RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 ARHGEF25Q86VW2 580 aa23.87■■□□□ 1.41
CCDC78-201ENST00000293889 CFAP53Q96M91 514 aa23.87■■□□□ 1.41
CCDC78-201ENST00000293889 AFF2P51816 1311 aa23.87■■□□□ 1.41
CCDC78-201ENST00000293889 PEAK1Q9H792 1746 aa23.86■■□□□ 1.41
CCDC78-201ENST00000293889 LTN1O94822 1766 aa23.86■■□□□ 1.41
CCDC78-201ENST00000293889 NWD2Q9ULI1 1742 aa23.86■■□□□ 1.41
CCDC78-201ENST00000293889 CPDO75976 1380 aa23.86■■□□□ 1.41
CCDC78-201ENST00000293889 CDK12Q9NYV4 1490 aaPredicted RBP23.85■■□□□ 1.41
CCDC78-201ENST00000293889 AMPHP49418 695 aa23.85■■□□□ 1.41
CCDC78-201ENST00000293889 PHF23Q9BUL5 403 aaPredicted RBP23.85■■□□□ 1.41
CCDC78-201ENST00000293889 SLIT2O94813 1529 aa23.85■■□□□ 1.41
CCDC78-201ENST00000293889 INSRP06213 1382 aa23.85■■□□□ 1.41
CCDC78-201ENST00000293889 ZBTB7CA1YPR0 619 aa23.84■■□□□ 1.41
CCDC78-201ENST00000293889 FNBP4Q8N3X1 1017 aaPredicted RBP23.84■■□□□ 1.41
CCDC78-201ENST00000293889 PRDM11Q9NQV5 511 aa23.84■■□□□ 1.41
CCDC78-201ENST00000293889 COL18A1P39060 1754 aa23.84■■□□□ 1.41
CCDC78-201ENST00000293889 CHRNA2Q15822 529 aa23.84■■□□□ 1.41
CCDC78-201ENST00000293889 LMO7Q8WWI1 1683 aa23.84■■□□□ 1.41
CCDC78-201ENST00000293889 NRAPQ86VF7 1730 aa23.84■■□□□ 1.41
CCDC78-201ENST00000293889 COL3A1P02461 1466 aaPredicted RBP23.83■■□□□ 1.41
CCDC78-201ENST00000293889 PNISRQ8TF01 805 aaKnown RBP23.83■■□□□ 1.41
CCDC78-201ENST00000293889 FLT4P35916 1363 aa23.83■■□□□ 1.4
CCDC78-201ENST00000293889 KIF24Q5T7B8 1368 aa23.83■■□□□ 1.4
CCDC78-201ENST00000293889 BCL9LQ86UU0 1499 aa23.83■■□□□ 1.4
CCDC78-201ENST00000293889 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.82■■□□□ 1.4
CCDC78-201ENST00000293889 RGPD5Q99666 1765 aa23.82■■□□□ 1.4
CCDC78-201ENST00000293889 HOXC9P31274 260 aa23.82■■□□□ 1.4
CCDC78-201ENST00000293889 HSP90AB2PQ58FF8 381 aa23.82■■□□□ 1.4
CCDC78-201ENST00000293889 IP6K1Q92551 441 aa23.81■■□□□ 1.4
CCDC78-201ENST00000293889 RTL1A6NKG5 1358 aa23.81■■□□□ 1.4
CCDC78-201ENST00000293889 CAMTA1Q9Y6Y1 1673 aa23.79■■□□□ 1.4
CCDC78-201ENST00000293889 DIAPH1O60610 1272 aaKnown RBP23.79■■□□□ 1.4
CCDC78-201ENST00000293889 USP21Q9UK80 565 aa23.79■■□□□ 1.4
CCDC78-201ENST00000293889 BTG4Q9NY30 223 aa23.78■■□□□ 1.4
CCDC78-201ENST00000293889 FAM9BQ8IZU0 186 aa23.77■■□□□ 1.4
CCDC78-201ENST00000293889 ZNF772Q68DY9 489 aaPredicted RBP23.77■■□□□ 1.4
CCDC78-201ENST00000293889 IL13P35225 146 aa23.76■■□□□ 1.39
CCDC78-201ENST00000293889 EIF4A2Q14240 407 aaKnown RBP23.76■■□□□ 1.39
CCDC78-201ENST00000293889 POTEAQ6S8J7 498 aa23.76■■□□□ 1.39
CCDC78-201ENST00000293889 AXIN2Q9Y2T1 843 aa23.76■■□□□ 1.39
CCDC78-201ENST00000293889 WDR43Q15061 677 aaKnown RBP eCLIP23.75■■□□□ 1.39
CCDC78-201ENST00000293889 UNC5CLQ8IV45 518 aa23.75■■□□□ 1.39
CCDC78-201ENST00000293889 YTHDC1Q96MU7 727 aaKnown RBP23.75■■□□□ 1.39
CCDC78-201ENST00000293889 NUDCQ9Y266 331 aa23.74■■□□□ 1.39
CCDC78-201ENST00000293889 ABCC6O95255 1503 aa23.73■■□□□ 1.39
CCDC78-201ENST00000293889 ATRNO75882 1429 aa23.73■■□□□ 1.39
CCDC78-201ENST00000293889 BLMP54132 1417 aaPredicted RBP23.73■■□□□ 1.39
CCDC78-201ENST00000293889 ADAMTS8Q9UP79 889 aa23.73■■□□□ 1.39
CCDC78-201ENST00000293889 U2SURPO15042 1029 aaKnown RBP23.72■■□□□ 1.39
CCDC78-201ENST00000293889 LTV1Q96GA3 475 aaPredicted RBP23.72■■□□□ 1.39
CCDC78-201ENST00000293889 QTRT2Q9H974 415 aaKnown RBP23.72■■□□□ 1.39
CCDC78-201ENST00000293889 COL5A2P05997 1499 aaPredicted RBP23.71■■□□□ 1.39
CCDC78-201ENST00000293889 U2AF1L5P0DN76 240 aaPredicted RBP23.7■■□□□ 1.38
CCDC78-201ENST00000293889 U2AF1Q01081 240 aaKnown RBP eCLIP23.7■■□□□ 1.38
CCDC78-201ENST00000293889 TRPC5Q9UL62 973 aaPredicted RBP23.7■■□□□ 1.38
CCDC78-201ENST00000293889 ANKRD24Q8TF21 1146 aa23.69■■□□□ 1.38
CCDC78-201ENST00000293889 STRN4Q9NRL3 753 aa23.68■■□□□ 1.38
CCDC78-201ENST00000293889 GLI3P10071 1580 aa23.68■■□□□ 1.38
CCDC78-201ENST00000293889 VPS72Q15906 364 aa23.67■■□□□ 1.38
CCDC78-201ENST00000293889 ERBB3P21860 1342 aa23.66■■□□□ 1.38
CCDC78-201ENST00000293889 EYA1Q99502 592 aa23.66■■□□□ 1.38
CCDC78-201ENST00000293889 EVA1CP58658 441 aa23.65■■□□□ 1.38
CCDC78-201ENST00000293889 LARP1Q6PKG0 1096 aaKnown RBP23.65■■□□□ 1.38
CCDC78-201ENST00000293889 RGPD1P0DJD0 1748 aa23.64■■□□□ 1.38
CCDC78-201ENST00000293889 GJD4Q96KN9 370 aaPredicted RBP23.63■■□□□ 1.37
CCDC78-201ENST00000293889 IGSF1Q8N6C5 1336 aa23.63■■□□□ 1.37
CCDC78-201ENST00000293889 RGPD2P0DJD1 1756 aa23.63■■□□□ 1.37
CCDC78-201ENST00000293889 HMOX1P09601 288 aa23.62■■□□□ 1.37
CCDC78-201ENST00000293889 NBPF6Q5VWK0 638 aa23.62■■□□□ 1.37
CCDC78-201ENST00000293889 NBPF4Q96M43 638 aa23.62■■□□□ 1.37
CCDC78-201ENST00000293889 RXRBP28702 533 aa23.62■■□□□ 1.37
CCDC78-201ENST00000293889 RBM6P78332 1123 aaKnown RBP23.62■■□□□ 1.37
CCDC78-201ENST00000293889 AEBP1Q8IUX7 1158 aa23.62■■□□□ 1.37
CCDC78-201ENST00000293889 CCDC9Q9Y3X0 531 aaKnown RBP23.62■■□□□ 1.37
CCDC78-201ENST00000293889 SPATA31A5Q5VU36 1347 aa23.62■■□□□ 1.37
CCDC78-201ENST00000293889 SPATA31A7Q8IWB4 1347 aa23.62■■□□□ 1.37
CCDC78-201ENST00000293889 CSB-PGBD3P0DP91 1061 aa23.61■■□□□ 1.37
CCDC78-201ENST00000293889 SULT6B1Q6IMI4 303 aa23.61■■□□□ 1.37
CCDC78-201ENST00000293889 CCDC146Q8IYE0 955 aa23.61■■□□□ 1.37
CCDC78-201ENST00000293889 WDR17Q8IZU2 1322 aa23.61■■□□□ 1.37
CCDC78-201ENST00000293889 CRB1P82279 1406 aa23.6■■□□□ 1.37
CCDC78-201ENST00000293889 FCHSD2O94868 740 aa23.6■■□□□ 1.37
CCDC78-201ENST00000293889 RSPH6AQ9H0K4 717 aa23.6■■□□□ 1.37
CCDC78-201ENST00000293889 FAM208AQ9UK61 1670 aaKnown RBP23.6■■□□□ 1.37
CCDC78-201ENST00000293889 SPATA31A1Q5TZJ5 1347 aa23.59■■□□□ 1.37
CCDC78-201ENST00000293889 USHBP1Q8N6Y0 703 aa23.59■■□□□ 1.37
CCDC78-201ENST00000293889 NLRP2Q9NX02 1062 aa23.59■■□□□ 1.37
CCDC78-201ENST00000293889 KDRP35968 1356 aa23.57■■□□□ 1.36
CCDC78-201ENST00000293889 PRKAR2BP31323 418 aa23.57■■□□□ 1.36
CCDC78-201ENST00000293889 ILDR2Q71H61 639 aa23.57■■□□□ 1.36
CCDC78-201ENST00000293889 PLEKHF1Q96S99 279 aa23.57■■□□□ 1.36
CCDC78-201ENST00000293889 USP35Q9P2H5 1018 aa23.57■■□□□ 1.36
CCDC78-201ENST00000293889 WNK3Q9BYP7 1800 aa23.57■■□□□ 1.36
CCDC78-201ENST00000293889 TOM1L2Q6ZVM7 507 aa23.56■■□□□ 1.36
CCDC78-201ENST00000293889 RUNDC1Q96C34 613 aa23.56■■□□□ 1.36
CCDC78-201ENST00000293889 PNNQ9H307 717 aaKnown RBP23.55■■□□□ 1.36
CCDC78-201ENST00000293889 RGS12O14924 1447 aa23.55■■□□□ 1.36
CCDC78-201ENST00000293889 NCAPD2Q15021 1401 aa23.55■■□□□ 1.36
CCDC78-201ENST00000293889 BRWD3Q6RI45 1802 aa23.54■■□□□ 1.36
CCDC78-201ENST00000293889 SENP3-EIF4A1A0A087X0R7 540 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms