RNA–Protein interactions for RNA: ENST00000302979.4

POLR1D-201, Transcript of RNA polymerase I and III subunit D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR1D, Length 1,166 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-201ENST00000302979 NSD2O96028 1365 aa36.13■■■■□ 3.37
POLR1D-201ENST00000302979 GJD4Q96KN9 370 aaPredicted RBP36.12■■■■□ 3.37
POLR1D-201ENST00000302979 AXIN2Q9Y2T1 843 aa36.12■■■■□ 3.37
POLR1D-201ENST00000302979 RGS12O14924 1447 aa36.11■■■■□ 3.37
POLR1D-201ENST00000302979 PER1O15534 1290 aaPredicted RBP36.11■■■■□ 3.37
POLR1D-201ENST00000302979 FBLN1P23142 703 aa36.11■■■■□ 3.37
POLR1D-201ENST00000302979 PEAK1Q9H792 1746 aa36.08■■■■□ 3.37
POLR1D-201ENST00000302979 STRN4Q9NRL3 753 aa36.08■■■■□ 3.37
POLR1D-201ENST00000302979 MAP3K19Q56UN5 1328 aa36.08■■■■□ 3.37
POLR1D-201ENST00000302979 AMER1Q5JTC6 1135 aaPredicted RBP36.07■■■■□ 3.36
POLR1D-201ENST00000302979 KNSTRNQ9Y448 316 aa36.07■■■■□ 3.36
POLR1D-201ENST00000302979 SPATA31A5Q5VU36 1347 aa36.06■■■■□ 3.36
POLR1D-201ENST00000302979 SPATA31A7Q8IWB4 1347 aa36.06■■■■□ 3.36
POLR1D-201ENST00000302979 RRS1Q15050 365 aaKnown RBP36.03■■■■□ 3.36
POLR1D-201ENST00000302979 LARP1Q6PKG0 1096 aaKnown RBP36.03■■■■□ 3.36
POLR1D-201ENST00000302979 RTL1A6NKG5 1358 aa36.02■■■■□ 3.36
POLR1D-201ENST00000302979 BLMP54132 1417 aaPredicted RBP36.02■■■■□ 3.36
POLR1D-201ENST00000302979 CCDC9Q9Y3X0 531 aaKnown RBP36.02■■■■□ 3.36
POLR1D-201ENST00000302979 MAP2P11137 1827 aaKnown RBP36.01■■■■□ 3.36
POLR1D-201ENST00000302979 SPATA31A1Q5TZJ5 1347 aa36.01■■■■□ 3.35
POLR1D-201ENST00000302979 THSD7AQ9UPZ6 1657 aa36■■■■□ 3.35
POLR1D-201ENST00000302979 CRB1P82279 1406 aa36■■■■□ 3.35
POLR1D-201ENST00000302979 EVA1CP58658 441 aa36■■■■□ 3.35
POLR1D-201ENST00000302979 WDR17Q8IZU2 1322 aa35.99■■■■□ 3.35
POLR1D-201ENST00000302979 IP6K1Q92551 441 aa35.98■■■■□ 3.35
POLR1D-201ENST00000302979 WNK3Q9BYP7 1800 aa35.98■■■■□ 3.35
POLR1D-201ENST00000302979 ERBB3P21860 1342 aa35.98■■■■□ 3.35
POLR1D-201ENST00000302979 FAM208AQ9UK61 1670 aaKnown RBP35.97■■■■□ 3.35
POLR1D-201ENST00000302979 HOXC9P31274 260 aa35.97■■■■□ 3.35
POLR1D-201ENST00000302979 NPC1L1Q9UHC9 1359 aa35.97■■■■□ 3.35
POLR1D-201ENST00000302979 KIF24Q5T7B8 1368 aa35.95■■■■□ 3.35
POLR1D-201ENST00000302979 BRWD3Q6RI45 1802 aa35.94■■■■□ 3.34
POLR1D-201ENST00000302979 EMILIN1Q9Y6C2 1016 aa35.94■■■■□ 3.34
POLR1D-201ENST00000302979 ONECUT3O60422 494 aaPredicted RBP35.93■■■■□ 3.34
POLR1D-201ENST00000302979 AMPHP49418 695 aa35.93■■■■□ 3.34
POLR1D-201ENST00000302979 SMG6Q86US8 1419 aaKnown RBP35.92■■■■□ 3.34
POLR1D-201ENST00000302979 FLT4P35916 1363 aa35.92■■■■□ 3.34
POLR1D-201ENST00000302979 FAM98CQ17RN3 349 aaKnown RBP35.91■■■■□ 3.34
POLR1D-201ENST00000302979 TNNT2P45379 298 aaPredicted RBP35.9■■■■□ 3.34
POLR1D-201ENST00000302979 MORC1Q86VD1 984 aa35.9■■■■□ 3.34
POLR1D-201ENST00000302979 ANKRD24Q8TF21 1146 aa35.9■■■■□ 3.34
POLR1D-201ENST00000302979 USP35Q9P2H5 1018 aa35.9■■■■□ 3.34
POLR1D-201ENST00000302979 TOM1L2Q6ZVM7 507 aa35.89■■■■□ 3.34
POLR1D-201ENST00000302979 POLKQ9UBT6 870 aa35.89■■■■□ 3.34
POLR1D-201ENST00000302979 RGPD2P0DJD1 1756 aa35.89■■■■□ 3.34
POLR1D-201ENST00000302979 CSB-PGBD3P0DP91 1061 aa35.87■■■■□ 3.33
POLR1D-201ENST00000302979 CC2D1BQ5T0F9 858 aaKnown RBP35.87■■■■□ 3.33
POLR1D-201ENST00000302979 TCP11L2Q8N4U5 519 aa35.87■■■■□ 3.33
POLR1D-201ENST00000302979 PARP4Q9UKK3 1724 aaKnown RBP35.87■■■■□ 3.33
POLR1D-201ENST00000302979 INSRP06213 1382 aa35.87■■■■□ 3.33
POLR1D-201ENST00000302979 BARGINQ6ZT62 677 aa35.86■■■■□ 3.33
POLR1D-201ENST00000302979 SEPT12Q8IYM1 358 aa35.85■■■■□ 3.33
POLR1D-201ENST00000302979 CARD10Q9BWT7 1032 aa35.85■■■■□ 3.33
POLR1D-201ENST00000302979 THRAP3Q9Y2W1 955 aaKnown RBP35.85■■■■□ 3.33
POLR1D-201ENST00000302979 HSP90AB2PQ58FF8 381 aa35.84■■■■□ 3.33
POLR1D-201ENST00000302979 LRRC37A3O60309 1634 aa35.83■■■■□ 3.33
POLR1D-201ENST00000302979 DISP2A7MBM2 1401 aa35.82■■■■□ 3.32
POLR1D-201ENST00000302979 LTV1Q96GA3 475 aaPredicted RBP35.81■■■■□ 3.32
POLR1D-201ENST00000302979 PPM1GO15355 546 aaPredicted RBP35.78■■■■□ 3.32
POLR1D-201ENST00000302979 DDX10Q13206 875 aaKnown RBP35.77■■■■□ 3.32
POLR1D-201ENST00000302979 NLRP2Q9NX02 1062 aa35.77■■■■□ 3.32
POLR1D-201ENST00000302979 A0A0G2JS52 829 aa35.76■■■■□ 3.32
POLR1D-201ENST00000302979 MYT1Q01538 1121 aa35.76■■■■□ 3.32
POLR1D-201ENST00000302979 CNGB1Q14028 1251 aaPredicted RBP35.75■■■■□ 3.31
POLR1D-201ENST00000302979 EP400Q96L91 3159 aa35.74■■■■□ 3.31
POLR1D-201ENST00000302979 SOCS7O14512 581 aa35.72■■■■□ 3.31
POLR1D-201ENST00000302979 ZNF316A6NFI3 1004 aaPredicted RBP35.71■■■■□ 3.31
POLR1D-201ENST00000302979 NCAPD2Q15021 1401 aa35.71■■■■□ 3.31
POLR1D-201ENST00000302979 NBPF6Q5VWK0 638 aa35.69■■■■□ 3.3
POLR1D-201ENST00000302979 NBPF4Q96M43 638 aa35.69■■■■□ 3.3
POLR1D-201ENST00000302979 KRT27Q7Z3Y8 459 aa35.68■■■■□ 3.3
POLR1D-201ENST00000302979 EIF4A2Q14240 407 aaKnown RBP35.66■■■■□ 3.3
POLR1D-201ENST00000302979 TNS2Q63HR2 1409 aa35.66■■■■□ 3.3
POLR1D-201ENST00000302979 PARD3Q8TEW0 1356 aa35.65■■■■□ 3.3
POLR1D-201ENST00000302979 MTHFSP49914 203 aa35.65■■■■□ 3.3
POLR1D-201ENST00000302979 CDCA7Q9BWT1 371 aaPredicted RBP35.65■■■■□ 3.3
POLR1D-201ENST00000302979 MEGF6O75095 1541 aa35.65■■■■□ 3.3
POLR1D-201ENST00000302979 RGPD1P0DJD0 1748 aa35.65■■■■□ 3.3
POLR1D-201ENST00000302979 COL3A1P02461 1466 aaPredicted RBP35.63■■■■□ 3.29
POLR1D-201ENST00000302979 USHBP1Q8N6Y0 703 aa35.63■■■■□ 3.29
POLR1D-201ENST00000302979 IL2RBP14784 551 aa35.62■■■■□ 3.29
POLR1D-201ENST00000302979 SHANK3Q9BYB0 1731 aa35.62■■■■□ 3.29
POLR1D-201ENST00000302979 DDB1Q16531 1140 aa35.59■■■■□ 3.29
POLR1D-201ENST00000302979 EYA1Q99502 592 aa35.59■■■■□ 3.29
POLR1D-201ENST00000302979 OVOS2A0A0G2JMS6 1433 aa35.57■■■■□ 3.29
POLR1D-201ENST00000302979 FAM182BQ5T319 152 aa35.57■■■■□ 3.28
POLR1D-201ENST00000302979 PPP2R1AP30153 589 aa35.56■■■■□ 3.28
POLR1D-201ENST00000302979 IGSF1Q8N6C5 1336 aa35.56■■■■□ 3.28
POLR1D-201ENST00000302979 PDE3BQ13370 1112 aa35.55■■■■□ 3.28
POLR1D-201ENST00000302979 UPF1Q92900 1129 aaKnown RBP eCLIP35.55■■■■□ 3.28
POLR1D-201ENST00000302979 PKD1L3Q7Z443 1732 aa35.54■■■■□ 3.28
POLR1D-201ENST00000302979 IL13P35225 146 aa35.53■■■■□ 3.28
POLR1D-201ENST00000302979 EXOC5O00471 708 aa35.5■■■■□ 3.27
POLR1D-201ENST00000302979 MARCH10Q8NA82 808 aaPredicted RBP35.49■■■■□ 3.27
POLR1D-201ENST00000302979 TNS1Q9HBL0 1735 aaKnown RBP35.49■■■■□ 3.27
POLR1D-201ENST00000302979 SBF2Q86WG5 1849 aa35.48■■■■□ 3.27
POLR1D-201ENST00000302979 RAPGEF4Q8WZA2 1011 aa35.47■■■■□ 3.27
POLR1D-201ENST00000302979 BCL9O00512 1426 aa35.46■■■■□ 3.27
POLR1D-201ENST00000302979 KDRP35968 1356 aa35.45■■■■□ 3.27
POLR1D-201ENST00000302979 RALBP1Q15311 655 aa35.44■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms