RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 PDE3BQ13370 1112 aa9.59□□□□□ -0.87
ITGB1-201ENST00000302278 SAFB2Q14151 953 aaKnown RBP eCLIP9.59□□□□□ -0.87
ITGB1-201ENST00000302278 HIRIP3Q9BW71 556 aaPredicted RBP9.59□□□□□ -0.87
ITGB1-201ENST00000302278 CHRNA2Q15822 529 aa9.58□□□□□ -0.88
ITGB1-201ENST00000302278 PPARGC1BQ86YN6 1023 aaKnown RBP9.58□□□□□ -0.88
ITGB1-201ENST00000302278 CDK19Q9BWU1 502 aa9.58□□□□□ -0.88
ITGB1-201ENST00000302278 GCP02774 474 aa9.57□□□□□ -0.88
ITGB1-201ENST00000302278 PROM2Q8N271 834 aa9.57□□□□□ -0.88
ITGB1-201ENST00000302278 ANO8Q9HCE9 1232 aaPredicted RBP9.57□□□□□ -0.88
ITGB1-201ENST00000302278 WDR17Q8IZU2 1322 aa9.57□□□□□ -0.88
ITGB1-201ENST00000302278 NLRP13Q86W25 1043 aa9.57□□□□□ -0.88
ITGB1-201ENST00000302278 STRN4Q9NRL3 753 aa9.56□□□□□ -0.88
ITGB1-201ENST00000302278 PAK3O75914 559 aaPredicted RBP9.56□□□□□ -0.88
ITGB1-201ENST00000302278 ZC3H6P61129 1189 aaKnown RBP9.55□□□□□ -0.88
ITGB1-201ENST00000302278 CCDC7Q96M83 1385 aa9.55□□□□□ -0.88
ITGB1-201ENST00000302278 EVA1CP58658 441 aa9.55□□□□□ -0.88
ITGB1-201ENST00000302278 USP31Q70CQ4 1352 aa9.54□□□□□ -0.88
ITGB1-201ENST00000302278 DCAF8L1A6NGE4 600 aa9.54□□□□□ -0.88
ITGB1-201ENST00000302278 ABTB2Q8N961 1025 aa9.54□□□□□ -0.88
ITGB1-201ENST00000302278 ZNF784Q8NCA9 323 aaPredicted RBP9.54□□□□□ -0.88
ITGB1-201ENST00000302278 DCAF11Q8TEB1 546 aa9.54□□□□□ -0.88
ITGB1-201ENST00000302278 CARD10Q9BWT7 1032 aa9.54□□□□□ -0.88
ITGB1-201ENST00000302278 MARCH10Q8NA82 808 aaPredicted RBP9.53□□□□□ -0.88
ITGB1-201ENST00000302278 MTFR1LQ9H019 292 aa9.53□□□□□ -0.88
ITGB1-201ENST00000302278 PPP1R1BQ9UD71 204 aaPredicted RBP9.53□□□□□ -0.88
ITGB1-201ENST00000302278 DOT1LQ8TEK3 1739 aa9.53□□□□□ -0.88
ITGB1-201ENST00000302278 DDB1Q16531 1140 aa9.52□□□□□ -0.88
ITGB1-201ENST00000302278 TAF1LQ8IZX4 1826 aa9.52□□□□□ -0.89
ITGB1-201ENST00000302278 ARHGEF25Q86VW2 580 aa9.52□□□□□ -0.89
ITGB1-201ENST00000302278 CICQ96RK0 1608 aaPredicted RBP9.52□□□□□ -0.89
ITGB1-201ENST00000302278 SLC15A2Q16348 729 aa9.52□□□□□ -0.89
ITGB1-201ENST00000302278 TTC21AQ8NDW8 1320 aa9.52□□□□□ -0.89
ITGB1-201ENST00000302278 SBNO2Q9Y2G9 1366 aa9.51□□□□□ -0.89
ITGB1-201ENST00000302278 CD163L1Q9NR16 1453 aa9.51□□□□□ -0.89
ITGB1-201ENST00000302278 C5P01031 1676 aa9.51□□□□□ -0.89
ITGB1-201ENST00000302278 CENPJQ9HC77 1338 aaPredicted RBP9.5□□□□□ -0.89
ITGB1-201ENST00000302278 PLEKHG5O94827 1062 aa9.5□□□□□ -0.89
ITGB1-201ENST00000302278 SYT17Q9BSW7 474 aa9.5□□□□□ -0.89
ITGB1-201ENST00000302278 TXNRD1Q16881 649 aa9.5□□□□□ -0.89
ITGB1-201ENST00000302278 PTF1AQ7RTS3 328 aa9.5□□□□□ -0.89
ITGB1-201ENST00000302278 KCNH5Q8NCM2 988 aa9.5□□□□□ -0.89
ITGB1-201ENST00000302278 AXIN2Q9Y2T1 843 aa9.5□□□□□ -0.89
ITGB1-201ENST00000302278 C1QTNF8P60827 252 aa9.49□□□□□ -0.89
ITGB1-201ENST00000302278 NUTM2GQ5VZR2 741 aa9.49□□□□□ -0.89
ITGB1-201ENST00000302278 PDGFDQ9GZP0 370 aaPredicted RBP9.49□□□□□ -0.89
ITGB1-201ENST00000302278 STK32BQ9NY57 414 aa9.49□□□□□ -0.89
ITGB1-201ENST00000302278 USP35Q9P2H5 1018 aa9.49□□□□□ -0.89
ITGB1-201ENST00000302278 KIF13BQ9NQT8 1826 aa9.49□□□□□ -0.89
ITGB1-201ENST00000302278 FHDC1Q9C0D6 1143 aaPredicted RBP9.48□□□□□ -0.89
ITGB1-201ENST00000302278 TOGARAM1Q9Y4F4 1720 aa9.48□□□□□ -0.89
ITGB1-201ENST00000302278 ZNF692Q9BU19 519 aaPredicted RBP9.48□□□□□ -0.89
ITGB1-201ENST00000302278 AKT1S1Q96B36 256 aa9.47□□□□□ -0.89
ITGB1-201ENST00000302278 KIAA1551Q9HCM1 1747 aa9.47□□□□□ -0.89
ITGB1-201ENST00000302278 IFFO2Q5TF58 517 aa9.47□□□□□ -0.89
ITGB1-201ENST00000302278 SLC16A10Q8TF71 515 aa9.47□□□□□ -0.89
ITGB1-201ENST00000302278 ZNF831Q5JPB2 1677 aa9.47□□□□□ -0.89
ITGB1-201ENST00000302278 TTC21BQ7Z4L5 1316 aa9.47□□□□□ -0.89
ITGB1-201ENST00000302278 RGPD2P0DJD1 1756 aa9.46□□□□□ -0.89
ITGB1-201ENST00000302278 ADCY9O60503 1353 aa9.46□□□□□ -0.89
ITGB1-201ENST00000302278 KDM2AQ9Y2K7 1162 aa9.46□□□□□ -0.89
ITGB1-201ENST00000302278 PKD1L3Q7Z443 1732 aa9.46□□□□□ -0.89
ITGB1-201ENST00000302278 NSD2O96028 1365 aa9.46□□□□□ -0.9
ITGB1-201ENST00000302278 TOM1L2Q6ZVM7 507 aa9.46□□□□□ -0.9
ITGB1-201ENST00000302278 ANKRD26Q9UPS8 1709 aa9.46□□□□□ -0.9
ITGB1-201ENST00000302278 ZBTB7AO95365 584 aa9.45□□□□□ -0.9
ITGB1-201ENST00000302278 ERBB3P21860 1342 aa9.45□□□□□ -0.9
ITGB1-201ENST00000302278 NLRP6P59044 892 aa9.45□□□□□ -0.9
ITGB1-201ENST00000302278 NBPF1Q3BBV0 1214 aa9.45□□□□□ -0.9
ITGB1-201ENST00000302278 SLC27A3Q5K4L6 730 aa9.45□□□□□ -0.9
ITGB1-201ENST00000302278 ARXQ96QS3 562 aa9.45□□□□□ -0.9
ITGB1-201ENST00000302278 UBR3Q6ZT12 1888 aa9.44□□□□□ -0.9
ITGB1-201ENST00000302278 CABP1Q9NZU7 370 aa9.44□□□□□ -0.9
ITGB1-201ENST00000302278 EVC2Q86UK5 1308 aa9.44□□□□□ -0.9
ITGB1-201ENST00000302278 CABP2Q9NPB3 220 aa9.44□□□□□ -0.9
ITGB1-201ENST00000302278 MAP2P11137 1827 aaKnown RBP9.44□□□□□ -0.9
ITGB1-201ENST00000302278 EXOC5O00471 708 aa9.43□□□□□ -0.9
ITGB1-201ENST00000302278 SRPK2P78362 688 aaKnown RBP9.43□□□□□ -0.9
ITGB1-201ENST00000302278 ZNF827Q17R98 1081 aa9.43□□□□□ -0.9
ITGB1-201ENST00000302278 ITGB4P16144 1822 aa9.43□□□□□ -0.9
ITGB1-201ENST00000302278 EDC4Q6P2E9 1401 aaKnown RBP9.43□□□□□ -0.9
ITGB1-201ENST00000302278 PUS7Q96PZ0 661 aaKnown RBP9.42□□□□□ -0.9
ITGB1-201ENST00000302278 PNPLA7Q6ZV29 1317 aa9.42□□□□□ -0.9
ITGB1-201ENST00000302278 ANKRD36BQ8N2N9 1353 aa9.42□□□□□ -0.9
ITGB1-201ENST00000302278 ATF5Q9Y2D1 282 aaPredicted RBP9.42□□□□□ -0.9
ITGB1-201ENST00000302278 BRCA1P38398 1863 aaKnown RBP9.41□□□□□ -0.9
ITGB1-201ENST00000302278 LRRC4BQ9NT99 713 aa9.41□□□□□ -0.9
ITGB1-201ENST00000302278 C4BP0C0L5 1744 aa9.41□□□□□ -0.9
ITGB1-201ENST00000302278 KIF20BQ96Q89 1820 aa9.41□□□□□ -0.9
ITGB1-201ENST00000302278 KTN1Q86UP2 1357 aaKnown RBP9.41□□□□□ -0.9
ITGB1-201ENST00000302278 SENP3-EIF4A1A0A087X0R7 540 aa9.4□□□□□ -0.9
ITGB1-201ENST00000302278 IL2RBP14784 551 aa9.4□□□□□ -0.9
ITGB1-201ENST00000302278 NCAPD2Q15021 1401 aa9.4□□□□□ -0.91
ITGB1-201ENST00000302278 RTL1A6NKG5 1358 aa9.39□□□□□ -0.91
ITGB1-201ENST00000302278 GIGYF1O75420 1035 aaPredicted RBP9.39□□□□□ -0.91
ITGB1-201ENST00000302278 ARFGEF1Q9Y6D6 1849 aa9.37□□□□□ -0.91
ITGB1-201ENST00000302278 COL5A3P25940 1745 aaPredicted RBP9.37□□□□□ -0.91
ITGB1-201ENST00000302278 PLEKHG2Q9H7P9 1386 aa9.37□□□□□ -0.91
ITGB1-201ENST00000302278 HMGB2P26583 209 aaKnown RBP9.37□□□□□ -0.91
ITGB1-201ENST00000302278 MEGF6O75095 1541 aa9.37□□□□□ -0.91
ITGB1-201ENST00000302278 GRIN3BO60391 1043 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms