RNA–Protein interactions for RNA: ENST00000301904.3

SCARA3-201, Transcript of scavenger receptor class A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARA3, Length 3,510 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-201ENST00000301904 ITSN2Q9NZM3 1697 aa12.72□□□□□ -0.37
SCARA3-201ENST00000301904 IBTKQ9P2D0 1353 aaPredicted RBP12.71□□□□□ -0.37
SCARA3-201ENST00000301904 IPO8O15397 1037 aaKnown RBP12.71□□□□□ -0.37
SCARA3-201ENST00000301904 UTP14CQ5TAP6 766 aaKnown RBP12.71□□□□□ -0.37
SCARA3-201ENST00000301904 CYP2E1P05181 493 aaPredicted RBP12.71□□□□□ -0.37
SCARA3-201ENST00000301904 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.38
SCARA3-201ENST00000301904 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.38
SCARA3-201ENST00000301904 CDC42BPAQ5VT25 1732 aa12.7□□□□□ -0.38
SCARA3-201ENST00000301904 LETM1O95202 739 aaPredicted RBP12.7□□□□□ -0.38
SCARA3-201ENST00000301904 ADCY5O95622 1261 aa12.7□□□□□ -0.38
SCARA3-201ENST00000301904 NEK4P51957 841 aa12.7□□□□□ -0.38
SCARA3-201ENST00000301904 TSHZ3Q63HK5 1081 aa12.7□□□□□ -0.38
SCARA3-201ENST00000301904 TSPYL6Q8N831 410 aa12.7□□□□□ -0.38
SCARA3-201ENST00000301904 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
SCARA3-201ENST00000301904 USP26Q9BXU7 913 aa12.7□□□□□ -0.38
SCARA3-201ENST00000301904 PPIP5K1Q6PFW1 1433 aa12.7□□□□□ -0.38
SCARA3-201ENST00000301904 HCLS1P14317 486 aaPredicted RBP12.7□□□□□ -0.38
SCARA3-201ENST00000301904 CLEC17AQ6ZS10 378 aa12.7□□□□□ -0.38
SCARA3-201ENST00000301904 SYNMO15061 1565 aa12.7□□□□□ -0.38
SCARA3-201ENST00000301904 KIF20AO95235 890 aa12.7□□□□□ -0.38
SCARA3-201ENST00000301904 NAA30Q147X3 362 aaPredicted RBP12.7□□□□□ -0.38
SCARA3-201ENST00000301904 IFT140Q96RY7 1462 aa12.69□□□□□ -0.38
SCARA3-201ENST00000301904 ZBTB7BO15156 539 aaPredicted RBP12.69□□□□□ -0.38
SCARA3-201ENST00000301904 MCM5P33992 734 aa12.69□□□□□ -0.38
SCARA3-201ENST00000301904 RIOK3O14730 519 aaKnown RBP12.69□□□□□ -0.38
SCARA3-201ENST00000301904 ST18O60284 1047 aa12.69□□□□□ -0.38
SCARA3-201ENST00000301904 NPC1L1Q9UHC9 1359 aa12.69□□□□□ -0.38
SCARA3-201ENST00000301904 MAGI1Q96QZ7 1491 aaPredicted RBP12.69□□□□□ -0.38
SCARA3-201ENST00000301904 PLEKHM2Q8IWE5 1019 aa12.68□□□□□ -0.38
SCARA3-201ENST00000301904 PLXNC1O60486 1568 aa12.67□□□□□ -0.38
SCARA3-201ENST00000301904 CCDC27Q2M243 656 aa12.67□□□□□ -0.38
SCARA3-201ENST00000301904 GTPBP4Q9BZE4 634 aaKnown RBP12.67□□□□□ -0.38
SCARA3-201ENST00000301904 PYCARDQ9ULZ3 195 aa12.67□□□□□ -0.38
SCARA3-201ENST00000301904 MYO5CQ9NQX4 1742 aa12.67□□□□□ -0.38
SCARA3-201ENST00000301904 NUP160Q12769 1436 aa12.67□□□□□ -0.38
SCARA3-201ENST00000301904 PIBF1Q8WXW3 757 aa12.67□□□□□ -0.38
SCARA3-201ENST00000301904 CABP2Q9NPB3 220 aa12.67□□□□□ -0.38
SCARA3-201ENST00000301904 HDAC5Q9UQL6 1122 aa12.67□□□□□ -0.38
SCARA3-201ENST00000301904 CHMP3Q9Y3E7 222 aa12.67□□□□□ -0.38
SCARA3-201ENST00000301904 ERVK-7P63135 1459 aa12.67□□□□□ -0.38
SCARA3-201ENST00000301904 TNNT1P13805 278 aa12.66□□□□□ -0.38
SCARA3-201ENST00000301904 SDSP20132 328 aa12.66□□□□□ -0.38
SCARA3-201ENST00000301904 GCC1Q96CN9 775 aa12.66□□□□□ -0.38
SCARA3-201ENST00000301904 SHANK2Q9UPX8 1470 aa12.66□□□□□ -0.38
SCARA3-201ENST00000301904 ADAMTS12P58397 1594 aa12.66□□□□□ -0.38
SCARA3-201ENST00000301904 UPF3BQ9BZI7 483 aaKnown RBP12.66□□□□□ -0.38
SCARA3-201ENST00000301904 ATP10BO94823 1461 aa12.66□□□□□ -0.38
SCARA3-201ENST00000301904 TMX3Q96JJ7 454 aa12.66□□□□□ -0.38
SCARA3-201ENST00000301904 HMOX1P09601 288 aa12.65□□□□□ -0.38
SCARA3-201ENST00000301904 USP48Q86UV5 1035 aa12.65□□□□□ -0.38
SCARA3-201ENST00000301904 GRIN2AQ12879 1464 aa12.65□□□□□ -0.38
SCARA3-201ENST00000301904 EIF2AK4Q9P2K8 1649 aaKnown RBP12.65□□□□□ -0.38
SCARA3-201ENST00000301904 TAF3Q5VWG9 929 aa12.65□□□□□ -0.38
SCARA3-201ENST00000301904 TMX1Q9H3N1 280 aa12.65□□□□□ -0.38
SCARA3-201ENST00000301904 HMGN5P82970 282 aaKnown RBP12.64□□□□□ -0.39
SCARA3-201ENST00000301904 NCBP3Q53F19 620 aaKnown RBP12.64□□□□□ -0.39
SCARA3-201ENST00000301904 TTC22Q5TAA0 569 aa12.64□□□□□ -0.39
SCARA3-201ENST00000301904 PRIMPOLQ96LW4 560 aa12.64□□□□□ -0.39
SCARA3-201ENST00000301904 CWC22Q9HCG8 908 aaKnown RBP12.64□□□□□ -0.39
SCARA3-201ENST00000301904 SYNJ2O15056 1496 aa12.64□□□□□ -0.39
SCARA3-201ENST00000301904 IQSEC2Q5JU85 1478 aa12.64□□□□□ -0.39
SCARA3-201ENST00000301904 INTS3Q68E01 1043 aaKnown RBP12.64□□□□□ -0.39
SCARA3-201ENST00000301904 TEX2Q8IWB9 1127 aa12.64□□□□□ -0.39
SCARA3-201ENST00000301904 CD109Q6YHK3 1445 aa12.64□□□□□ -0.39
SCARA3-201ENST00000301904 GIMAP6Q6P9H5 292 aa12.63□□□□□ -0.39
SCARA3-201ENST00000301904 TARBP1Q13395 1621 aaKnown RBP12.63□□□□□ -0.39
SCARA3-201ENST00000301904 MBD3O95983 291 aa12.63□□□□□ -0.39
SCARA3-201ENST00000301904 CHAF1AQ13111 956 aaPredicted RBP12.63□□□□□ -0.39
SCARA3-201ENST00000301904 GPATCH11Q8N954 259 aa12.63□□□□□ -0.39
SCARA3-201ENST00000301904 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.63□□□□□ -0.39
SCARA3-201ENST00000301904 V9GYY5 206 aaPredicted RBP12.63□□□□□ -0.39
SCARA3-201ENST00000301904 SYCP2Q9BX26 1530 aa12.63□□□□□ -0.39
SCARA3-201ENST00000301904 MYOM1P52179 1685 aa12.62□□□□□ -0.39
SCARA3-201ENST00000301904 CCDC66A2RUB6 948 aa12.62□□□□□ -0.39
SCARA3-201ENST00000301904 AFAP1Q8N556 730 aa12.62□□□□□ -0.39
SCARA3-201ENST00000301904 PBRM1Q86U86 1689 aa12.62□□□□□ -0.39
SCARA3-201ENST00000301904 AP5Z1O43299 807 aa12.62□□□□□ -0.39
SCARA3-201ENST00000301904 KRT24Q2M2I5 525 aa12.62□□□□□ -0.39
SCARA3-201ENST00000301904 ZNF592Q92610 1267 aa12.62□□□□□ -0.39
SCARA3-201ENST00000301904 PLEKHF1Q96S99 279 aa12.62□□□□□ -0.39
SCARA3-201ENST00000301904 PALD1Q9ULE6 856 aa12.62□□□□□ -0.39
SCARA3-201ENST00000301904 CNPY2Q9Y2B0 182 aa12.62□□□□□ -0.39
SCARA3-201ENST00000301904 SCAPERQ9BY12 1400 aa12.62□□□□□ -0.39
SCARA3-201ENST00000301904 NPHP1O15259 732 aa12.62□□□□□ -0.39
SCARA3-201ENST00000301904 MYCNP04198 464 aaPredicted RBP12.62□□□□□ -0.39
SCARA3-201ENST00000301904 DNAJC2Q99543 621 aaKnown RBP12.62□□□□□ -0.39
SCARA3-201ENST00000301904 FIBPO43427 364 aa12.61□□□□□ -0.39
SCARA3-201ENST00000301904 STK26Q9P289 416 aa12.61□□□□□ -0.39
SCARA3-201ENST00000301904 C16orf45Q96MC5 204 aaPredicted RBP12.61□□□□□ -0.39
SCARA3-201ENST00000301904 TULP1O00294 542 aaPredicted RBP12.61□□□□□ -0.39
SCARA3-201ENST00000301904 LAMC1P11047 1609 aa12.6□□□□□ -0.39
SCARA3-201ENST00000301904 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
SCARA3-201ENST00000301904 FKBP5Q13451 457 aaPredicted RBP12.6□□□□□ -0.39
SCARA3-201ENST00000301904 MRPL50Q8N5N7 158 aaKnown RBP12.6□□□□□ -0.39
SCARA3-201ENST00000301904 KCNF1Q9H3M0 494 aa12.6□□□□□ -0.39
SCARA3-201ENST00000301904 NOS1P29475 1434 aa12.6□□□□□ -0.39
SCARA3-201ENST00000301904 CT47B1P0C2W7 299 aaPredicted RBP12.6□□□□□ -0.39
SCARA3-201ENST00000301904 PRKAR2BP31323 418 aa12.6□□□□□ -0.39
SCARA3-201ENST00000301904 DCTN1Q14203 1278 aa12.6□□□□□ -0.39
SCARA3-201ENST00000301904 C14orf37Q86TY3 774 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms