENST00000319562 SMC1AQ14683 1233 aaKnown RBP14.25□□□□□ -0.13
FARP1-201ENST00000319562 SPA17Q15506 151 aa14.25□□□□□ -0.13
FARP1-201ENST00000319562 PDE3AQ14432 1141 aa14.25□□□□□ -0.13
FARP1-201ENST00000319562 MAP3K11Q16584 847 aa14.25□□□□□ -0.13
FARP1-201ENST00000319562 FILIP1Q7Z7B0 1213 aa14.24□□□□□ -0.13
FARP1-201ENST00000319562 TICAM2Q86XR7 235 aa14.24□□□□□ -0.13
FARP1-201ENST00000319562 WASF1Q92558 559 aa14.24□□□□□ -0.13
FARP1-201ENST00000319562 HMOX1P09601 288 aa14.24□□□□□ -0.13
FARP1-201ENST00000319562 STAC3Q96MF2 364 aa14.24□□□□□ -0.13
FARP1-201ENST00000319562 CNTLNQ9NXG0 1405 aa14.24□□□□□ -0.13
FARP1-201ENST00000319562 PRDM2Q13029 1718 aa14.24□□□□□ -0.13
FARP1-201ENST00000319562 ZSCAN31Q96LW9 406 aaPredicted RBP14.24□□□□□ -0.13
FARP1-201ENST00000319562 IFFO1Q0D2I5 559 aa14.24□□□□□ -0.13
FARP1-201ENST00000319562 LUZP1Q86V48 1076 aa14.24□□□□□ -0.13
FARP1-201ENST00000319562 CFAP100Q494V2 611 aa14.24□□□□□ -0.13
FARP1-201ENST00000319562 SFPQP23246 707 aaKnown RBP eCLIP14.24□□□□□ -0.136e-7■■■□□ 15.6
FARP1-201ENST00000319562 CCDC113Q9H0I3 377 aa14.24□□□□□ -0.13
FARP1-201ENST00000319562 ANKRD18BA2A2Z9 1011 aa14.23□□□□□ -0.13
FARP1-201ENST00000319562 MEX3CQ5U5Q3 659 aaKnown RBP14.23□□□□□ -0.13
FARP1-201ENST00000319562 VPS36Q86VN1 386 aa14.23□□□□□ -0.13
FARP1-201ENST00000319562 CCDC83Q8IWF9 413 aa14.23□□□□□ -0.13
FARP1-201ENST00000319562 SSR1P43307 286 aaKnown RBP14.23□□□□□ -0.13
FARP1-201ENST00000319562 KRT32Q14532 448 aa14.23□□□□□ -0.13
FARP1-201ENST00000319562 PDZRN3Q9UPQ7 1066 aa14.23□□□□□ -0.13
FARP1-201ENST00000319562 PPP6R1Q9UPN7 881 aa14.22□□□□□ -0.13
FARP1-201ENST00000319562 CCDC175P0C221 793 aa14.22□□□□□ -0.13
FARP1-201ENST00000319562 GIGYF2Q6Y7W6 1299 aaKnown RBP14.22□□□□□ -0.13
FARP1-201ENST00000319562 GAS2L2Q8NHY3 880 aa14.22□□□□□ -0.13
FARP1-201ENST00000319562 TAOK3Q9H2K8 898 aa14.22□□□□□ -0.13
FARP1-201ENST00000319562 RRBP1Q9P2E9 1410 aaKnown RBP14.22□□□□□ -0.13
FARP1-201ENST00000319562 POTEB2H3BUK9 544 aa14.22□□□□□ -0.13
FARP1-201ENST00000319562 CFAP57Q96MR6 1250 aa14.22□□□□□ -0.13
FARP1-201ENST00000319562 CCT4P50991 539 aaKnown RBP14.22□□□□□ -0.13
FARP1-201ENST00000319562 STK3Q13188 491 aa14.22□□□□□ -0.13
FARP1-201ENST00000319562 BLOC1S2Q6QNY1 142 aa14.22□□□□□ -0.13
FARP1-201ENST00000319562 CNNM1Q9NRU3 951 aa14.21□□□□□ -0.13
FARP1-201ENST00000319562 CTNNA3Q9UI47 895 aa14.21□□□□□ -0.13
FARP1-201ENST00000319562 ATP2B2Q01814 1243 aa14.21□□□□□ -0.13
FARP1-201ENST00000319562 MATR3P43243 847 aaKnown RBP eCLIP14.21□□□□□ -0.144e-7■■■□□ 17.4
FARP1-201ENST00000319562 CCDC7Q96M83 1385 aa14.2□□□□□ -0.14
FARP1-201ENST00000319562 HOOK3Q86VS8 718 aa14.2□□□□□ -0.14
FARP1-201ENST00000319562 FGFR1OPO95684 399 aaKnown RBP14.2□□□□□ -0.14
FARP1-201ENST00000319562 GSTTP1A0A1W2PQM5 241 aa14.2□□□□□ -0.14
FARP1-201ENST00000319562 RAPGEF2Q9Y4G8 1499 aa14.2□□□□□ -0.14
FARP1-201ENST00000319562 POLR3GO15318 223 aaPredicted RBP14.2□□□□□ -0.14
FARP1-201ENST00000319562 MCM4P33991 863 aa14.2□□□□□ -0.14
FARP1-201ENST00000319562 FKBP15Q5T1M5 1219 aa14.2□□□□□ -0.14
FARP1-201ENST00000319562 RNF187Q5TA31 235 aaPredicted RBP14.2□□□□□ -0.14
FARP1-201ENST00000319562 SPECC1LQ69YQ0 1117 aa14.2□□□□□ -0.14
FARP1-201ENST00000319562 SMG6Q86US8 1419 aaKnown RBP14.2□□□□□ -0.14
FARP1-201ENST00000319562 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
FARP1-201ENST00000319562 NAA15Q9BXJ9 866 aaKnown RBP14.19□□□□□ -0.14
FARP1-201ENST00000319562 PAFAH1B1P43034 410 aa14.19□□□□□ -0.14
FARP1-201ENST00000319562 SMARCA2P51531 1590 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms