RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 KIF7Q2M1P5 1343 aa25.24■■□□□ 1.63
SPSB3-201ENST00000301717 COG3Q96JB2 828 aa25.24■■□□□ 1.63
SPSB3-201ENST00000301717 COL18A1P39060 1754 aa25.24■■□□□ 1.63
SPSB3-201ENST00000301717 SEPT12Q8IYM1 358 aa25.23■■□□□ 1.63
SPSB3-201ENST00000301717 SPATA31A1Q5TZJ5 1347 aa25.22■■□□□ 1.63
SPSB3-201ENST00000301717 A0A0G2JS52 829 aa25.21■■□□□ 1.63
SPSB3-201ENST00000301717 MYT1Q01538 1121 aa25.21■■□□□ 1.63
SPSB3-201ENST00000301717 PANK3Q9H999 370 aa25.2■■□□□ 1.63
SPSB3-201ENST00000301717 ONECUT3O60422 494 aaPredicted RBP25.18■■□□□ 1.62
SPSB3-201ENST00000301717 EP400Q96L91 3159 aa25.17■■□□□ 1.62
SPSB3-201ENST00000301717 RGPD5Q99666 1765 aa25.16■■□□□ 1.62
SPSB3-201ENST00000301717 KIF20BQ96Q89 1820 aa25.15■■□□□ 1.62
SPSB3-201ENST00000301717 RRS1Q15050 365 aaKnown RBP25.15■■□□□ 1.62
SPSB3-201ENST00000301717 UPF1Q92900 1129 aaKnown RBP eCLIP25.15■■□□□ 1.62
SPSB3-201ENST00000301717 MAP3K19Q56UN5 1328 aa25.15■■□□□ 1.62
SPSB3-201ENST00000301717 LTN1O94822 1766 aa25.14■■□□□ 1.62
SPSB3-201ENST00000301717 TOM1L2Q6ZVM7 507 aa25.14■■□□□ 1.62
SPSB3-201ENST00000301717 BRWD3Q6RI45 1802 aa25.14■■□□□ 1.62
SPSB3-201ENST00000301717 WASHC2AQ641Q2 1341 aa25.14■■□□□ 1.62
SPSB3-201ENST00000301717 CRB1P82279 1406 aa25.14■■□□□ 1.61
SPSB3-201ENST00000301717 CSB-PGBD3P0DP91 1061 aa25.13■■□□□ 1.61
SPSB3-201ENST00000301717 WDR17Q8IZU2 1322 aa25.13■■□□□ 1.61
SPSB3-201ENST00000301717 FAM182BQ5T319 152 aa25.12■■□□□ 1.61
SPSB3-201ENST00000301717 CCDC7Q96M83 1385 aa25.12■■□□□ 1.61
SPSB3-201ENST00000301717 TCP11L2Q8N4U5 519 aa25.12■■□□□ 1.61
SPSB3-201ENST00000301717 CGNL1Q0VF96 1302 aa25.11■■□□□ 1.61
SPSB3-201ENST00000301717 THSD7AQ9UPZ6 1657 aa25.11■■□□□ 1.61
SPSB3-201ENST00000301717 KRT27Q7Z3Y8 459 aa25.1■■□□□ 1.61
SPSB3-201ENST00000301717 LTV1Q96GA3 475 aaPredicted RBP25.1■■□□□ 1.61
SPSB3-201ENST00000301717 ERBB3P21860 1342 aa25.09■■□□□ 1.61
SPSB3-201ENST00000301717 ANKRD24Q8TF21 1146 aa25.09■■□□□ 1.61
SPSB3-201ENST00000301717 IP6K1Q92551 441 aa25.09■■□□□ 1.61
SPSB3-201ENST00000301717 ABCC6O95255 1503 aa25.08■■□□□ 1.61
SPSB3-201ENST00000301717 AMPHP49418 695 aa25.08■■□□□ 1.61
SPSB3-201ENST00000301717 BARGINQ6ZT62 677 aa25.08■■□□□ 1.61
SPSB3-201ENST00000301717 HOXC9P31274 260 aa25.07■■□□□ 1.6
SPSB3-201ENST00000301717 TNNT2P45379 298 aaPredicted RBP25.07■■□□□ 1.6
SPSB3-201ENST00000301717 EMILIN1Q9Y6C2 1016 aa25.06■■□□□ 1.6
SPSB3-201ENST00000301717 NLRP2Q9NX02 1062 aa25.05■■□□□ 1.6
SPSB3-201ENST00000301717 CARD10Q9BWT7 1032 aa25.04■■□□□ 1.6
SPSB3-201ENST00000301717 THRAP3Q9Y2W1 955 aaKnown RBP25.03■■□□□ 1.6
SPSB3-201ENST00000301717 BLMP54132 1417 aaPredicted RBP25.03■■□□□ 1.6
SPSB3-201ENST00000301717 PEAK1Q9H792 1746 aa25.03■■□□□ 1.6
SPSB3-201ENST00000301717 HSP90AB2PQ58FF8 381 aa25.02■■□□□ 1.6
SPSB3-201ENST00000301717 KNSTRNQ9Y448 316 aa25.02■■□□□ 1.6
SPSB3-201ENST00000301717 PPM1GO15355 546 aaPredicted RBP25■■□□□ 1.59
SPSB3-201ENST00000301717 CNGB1Q14028 1251 aaPredicted RBP25■■□□□ 1.59
SPSB3-201ENST00000301717 AMER1Q5JTC6 1135 aaPredicted RBP24.99■■□□□ 1.59
SPSB3-201ENST00000301717 RTL1A6NKG5 1358 aa24.99■■□□□ 1.59
SPSB3-201ENST00000301717 PER1O15534 1290 aaPredicted RBP24.98■■□□□ 1.59
SPSB3-201ENST00000301717 DISP2A7MBM2 1401 aa24.98■■□□□ 1.59
SPSB3-201ENST00000301717 POLKQ9UBT6 870 aa24.97■■□□□ 1.59
SPSB3-201ENST00000301717 PDE3BQ13370 1112 aa24.96■■□□□ 1.59
SPSB3-201ENST00000301717 ANKRD26Q9UPS8 1709 aa24.96■■□□□ 1.59
SPSB3-201ENST00000301717 LRRC37A3O60309 1634 aa24.96■■□□□ 1.59
SPSB3-201ENST00000301717 FLT4P35916 1363 aa24.96■■□□□ 1.59
SPSB3-201ENST00000301717 MORC1Q86VD1 984 aa24.95■■□□□ 1.59
SPSB3-201ENST00000301717 USHBP1Q8N6Y0 703 aa24.95■■□□□ 1.59
SPSB3-201ENST00000301717 PARP4Q9UKK3 1724 aaKnown RBP24.95■■□□□ 1.58
SPSB3-201ENST00000301717 NSD2O96028 1365 aa24.95■■□□□ 1.58
SPSB3-201ENST00000301717 WNK3Q9BYP7 1800 aa24.94■■□□□ 1.58
SPSB3-201ENST00000301717 DDB1Q16531 1140 aa24.94■■□□□ 1.58
SPSB3-201ENST00000301717 CC2D1BQ5T0F9 858 aaKnown RBP24.94■■□□□ 1.58
SPSB3-201ENST00000301717 INSRP06213 1382 aa24.93■■□□□ 1.58
SPSB3-201ENST00000301717 NBPF6Q5VWK0 638 aa24.93■■□□□ 1.58
SPSB3-201ENST00000301717 NBPF4Q96M43 638 aa24.93■■□□□ 1.58
SPSB3-201ENST00000301717 RGPD2P0DJD1 1756 aa24.92■■□□□ 1.58
SPSB3-201ENST00000301717 IL2RBP14784 551 aa24.89■■□□□ 1.58
SPSB3-201ENST00000301717 DEFB132Q7Z7B7 95 aa24.89■■□□□ 1.58
SPSB3-201ENST00000301717 MARCH10Q8NA82 808 aaPredicted RBP24.89■■□□□ 1.58
SPSB3-201ENST00000301717 KIF24Q5T7B8 1368 aa24.89■■□□□ 1.58
SPSB3-201ENST00000301717 MAP2P11137 1827 aaKnown RBP24.88■■□□□ 1.57
SPSB3-201ENST00000301717 CDCA7Q9BWT1 371 aaPredicted RBP24.88■■□□□ 1.57
SPSB3-201ENST00000301717 SMG6Q86US8 1419 aaKnown RBP24.88■■□□□ 1.57
SPSB3-201ENST00000301717 FAM208AQ9UK61 1670 aaKnown RBP24.88■■□□□ 1.57
SPSB3-201ENST00000301717 TRIM37O94972 964 aa24.87■■□□□ 1.57
SPSB3-201ENST00000301717 EXOC5O00471 708 aa24.86■■□□□ 1.57
SPSB3-201ENST00000301717 FAM196AQ6ZSG2 479 aa24.86■■□□□ 1.57
SPSB3-201ENST00000301717 MEGF6O75095 1541 aa24.86■■□□□ 1.57
SPSB3-201ENST00000301717 TNS2Q63HR2 1409 aa24.86■■□□□ 1.57
SPSB3-201ENST00000301717 CCDC125Q86Z20 511 aa24.84■■□□□ 1.57
SPSB3-201ENST00000301717 OVOS2A0A0G2JMS6 1433 aa24.83■■□□□ 1.57
SPSB3-201ENST00000301717 EIF4A2Q14240 407 aaKnown RBP24.83■■□□□ 1.57
SPSB3-201ENST00000301717 PTF1AQ7RTS3 328 aa24.83■■□□□ 1.57
SPSB3-201ENST00000301717 SF3B2Q13435 895 aaKnown RBP24.82■■□□□ 1.56
SPSB3-201ENST00000301717 ZEB1P37275 1124 aaPredicted RBP24.81■■□□□ 1.56
SPSB3-201ENST00000301717 EYA1Q99502 592 aa24.81■■□□□ 1.56
SPSB3-201ENST00000301717 DDX54Q8TDD1 881 aaKnown RBP24.79■■□□□ 1.56
SPSB3-201ENST00000301717 EN1Q05925 392 aaPredicted RBP24.78■■□□□ 1.56
SPSB3-201ENST00000301717 TNS1Q9HBL0 1735 aaKnown RBP24.78■■□□□ 1.56
SPSB3-201ENST00000301717 NPC1L1Q9UHC9 1359 aa24.77■■□□□ 1.56
SPSB3-201ENST00000301717 MTHFSP49914 203 aa24.77■■□□□ 1.56
SPSB3-201ENST00000301717 RAPGEF4Q8WZA2 1011 aa24.77■■□□□ 1.56
SPSB3-201ENST00000301717 RGPD1P0DJD0 1748 aa24.76■■□□□ 1.55
SPSB3-201ENST00000301717 ACSBG1Q96GR2 724 aa24.76■■□□□ 1.55
SPSB3-201ENST00000301717 APBA3O96018 575 aa24.75■■□□□ 1.55
SPSB3-201ENST00000301717 BAG6P46379 1132 aa24.75■■□□□ 1.55
SPSB3-201ENST00000301717 NCAPD2Q15021 1401 aa24.75■■□□□ 1.55
SPSB3-201ENST00000301717 KCNQ2O43526 872 aa24.74■■□□□ 1.55
SPSB3-201ENST00000301717 TATP17735 454 aaPredicted RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms