RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 PANK3Q9H999 370 aa32.35■■■□□ 2.77
GBX1-201ENST00000297537 SPATA31A1Q5TZJ5 1347 aa32.34■■■□□ 2.77
GBX1-201ENST00000297537 LARP1Q6PKG0 1096 aaKnown RBP32.33■■■□□ 2.77
GBX1-201ENST00000297537 ABCC6O95255 1503 aa32.31■■■□□ 2.76
GBX1-201ENST00000297537 SEPT12Q8IYM1 358 aa32.29■■■□□ 2.76
GBX1-201ENST00000297537 CGNL1Q0VF96 1302 aa32.28■■■□□ 2.76
GBX1-201ENST00000297537 FBLN1P23142 703 aa32.28■■■□□ 2.76
GBX1-201ENST00000297537 FAM98CQ17RN3 349 aaKnown RBP32.28■■■□□ 2.76
GBX1-201ENST00000297537 KIF20BQ96Q89 1820 aa32.27■■■□□ 2.76
GBX1-201ENST00000297537 WASHC2AQ641Q2 1341 aa32.26■■■□□ 2.76
GBX1-201ENST00000297537 CCDC7Q96M83 1385 aa32.26■■■□□ 2.75
GBX1-201ENST00000297537 CRB1P82279 1406 aa32.25■■■□□ 2.75
GBX1-201ENST00000297537 WDR17Q8IZU2 1322 aa32.25■■■□□ 2.75
GBX1-201ENST00000297537 LTN1O94822 1766 aa32.24■■■□□ 2.75
GBX1-201ENST00000297537 BARGINQ6ZT62 677 aa32.24■■■□□ 2.75
GBX1-201ENST00000297537 MAP3K19Q56UN5 1328 aa32.24■■■□□ 2.75
GBX1-201ENST00000297537 RGPD5Q99666 1765 aa32.23■■■□□ 2.75
GBX1-201ENST00000297537 IP6K1Q92551 441 aa32.23■■■□□ 2.75
GBX1-201ENST00000297537 TCP11L2Q8N4U5 519 aa32.22■■■□□ 2.75
GBX1-201ENST00000297537 USP35Q9P2H5 1018 aa32.22■■■□□ 2.75
GBX1-201ENST00000297537 THRAP3Q9Y2W1 955 aaKnown RBP32.22■■■□□ 2.75
GBX1-201ENST00000297537 TOM1L2Q6ZVM7 507 aa32.19■■■□□ 2.74
GBX1-201ENST00000297537 ERBB3P21860 1342 aa32.19■■■□□ 2.74
GBX1-201ENST00000297537 BLMP54132 1417 aaPredicted RBP32.18■■■□□ 2.74
GBX1-201ENST00000297537 THSD7AQ9UPZ6 1657 aa32.18■■■□□ 2.74
GBX1-201ENST00000297537 RRS1Q15050 365 aaKnown RBP32.18■■■□□ 2.74
GBX1-201ENST00000297537 PER1O15534 1290 aaPredicted RBP32.17■■■□□ 2.74
GBX1-201ENST00000297537 HOXC9P31274 260 aa32.17■■■□□ 2.74
GBX1-201ENST00000297537 UPF1Q92900 1129 aaKnown RBP eCLIP32.17■■■□□ 2.74
GBX1-201ENST00000297537 BRWD3Q6RI45 1802 aa32.16■■■□□ 2.74
GBX1-201ENST00000297537 EP400Q96L91 3159 aa32.16■■■□□ 2.74
GBX1-201ENST00000297537 CARD10Q9BWT7 1032 aa32.16■■■□□ 2.74
GBX1-201ENST00000297537 KNSTRNQ9Y448 316 aa32.15■■■□□ 2.74
GBX1-201ENST00000297537 CSB-PGBD3P0DP91 1061 aa32.14■■■□□ 2.74
GBX1-201ENST00000297537 AMPHP49418 695 aa32.14■■■□□ 2.74
GBX1-201ENST00000297537 KRT27Q7Z3Y8 459 aa32.14■■■□□ 2.74
GBX1-201ENST00000297537 ANKRD24Q8TF21 1146 aa32.14■■■□□ 2.74
GBX1-201ENST00000297537 NSD2O96028 1365 aa32.14■■■□□ 2.74
GBX1-201ENST00000297537 A0A0G2JS52 829 aa32.13■■■□□ 2.73
GBX1-201ENST00000297537 RTL1A6NKG5 1358 aa32.13■■■□□ 2.73
GBX1-201ENST00000297537 MYT1Q01538 1121 aa32.13■■■□□ 2.73
GBX1-201ENST00000297537 AMER1Q5JTC6 1135 aaPredicted RBP32.12■■■□□ 2.73
GBX1-201ENST00000297537 KIF24Q5T7B8 1368 aa32.11■■■□□ 2.73
GBX1-201ENST00000297537 ZEB1P37275 1124 aaPredicted RBP32.1■■■□□ 2.73
GBX1-201ENST00000297537 ANKRD26Q9UPS8 1709 aa32.09■■■□□ 2.73
GBX1-201ENST00000297537 EMILIN1Q9Y6C2 1016 aa32.07■■■□□ 2.72
GBX1-201ENST00000297537 NLRP2Q9NX02 1062 aa32.06■■■□□ 2.72
GBX1-201ENST00000297537 POLKQ9UBT6 870 aa32.06■■■□□ 2.72
GBX1-201ENST00000297537 PEAK1Q9H792 1746 aa32.06■■■□□ 2.72
GBX1-201ENST00000297537 FLT4P35916 1363 aa32.06■■■□□ 2.72
GBX1-201ENST00000297537 HSP90AB2PQ58FF8 381 aa32.05■■■□□ 2.72
GBX1-201ENST00000297537 DISP2A7MBM2 1401 aa32.04■■■□□ 2.72
GBX1-201ENST00000297537 CDCA7Q9BWT1 371 aaPredicted RBP32.04■■■□□ 2.72
GBX1-201ENST00000297537 INSRP06213 1382 aa32.04■■■□□ 2.72
GBX1-201ENST00000297537 LTV1Q96GA3 475 aaPredicted RBP32.03■■■□□ 2.72
GBX1-201ENST00000297537 PARP4Q9UKK3 1724 aaKnown RBP32.03■■■□□ 2.72
GBX1-201ENST00000297537 TNNT2P45379 298 aaPredicted RBP32.01■■■□□ 2.71
GBX1-201ENST00000297537 MORC1Q86VD1 984 aa32.01■■■□□ 2.71
GBX1-201ENST00000297537 MAP2P11137 1827 aaKnown RBP32■■■□□ 2.71
GBX1-201ENST00000297537 FAM182BQ5T319 152 aa31.99■■■□□ 2.71
GBX1-201ENST00000297537 NPC1L1Q9UHC9 1359 aa31.98■■■□□ 2.71
GBX1-201ENST00000297537 PDE3BQ13370 1112 aa31.98■■■□□ 2.71
GBX1-201ENST00000297537 CCDC125Q86Z20 511 aa31.98■■■□□ 2.71
GBX1-201ENST00000297537 FAM208AQ9UK61 1670 aaKnown RBP31.97■■■□□ 2.71
GBX1-201ENST00000297537 WNK3Q9BYP7 1800 aa31.97■■■□□ 2.71
GBX1-201ENST00000297537 PPM1GO15355 546 aaPredicted RBP31.96■■■□□ 2.71
GBX1-201ENST00000297537 DDB1Q16531 1140 aa31.96■■■□□ 2.71
GBX1-201ENST00000297537 NBPF6Q5VWK0 638 aa31.95■■■□□ 2.71
GBX1-201ENST00000297537 NBPF4Q96M43 638 aa31.95■■■□□ 2.71
GBX1-201ENST00000297537 IL2RBP14784 551 aa31.94■■■□□ 2.7
GBX1-201ENST00000297537 LRRC37A3O60309 1634 aa31.93■■■□□ 2.7
GBX1-201ENST00000297537 SMG6Q86US8 1419 aaKnown RBP31.93■■■□□ 2.7
GBX1-201ENST00000297537 CC2D1BQ5T0F9 858 aaKnown RBP31.92■■■□□ 2.7
GBX1-201ENST00000297537 FAM196AQ6ZSG2 479 aa31.92■■■□□ 2.7
GBX1-201ENST00000297537 EXOC5O00471 708 aa31.91■■■□□ 2.7
GBX1-201ENST00000297537 RGPD2P0DJD1 1756 aa31.9■■■□□ 2.7
GBX1-201ENST00000297537 MARCH10Q8NA82 808 aaPredicted RBP31.88■■■□□ 2.69
GBX1-201ENST00000297537 TNS2Q63HR2 1409 aa31.86■■■□□ 2.69
GBX1-201ENST00000297537 EIF4A2Q14240 407 aaKnown RBP31.84■■■□□ 2.69
GBX1-201ENST00000297537 USHBP1Q8N6Y0 703 aa31.84■■■□□ 2.69
GBX1-201ENST00000297537 NCAPD2Q15021 1401 aa31.83■■■□□ 2.69
GBX1-201ENST00000297537 OVOS2A0A0G2JMS6 1433 aa31.83■■■□□ 2.69
GBX1-201ENST00000297537 BCL9O00512 1426 aa31.83■■■□□ 2.69
GBX1-201ENST00000297537 EYA1Q99502 592 aa31.82■■■□□ 2.68
GBX1-201ENST00000297537 MEGF6O75095 1541 aa31.8■■■□□ 2.68
GBX1-201ENST00000297537 MTHFSP49914 203 aa31.79■■■□□ 2.68
GBX1-201ENST00000297537 TRIM37O94972 964 aa31.78■■■□□ 2.68
GBX1-201ENST00000297537 SF3B2Q13435 895 aaKnown RBP31.78■■■□□ 2.68
GBX1-201ENST00000297537 CNGB1Q14028 1251 aaPredicted RBP31.76■■■□□ 2.67
GBX1-201ENST00000297537 RAPGEF4Q8WZA2 1011 aa31.76■■■□□ 2.67
GBX1-201ENST00000297537 DEFB132Q7Z7B7 95 aa31.75■■■□□ 2.67
GBX1-201ENST00000297537 ZCRB1Q8TBF4 217 aaKnown RBP31.74■■■□□ 2.67
GBX1-201ENST00000297537 RGPD1P0DJD0 1748 aa31.74■■■□□ 2.67
GBX1-201ENST00000297537 IGSF1Q8N6C5 1336 aa31.74■■■□□ 2.67
GBX1-201ENST00000297537 TATP17735 454 aaPredicted RBP31.73■■■□□ 2.67
GBX1-201ENST00000297537 IL13P35225 146 aa31.72■■■□□ 2.67
GBX1-201ENST00000297537 TNS1Q9HBL0 1735 aaKnown RBP31.72■■■□□ 2.67
GBX1-201ENST00000297537 DDX10Q13206 875 aaKnown RBP31.71■■■□□ 2.67
GBX1-201ENST00000297537 BAG6P46379 1132 aa31.7■■■□□ 2.67
GBX1-201ENST00000297537 SBF2Q86WG5 1849 aa31.7■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms