RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 CCDC150Q8NCX0 1101 aa5.2□□□□□ -1.58
NCOA1-201ENST00000288599 PUS7Q96PZ0 661 aaKnown RBP5.2□□□□□ -1.58
NCOA1-201ENST00000288599 ZNF652Q9Y2D9 606 aa5.2□□□□□ -1.58
NCOA1-201ENST00000288599 EPRSP07814 1512 aaKnown RBP5.19□□□□□ -1.58
NCOA1-201ENST00000288599 CCDC172P0C7W6 258 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 NOD1Q9Y239 953 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 FMN1Q68DA7 1419 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 H0YHG0 523 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 IPO8O15397 1037 aaKnown RBP5.19□□□□□ -1.58
NCOA1-201ENST00000288599 SLFN14P0C7P3 912 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 SYAP1Q96A49 352 aaPredicted RBP5.19□□□□□ -1.58
NCOA1-201ENST00000288599 FERMT1Q9BQL6 677 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 ERCC6Q03468 1493 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 CCDC18Q5T9S5 1454 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 EHBP1L1Q8N3D4 1523 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 KIF4AO95239 1232 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 CCDC181Q5TID7 509 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 PALM3A6NDB9 673 aaPredicted RBP5.19□□□□□ -1.58
NCOA1-201ENST00000288599 FAM184AQ8NB25 1140 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 SIN3AQ96ST3 1273 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 MAP10Q9P2G4 905 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 TRIM6-TRIM34B2RNG4 842 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 TCHPQ9BT92 498 aa5.19□□□□□ -1.58
NCOA1-201ENST00000288599 ERLIN2O94905 339 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 XBP1P17861 261 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 ZNF569Q5MCW4 686 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 CFAP70Q5T0N1 1121 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 SPC25Q9HBM1 224 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 HDAC9Q9UKV0 1011 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 ZNF76P36508 570 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 APOBRQ0VD83 1088 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 TTLL5Q6EMB2 1281 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 AEBP1Q8IUX7 1158 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 NCAPGQ9BPX3 1015 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 NUCB2P80303 420 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 SAFBQ15424 915 aaKnown RBP eCLIP5.18□□□□□ -1.58
NCOA1-201ENST00000288599 CCDC129Q6ZRS4 1044 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 STK26Q9P289 416 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 NGEFQ8N5V2 710 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 PZPP20742 1482 aa5.18□□□□□ -1.58
NCOA1-201ENST00000288599 ARL1P40616 181 aaPredicted RBP5.17□□□□□ -1.58
NCOA1-201ENST00000288599 ENOX2Q16206 610 aaKnown RBP5.17□□□□□ -1.58
NCOA1-201ENST00000288599 ELMSAN1Q6PJG2 1045 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 CCDC91Q7Z6B0 441 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 CAGE1Q8TC20 777 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 CEP63Q96MT8 703 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 GNL3LQ9NVN8 582 aaKnown RBP5.17□□□□□ -1.58
NCOA1-201ENST00000288599 ADCY10Q96PN6 1610 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 POLR1AO95602 1720 aaPredicted RBP5.17□□□□□ -1.58
NCOA1-201ENST00000288599 CCER2I3L3R5 266 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 SEC24BO95487 1268 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 CETN2P41208 172 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 SERTAD1Q9UHV2 236 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 IQGAP2Q13576 1575 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 KIAA0556O60303 1618 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 DNMT1P26358 1616 aaKnown RBP5.17□□□□□ -1.58
NCOA1-201ENST00000288599 SYCE3A1L190 88 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 FOSBP53539 338 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 SAFB2Q14151 953 aaKnown RBP eCLIP5.17□□□□□ -1.58
NCOA1-201ENST00000288599 NOM1Q5C9Z4 860 aaKnown RBP5.17□□□□□ -1.58
NCOA1-201ENST00000288599 CDK13Q14004 1512 aaKnown RBP5.17□□□□□ -1.58
NCOA1-201ENST00000288599 KIF16BQ96L93 1317 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 EIF3JO75822 258 aaKnown RBP5.17□□□□□ -1.58
NCOA1-201ENST00000288599 ARID5AQ03989 594 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 PSME1Q06323 249 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 TSNARE1Q96NA8 513 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 TSPYL2Q9H2G4 693 aaPredicted RBP5.17□□□□□ -1.58
NCOA1-201ENST00000288599 MIA2Q96PC5 1412 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 BCORL1Q5H9F3 1711 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 FBXW10Q5XX13 1052 aa5.17□□□□□ -1.58
NCOA1-201ENST00000288599 C11orf95C9JLR9 678 aaPredicted RBP5.16□□□□□ -1.58
NCOA1-201ENST00000288599 CPLX1O14810 134 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 TMEM259Q4ZIN3 620 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 UTP14AQ9BVJ6 771 aaKnown RBP5.16□□□□□ -1.58
NCOA1-201ENST00000288599 NUCKS1Q9H1E3 243 aaKnown RBP5.16□□□□□ -1.58
NCOA1-201ENST00000288599 SUPT6HQ7KZ85 1726 aaKnown RBP5.16□□□□□ -1.58
NCOA1-201ENST00000288599 CEP135Q66GS9 1140 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 RSPH3Q86UC2 560 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 ATP6V1E2Q96A05 226 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 IRAK4Q9NWZ3 460 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 CNOT7Q9UIV1 285 aaKnown RBP5.16□□□□□ -1.58
NCOA1-201ENST00000288599 RPRD2Q5VT52 1461 aaKnown RBP5.16□□□□□ -1.58
NCOA1-201ENST00000288599 GOLGA6L7A0A1B0GV03 622 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 NDC80O14777 642 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 RBM10P98175 930 aaKnown RBP5.16□□□□□ -1.58
NCOA1-201ENST00000288599 NCBP1Q09161 790 aaKnown RBP5.16□□□□□ -1.58
NCOA1-201ENST00000288599 FILIP1Q7Z7B0 1213 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 CLASRPQ8N2M8 674 aaKnown RBP5.16□□□□□ -1.58
NCOA1-201ENST00000288599 IFT57Q9NWB7 429 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 ANKRD30BQ9BXX2 1392 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 PLCB3Q01970 1234 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 HOOK3Q86VS8 718 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 ABCC10Q5T3U5 1492 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 PTPRGP23470 1445 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 MYO1BO43795 1136 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 KDM4AO75164 1064 aa5.16□□□□□ -1.58
NCOA1-201ENST00000288599 IFIT2P09913 472 aaKnown RBP5.16□□□□□ -1.58
NCOA1-201ENST00000288599 SSR1P43307 286 aaKnown RBP5.16□□□□□ -1.58
NCOA1-201ENST00000288599 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.16□□□□□ -1.58
NCOA1-201ENST00000288599 GDPD2Q9HCC8 539 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms