RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 UBAP1LF5GYI3 381 aa17.45■□□□□ 0.38
ACER3-201ENST00000278544 PLEKHF1Q96S99 279 aa17.45■□□□□ 0.38
ACER3-201ENST00000278544 BCL2L13Q9BXK5 485 aa17.45■□□□□ 0.38
ACER3-201ENST00000278544 NUTM2BA6NNL0 878 aaPredicted RBP17.44■□□□□ 0.38
ACER3-201ENST00000278544 NUTM2EB1AL46 878 aaPredicted RBP17.44■□□□□ 0.38
ACER3-201ENST00000278544 ELL2O00472 640 aaPredicted RBP17.44■□□□□ 0.38
ACER3-201ENST00000278544 NUTM2AQ8IVF1 878 aaPredicted RBP17.44■□□□□ 0.38
ACER3-201ENST00000278544 AATKQ6ZMQ8 1374 aa17.44■□□□□ 0.38
ACER3-201ENST00000278544 PNPLA6Q8IY17 1366 aa17.44■□□□□ 0.38
ACER3-201ENST00000278544 FLT4P35916 1363 aa17.43■□□□□ 0.38
ACER3-201ENST00000278544 STRN4Q9NRL3 753 aa17.43■□□□□ 0.38
ACER3-201ENST00000278544 NLRP2Q9NX02 1062 aa17.43■□□□□ 0.38
ACER3-201ENST00000278544 XIRP1Q702N8 1843 aaKnown RBP17.43■□□□□ 0.38
ACER3-201ENST00000278544 SHPRHQ149N8 1683 aa17.43■□□□□ 0.38
ACER3-201ENST00000278544 COL3A1P02461 1466 aaPredicted RBP17.43■□□□□ 0.38
ACER3-201ENST00000278544 USP31Q70CQ4 1352 aa17.43■□□□□ 0.38
ACER3-201ENST00000278544 FCHSD2O94868 740 aa17.43■□□□□ 0.38
ACER3-201ENST00000278544 NBPF6Q5VWK0 638 aa17.43■□□□□ 0.38
ACER3-201ENST00000278544 MCM10Q7L590 875 aa17.43■□□□□ 0.38
ACER3-201ENST00000278544 NBPF4Q96M43 638 aa17.43■□□□□ 0.38
ACER3-201ENST00000278544 NRKQ7Z2Y5 1582 aa17.42■□□□□ 0.38
ACER3-201ENST00000278544 KCNH5Q8NCM2 988 aa17.42■□□□□ 0.38
ACER3-201ENST00000278544 ADAMTS2O95450 1211 aa17.42■□□□□ 0.38
ACER3-201ENST00000278544 PRDM11Q9NQV5 511 aa17.42■□□□□ 0.38
ACER3-201ENST00000278544 TCERG1O14776 1098 aaKnown RBP17.41■□□□□ 0.38
ACER3-201ENST00000278544 MIS18AQ9NYP9 233 aa17.41■□□□□ 0.38
ACER3-201ENST00000278544 SPATA31A3Q5VYP0 1347 aa17.41■□□□□ 0.38
ACER3-201ENST00000278544 SBNO1A3KN83 1393 aa17.41■□□□□ 0.38
ACER3-201ENST00000278544 ANKRD26Q9UPS8 1709 aa17.41■□□□□ 0.38
ACER3-201ENST00000278544 ARHGEF25Q86VW2 580 aa17.41■□□□□ 0.38
ACER3-201ENST00000278544 ANKRD24Q8TF21 1146 aa17.41■□□□□ 0.38
ACER3-201ENST00000278544 RCAN3Q9UKA8 241 aa17.4■□□□□ 0.38
ACER3-201ENST00000278544 TRIM35Q9UPQ4 493 aa17.4■□□□□ 0.38
ACER3-201ENST00000278544 DUSP27Q5VZP5 1158 aa17.39■□□□□ 0.38
ACER3-201ENST00000278544 IP6K1Q92551 441 aa17.39■□□□□ 0.38
ACER3-201ENST00000278544 KIAA0232Q92628 1395 aa17.39■□□□□ 0.37
ACER3-201ENST00000278544 PEAK1Q9H792 1746 aa17.39■□□□□ 0.37
ACER3-201ENST00000278544 CDK12Q9NYV4 1490 aaPredicted RBP17.38■□□□□ 0.37
ACER3-201ENST00000278544 SLFN5Q08AF3 891 aa17.38■□□□□ 0.37
ACER3-201ENST00000278544 MTHFSDQ2M296 383 aaKnown RBP17.37■□□□□ 0.37
ACER3-201ENST00000278544 DCCP43146 1447 aa17.37■□□□□ 0.37
ACER3-201ENST00000278544 BCAR3O75815 825 aa17.36■□□□□ 0.37
ACER3-201ENST00000278544 NFE2L2Q16236 605 aa17.36■□□□□ 0.37
ACER3-201ENST00000278544 ZNF521Q96K83 1311 aa17.35■□□□□ 0.37
ACER3-201ENST00000278544 FRAT1Q92837 279 aaPredicted RBP17.35■□□□□ 0.37
ACER3-201ENST00000278544 SMG6Q86US8 1419 aaKnown RBP17.35■□□□□ 0.37
ACER3-201ENST00000278544 TNS3Q68CZ2 1445 aa17.34■□□□□ 0.37
ACER3-201ENST00000278544 PDE3BQ13370 1112 aa17.34■□□□□ 0.37
ACER3-201ENST00000278544 PNNQ9H307 717 aaKnown RBP17.34■□□□□ 0.37
ACER3-201ENST00000278544 NCOA3Q9Y6Q9 1424 aa17.34■□□□□ 0.37
ACER3-201ENST00000278544 KRT24Q2M2I5 525 aa17.33■□□□□ 0.37
ACER3-201ENST00000278544 SOS2Q07890 1332 aaPredicted RBP17.33■□□□□ 0.36
ACER3-201ENST00000278544 E9PSI1 815 aa17.33■□□□□ 0.36
ACER3-201ENST00000278544 TOM1O60784 492 aa17.33■□□□□ 0.36
ACER3-201ENST00000278544 INSRP06213 1382 aa17.33■□□□□ 0.36
ACER3-201ENST00000278544 EXOSC9Q06265 439 aaKnown RBP17.33■□□□□ 0.36
ACER3-201ENST00000278544 EVA1CP58658 441 aa17.32■□□□□ 0.36
ACER3-201ENST00000278544 TOM1L2Q6ZVM7 507 aa17.31■□□□□ 0.36
ACER3-201ENST00000278544 C20orf194Q5TEA3 1177 aa17.31■□□□□ 0.36
ACER3-201ENST00000278544 PXDNQ92626 1479 aa17.31■□□□□ 0.36
ACER3-201ENST00000278544 USP19O94966 1318 aa17.31■□□□□ 0.36
ACER3-201ENST00000278544 RTF1Q92541 710 aaKnown RBP17.3■□□□□ 0.36
ACER3-201ENST00000278544 CANXP27824 592 aaKnown RBP17.3■□□□□ 0.36
ACER3-201ENST00000278544 MPRIPQ6WCQ1 1025 aa17.3■□□□□ 0.36
ACER3-201ENST00000278544 IGSF1Q8N6C5 1336 aa17.29■□□□□ 0.36
ACER3-201ENST00000278544 MED1Q15648 1581 aaPredicted RBP17.29■□□□□ 0.36
ACER3-201ENST00000278544 NECTIN2Q92692 538 aa17.29■□□□□ 0.36
ACER3-201ENST00000278544 CLUAP1Q96AJ1 413 aa17.29■□□□□ 0.36
ACER3-201ENST00000278544 FANCIQ9NVI1 1328 aa17.29■□□□□ 0.36
ACER3-201ENST00000278544 B4GALNT3Q6L9W6 998 aa17.29■□□□□ 0.36
ACER3-201ENST00000278544 BTG4Q9NY30 223 aa17.29■□□□□ 0.36
ACER3-201ENST00000278544 A0A0G2JS52 829 aa17.28■□□□□ 0.36
ACER3-201ENST00000278544 ERBB3P21860 1342 aa17.28■□□□□ 0.36
ACER3-201ENST00000278544 TNNQ9UQP3 1299 aa17.27■□□□□ 0.36
ACER3-201ENST00000278544 MARF1Q9Y4F3 1742 aaKnown RBP17.27■□□□□ 0.36
ACER3-201ENST00000278544 LTN1O94822 1766 aa17.27■□□□□ 0.36
ACER3-201ENST00000278544 ZNF530Q6P9A1 599 aaPredicted RBP17.27■□□□□ 0.36
ACER3-201ENST00000278544 LARP1Q6PKG0 1096 aaKnown RBP17.27■□□□□ 0.36
ACER3-201ENST00000278544 NFAT5O94916 1531 aa17.27■□□□□ 0.36
ACER3-201ENST00000278544 ARHGEF10O15013 1369 aa17.27■□□□□ 0.36
ACER3-201ENST00000278544 LTBP4Q8N2S1 1624 aa17.27■□□□□ 0.36
ACER3-201ENST00000278544 TSPYL6Q8N831 410 aa17.27■□□□□ 0.35
ACER3-201ENST00000278544 LGR6Q9HBX8 967 aa17.27■□□□□ 0.35
ACER3-201ENST00000278544 CCDC9Q9Y3X0 531 aaKnown RBP17.27■□□□□ 0.35
ACER3-201ENST00000278544 RRP1P56182 461 aaKnown RBP17.26■□□□□ 0.35
ACER3-201ENST00000278544 IQSEC2Q5JU85 1478 aa17.26■□□□□ 0.35
ACER3-201ENST00000278544 KIF1AQ12756 1690 aa17.26■□□□□ 0.35
ACER3-201ENST00000278544 WDR63Q8IWG1 891 aa17.26■□□□□ 0.35
ACER3-201ENST00000278544 RAPGEF4Q8WZA2 1011 aa17.26■□□□□ 0.35
ACER3-201ENST00000278544 MYH16Q9H6N6 1097 aa17.26■□□□□ 0.35
ACER3-201ENST00000278544 EXOC6Q8TAG9 804 aa17.25■□□□□ 0.35
ACER3-201ENST00000278544 TRPM3Q9HCF6 1732 aaPredicted RBP17.25■□□□□ 0.35
ACER3-201ENST00000278544 KAT6BQ8WYB5 2073 aa17.25■□□□□ 0.35
ACER3-201ENST00000278544 MBIPQ9NS73 344 aa17.25■□□□□ 0.35
ACER3-201ENST00000278544 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
ACER3-201ENST00000278544 DDX54Q8TDD1 881 aaKnown RBP17.24■□□□□ 0.35
ACER3-201ENST00000278544 ROBO1Q9Y6N7 1651 aa17.23■□□□□ 0.35
ACER3-201ENST00000278544 CERKQ8TCT0 537 aa17.22■□□□□ 0.35
ACER3-201ENST00000278544 RGPD2P0DJD1 1756 aa17.22■□□□□ 0.35
ACER3-201ENST00000278544 RGPD5Q99666 1765 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms