RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 MARCH10Q8NA82 808 aaPredicted RBP23.19■■□□□ 1.3
UBXN1-201ENST00000294119 TRAK1Q9UPV9 953 aa23.18■■□□□ 1.3
UBXN1-201ENST00000294119 COL24A1Q17RW2 1714 aa23.18■■□□□ 1.3
UBXN1-201ENST00000294119 NUDT16Q96DE0 195 aaKnown RBP23.17■■□□□ 1.3
UBXN1-201ENST00000294119 AKAP12Q02952 1782 aa23.17■■□□□ 1.3
UBXN1-201ENST00000294119 GPR162Q16538 588 aa23.16■■□□□ 1.3
UBXN1-201ENST00000294119 PPARGC1BQ86YN6 1023 aaKnown RBP23.15■■□□□ 1.3
UBXN1-201ENST00000294119 GCP02774 474 aa23.13■■□□□ 1.29
UBXN1-201ENST00000294119 MPHOSPH9Q99550 1183 aa23.13■■□□□ 1.29
UBXN1-201ENST00000294119 ACEP12821 1306 aa23.12■■□□□ 1.29
UBXN1-201ENST00000294119 COL18A1P39060 1754 aa23.12■■□□□ 1.29
UBXN1-201ENST00000294119 ABTB2Q8N961 1025 aa23.11■■□□□ 1.29
UBXN1-201ENST00000294119 PLEKHG3A1L390 1219 aa23.1■■□□□ 1.29
UBXN1-201ENST00000294119 ARHGEF28Q8N1W1 1705 aaKnown RBP23.1■■□□□ 1.29
UBXN1-201ENST00000294119 HSPA6P17066 643 aa23.08■■□□□ 1.29
UBXN1-201ENST00000294119 CDCA7Q9BWT1 371 aaPredicted RBP23.08■■□□□ 1.29
UBXN1-201ENST00000294119 NHSQ6T4R5 1651 aa23.08■■□□□ 1.29
UBXN1-201ENST00000294119 QSER1Q2KHR3 1735 aa23.07■■□□□ 1.28
UBXN1-201ENST00000294119 SLIT3O75094 1523 aa23.07■■□□□ 1.28
UBXN1-201ENST00000294119 NLRP13Q86W25 1043 aa23.06■■□□□ 1.28
UBXN1-201ENST00000294119 CCDC61Q9Y6R9 512 aa23.05■■□□□ 1.28
UBXN1-201ENST00000294119 ATP10DQ9P241 1426 aa23.04■■□□□ 1.28
UBXN1-201ENST00000294119 WDR17Q8IZU2 1322 aa23.04■■□□□ 1.28
UBXN1-201ENST00000294119 ZNF827Q17R98 1081 aa23.03■■□□□ 1.28
UBXN1-201ENST00000294119 TOM1L2Q6ZVM7 507 aa23.03■■□□□ 1.28
UBXN1-201ENST00000294119 CDK19Q9BWU1 502 aa23.02■■□□□ 1.28
UBXN1-201ENST00000294119 YBX3P16989 372 aaKnown RBP eCLIP23.01■■□□□ 1.27
UBXN1-201ENST00000294119 NLGN2Q8NFZ4 835 aa23.01■■□□□ 1.27
UBXN1-201ENST00000294119 SLC16A10Q8TF71 515 aa23.01■■□□□ 1.27
UBXN1-201ENST00000294119 ADCY9O60503 1353 aa23.01■■□□□ 1.27
UBXN1-201ENST00000294119 AXIN2Q9Y2T1 843 aa23■■□□□ 1.27
UBXN1-201ENST00000294119 BRD4O60885 1362 aaPredicted RBP23■■□□□ 1.27
UBXN1-201ENST00000294119 TNS2Q63HR2 1409 aa22.99■■□□□ 1.27
UBXN1-201ENST00000294119 GRIN3BO60391 1043 aa22.98■■□□□ 1.27
UBXN1-201ENST00000294119 TRPM1Q7Z4N2 1603 aa22.97■■□□□ 1.27
UBXN1-201ENST00000294119 AKT1S1Q96B36 256 aa22.97■■□□□ 1.27
UBXN1-201ENST00000294119 CARD10Q9BWT7 1032 aa22.97■■□□□ 1.27
UBXN1-201ENST00000294119 LRRC4BQ9NT99 713 aa22.97■■□□□ 1.27
UBXN1-201ENST00000294119 BTAF1O14981 1849 aa22.96■■□□□ 1.27
UBXN1-201ENST00000294119 PELP1Q8IZL8 1130 aaKnown RBP22.96■■□□□ 1.27
UBXN1-201ENST00000294119 ABCC6O95255 1503 aa22.95■■□□□ 1.26
UBXN1-201ENST00000294119 EXOC5O00471 708 aa22.94■■□□□ 1.26
UBXN1-201ENST00000294119 POLD1P28340 1107 aa22.94■■□□□ 1.26
UBXN1-201ENST00000294119 TRIM26Q12899 539 aaPredicted RBP22.94■■□□□ 1.26
UBXN1-201ENST00000294119 CPSF1Q10570 1443 aaKnown RBP22.93■■□□□ 1.26
UBXN1-201ENST00000294119 GPBP1L1Q9HC44 474 aaPredicted RBP22.93■■□□□ 1.26
UBXN1-201ENST00000294119 TUBGCP6Q96RT7 1819 aa22.93■■□□□ 1.26
UBXN1-201ENST00000294119 RGPD5Q99666 1765 aa22.93■■□□□ 1.26
UBXN1-201ENST00000294119 PNPLA7Q6ZV29 1317 aa22.92■■□□□ 1.26
UBXN1-201ENST00000294119 USP6P35125 1406 aa22.91■■□□□ 1.26
UBXN1-201ENST00000294119 PIK3C2AO00443 1686 aa22.91■■□□□ 1.26
UBXN1-201ENST00000294119 KLHL34Q8N239 644 aa22.91■■□□□ 1.26
UBXN1-201ENST00000294119 ARHGEF25Q86VW2 580 aa22.9■■□□□ 1.26
UBXN1-201ENST00000294119 PPIP5K1Q6PFW1 1433 aa22.9■■□□□ 1.26
UBXN1-201ENST00000294119 CCDC7Q96M83 1385 aa22.89■■□□□ 1.25
UBXN1-201ENST00000294119 ZBTB7CA1YPR0 619 aa22.88■■□□□ 1.25
UBXN1-201ENST00000294119 NLRP6P59044 892 aa22.88■■□□□ 1.25
UBXN1-201ENST00000294119 DNAJC5GQ8N7S2 189 aa22.87■■□□□ 1.25
UBXN1-201ENST00000294119 ACSBG1Q96GR2 724 aa22.87■■□□□ 1.25
UBXN1-201ENST00000294119 STAC3Q96MF2 364 aa22.87■■□□□ 1.25
UBXN1-201ENST00000294119 PCNTO95613 3336 aa22.85■■□□□ 1.25
UBXN1-201ENST00000294119 SLC27A3Q5K4L6 730 aa22.84■■□□□ 1.25
UBXN1-201ENST00000294119 KIF3CO14782 793 aa22.83■■□□□ 1.25
UBXN1-201ENST00000294119 DCAF11Q8TEB1 546 aa22.82■■□□□ 1.24
UBXN1-201ENST00000294119 KDM2AQ9Y2K7 1162 aa22.81■■□□□ 1.24
UBXN1-201ENST00000294119 NFAT5O94916 1531 aa22.81■■□□□ 1.24
UBXN1-201ENST00000294119 APLP1P51693 650 aa22.8■■□□□ 1.24
UBXN1-201ENST00000294119 QRICH2Q9H0J4 1663 aa22.79■■□□□ 1.24
UBXN1-201ENST00000294119 CSB-PGBD3P0DP91 1061 aa22.78■■□□□ 1.24
UBXN1-201ENST00000294119 ZNF526Q8TF50 670 aaPredicted RBP22.77■■□□□ 1.24
UBXN1-201ENST00000294119 LY75O60449 1722 aa22.77■■□□□ 1.23
UBXN1-201ENST00000294119 KCNH5Q8NCM2 988 aa22.76■■□□□ 1.23
UBXN1-201ENST00000294119 TFCP2L1Q9NZI6 479 aa22.76■■□□□ 1.23
UBXN1-201ENST00000294119 COL13A1Q5TAT6 717 aaPredicted RBP22.75■■□□□ 1.23
UBXN1-201ENST00000294119 KIAA1210Q9ULL0 1709 aa22.74■■□□□ 1.23
UBXN1-201ENST00000294119 CD2APQ9Y5K6 639 aa22.74■■□□□ 1.23
UBXN1-201ENST00000294119 SRPK2P78362 688 aaKnown RBP22.73■■□□□ 1.23
UBXN1-201ENST00000294119 CABP2Q9NPB3 220 aa22.73■■□□□ 1.23
UBXN1-201ENST00000294119 CABP1Q9NZU7 370 aa22.73■■□□□ 1.23
UBXN1-201ENST00000294119 KAT6BQ8WYB5 2073 aa22.73■■□□□ 1.23
UBXN1-201ENST00000294119 IL2RBP14784 551 aa22.71■■□□□ 1.23
UBXN1-201ENST00000294119 ERBB3P21860 1342 aa22.71■■□□□ 1.23
UBXN1-201ENST00000294119 PRELPP51888 382 aa22.7■■□□□ 1.22
UBXN1-201ENST00000294119 COL23A1Q86Y22 540 aaPredicted RBP22.7■■□□□ 1.22
UBXN1-201ENST00000294119 CICQ96RK0 1608 aaPredicted RBP22.69■■□□□ 1.22
UBXN1-201ENST00000294119 NSD2O96028 1365 aa22.69■■□□□ 1.22
UBXN1-201ENST00000294119 KCNQ4P56696 695 aa22.69■■□□□ 1.22
UBXN1-201ENST00000294119 WDR90Q96KV7 1748 aa22.68■■□□□ 1.22
UBXN1-201ENST00000294119 TTC21BQ7Z4L5 1316 aa22.68■■□□□ 1.22
UBXN1-201ENST00000294119 JMYQ8N9B5 988 aa22.68■■□□□ 1.22
UBXN1-201ENST00000294119 TOMM70O94826 608 aa22.65■■□□□ 1.22
UBXN1-201ENST00000294119 USP54Q70EL1 1684 aa22.65■■□□□ 1.22
UBXN1-201ENST00000294119 TTC21AQ8NDW8 1320 aa22.64■■□□□ 1.22
UBXN1-201ENST00000294119 PCGF6Q9BYE7 350 aa22.64■■□□□ 1.21
UBXN1-201ENST00000294119 ANKRD36BQ8N2N9 1353 aa22.63■■□□□ 1.21
UBXN1-201ENST00000294119 CENPJQ9HC77 1338 aaPredicted RBP22.63■■□□□ 1.21
UBXN1-201ENST00000294119 SOX12O15370 315 aa22.63■■□□□ 1.21
UBXN1-201ENST00000294119 CAPN15O75808 1086 aa22.62■■□□□ 1.21
UBXN1-201ENST00000294119 MSL1Q68DK7 614 aa22.62■■□□□ 1.21
UBXN1-201ENST00000294119 NLRP2Q9NX02 1062 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms