RNA–Protein interactions for RNA: ENST00000274787.2

HIGD2A-201, Transcript of HIG1 hypoxia inducible domain family member 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD2A, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD2A-201ENST00000274787 CRB1P82279 1406 aa18.39■□□□□ 0.53
HIGD2A-201ENST00000274787 BRWD3Q6RI45 1802 aa18.38■□□□□ 0.53
HIGD2A-201ENST00000274787 EVA1CP58658 441 aa18.38■□□□□ 0.53
HIGD2A-201ENST00000274787 POLR3GLQ9BT43 218 aa18.38■□□□□ 0.53
HIGD2A-201ENST00000274787 CCDC9Q9Y3X0 531 aaKnown RBP18.38■□□□□ 0.53
HIGD2A-201ENST00000274787 BLMP54132 1417 aaPredicted RBP18.38■□□□□ 0.53
HIGD2A-201ENST00000274787 PANK3Q9H999 370 aa18.37■□□□□ 0.53
HIGD2A-201ENST00000274787 STRN4Q9NRL3 753 aa18.37■□□□□ 0.53
HIGD2A-201ENST00000274787 AXIN2Q9Y2T1 843 aa18.37■□□□□ 0.53
HIGD2A-201ENST00000274787 THRAP3Q9Y2W1 955 aaKnown RBP18.37■□□□□ 0.53
HIGD2A-201ENST00000274787 NSD2O96028 1365 aa18.37■□□□□ 0.53
HIGD2A-201ENST00000274787 CCDC7Q96M83 1385 aa18.37■□□□□ 0.53
HIGD2A-201ENST00000274787 FAM208AQ9UK61 1670 aaKnown RBP18.37■□□□□ 0.53
HIGD2A-201ENST00000274787 RTL1A6NKG5 1358 aa18.36■□□□□ 0.53
HIGD2A-201ENST00000274787 SOX12O15370 315 aa18.36■□□□□ 0.53
HIGD2A-201ENST00000274787 KIF24Q5T7B8 1368 aa18.36■□□□□ 0.53
HIGD2A-201ENST00000274787 BARGINQ6ZT62 677 aa18.36■□□□□ 0.53
HIGD2A-201ENST00000274787 WDR17Q8IZU2 1322 aa18.36■□□□□ 0.53
HIGD2A-201ENST00000274787 GGNBP2Q9H3C7 697 aa18.36■□□□□ 0.53
HIGD2A-201ENST00000274787 WNK3Q9BYP7 1800 aa18.35■□□□□ 0.53
HIGD2A-201ENST00000274787 LARP1Q6PKG0 1096 aaKnown RBP18.35■□□□□ 0.53
HIGD2A-201ENST00000274787 WASHC2AQ641Q2 1341 aa18.34■□□□□ 0.53
HIGD2A-201ENST00000274787 SEPT12Q8IYM1 358 aa18.34■□□□□ 0.53
HIGD2A-201ENST00000274787 PARP4Q9UKK3 1724 aaKnown RBP18.34■□□□□ 0.53
HIGD2A-201ENST00000274787 ERBB3P21860 1342 aa18.33■□□□□ 0.53
HIGD2A-201ENST00000274787 TCP11L2Q8N4U5 519 aa18.33■□□□□ 0.52
HIGD2A-201ENST00000274787 IP6K1Q92551 441 aa18.33■□□□□ 0.52
HIGD2A-201ENST00000274787 MAP3K19Q56UN5 1328 aa18.32■□□□□ 0.52
HIGD2A-201ENST00000274787 ZBTB7CA1YPR0 619 aa18.32■□□□□ 0.52
HIGD2A-201ENST00000274787 ZEB1P37275 1124 aaPredicted RBP18.32■□□□□ 0.52
HIGD2A-201ENST00000274787 FAM98CQ17RN3 349 aaKnown RBP18.32■□□□□ 0.52
HIGD2A-201ENST00000274787 MAP2P11137 1827 aaKnown RBP18.31■□□□□ 0.52
HIGD2A-201ENST00000274787 CARD10Q9BWT7 1032 aa18.31■□□□□ 0.52
HIGD2A-201ENST00000274787 PEAK1Q9H792 1746 aa18.29■□□□□ 0.52
HIGD2A-201ENST00000274787 TOM1L2Q6ZVM7 507 aa18.29■□□□□ 0.52
HIGD2A-201ENST00000274787 KNSTRNQ9Y448 316 aa18.29■□□□□ 0.52
HIGD2A-201ENST00000274787 PER1O15534 1290 aaPredicted RBP18.28■□□□□ 0.52
HIGD2A-201ENST00000274787 HOXC9P31274 260 aa18.28■□□□□ 0.52
HIGD2A-201ENST00000274787 CDCA7Q9BWT1 371 aaPredicted RBP18.28■□□□□ 0.52
HIGD2A-201ENST00000274787 FLT4P35916 1363 aa18.28■□□□□ 0.52
HIGD2A-201ENST00000274787 KRT27Q7Z3Y8 459 aa18.27■□□□□ 0.52
HIGD2A-201ENST00000274787 EP400Q96L91 3159 aa18.27■□□□□ 0.51
HIGD2A-201ENST00000274787 NPC1L1Q9UHC9 1359 aa18.27■□□□□ 0.51
HIGD2A-201ENST00000274787 DISP2A7MBM2 1401 aa18.26■□□□□ 0.51
HIGD2A-201ENST00000274787 CSB-PGBD3P0DP91 1061 aa18.26■□□□□ 0.51
HIGD2A-201ENST00000274787 AMPHP49418 695 aa18.26■□□□□ 0.51
HIGD2A-201ENST00000274787 AMER1Q5JTC6 1135 aaPredicted RBP18.26■□□□□ 0.51
HIGD2A-201ENST00000274787 ANKRD24Q8TF21 1146 aa18.26■□□□□ 0.51
HIGD2A-201ENST00000274787 UPF1Q92900 1129 aaKnown RBP eCLIP18.26■□□□□ 0.51
HIGD2A-201ENST00000274787 USP35Q9P2H5 1018 aa18.26■□□□□ 0.51
HIGD2A-201ENST00000274787 LRRC37A3O60309 1634 aa18.26■□□□□ 0.51
HIGD2A-201ENST00000274787 INSRP06213 1382 aa18.26■□□□□ 0.51
HIGD2A-201ENST00000274787 SMG6Q86US8 1419 aaKnown RBP18.25■□□□□ 0.51
HIGD2A-201ENST00000274787 FBLN1P23142 703 aa18.25■□□□□ 0.51
HIGD2A-201ENST00000274787 RRS1Q15050 365 aaKnown RBP18.25■□□□□ 0.51
HIGD2A-201ENST00000274787 A0A0G2JS52 829 aa18.23■□□□□ 0.51
HIGD2A-201ENST00000274787 MYT1Q01538 1121 aa18.23■□□□□ 0.51
HIGD2A-201ENST00000274787 CCDC125Q86Z20 511 aa18.23■□□□□ 0.51
HIGD2A-201ENST00000274787 RGPD2P0DJD1 1756 aa18.22■□□□□ 0.51
HIGD2A-201ENST00000274787 POLKQ9UBT6 870 aa18.21■□□□□ 0.51
HIGD2A-201ENST00000274787 MORC1Q86VD1 984 aa18.2■□□□□ 0.5
HIGD2A-201ENST00000274787 NLRP2Q9NX02 1062 aa18.2■□□□□ 0.5
HIGD2A-201ENST00000274787 EMILIN1Q9Y6C2 1016 aa18.2■□□□□ 0.5
HIGD2A-201ENST00000274787 RGPD1P0DJD0 1748 aa18.2■□□□□ 0.5
HIGD2A-201ENST00000274787 BCL9O00512 1426 aa18.19■□□□□ 0.5
HIGD2A-201ENST00000274787 NCAPD2Q15021 1401 aa18.19■□□□□ 0.5
HIGD2A-201ENST00000274787 HSP90AB2PQ58FF8 381 aa18.19■□□□□ 0.5
HIGD2A-201ENST00000274787 TNS2Q63HR2 1409 aa18.18■□□□□ 0.5
HIGD2A-201ENST00000274787 PDE3BQ13370 1112 aa18.18■□□□□ 0.5
HIGD2A-201ENST00000274787 DDB1Q16531 1140 aa18.18■□□□□ 0.5
HIGD2A-201ENST00000274787 FAM196AQ6ZSG2 479 aa18.17■□□□□ 0.5
HIGD2A-201ENST00000274787 IL2RBP14784 551 aa18.16■□□□□ 0.5
HIGD2A-201ENST00000274787 OVOS2A0A0G2JMS6 1433 aa18.15■□□□□ 0.5
HIGD2A-201ENST00000274787 TNS1Q9HBL0 1735 aaKnown RBP18.15■□□□□ 0.5
HIGD2A-201ENST00000274787 SBF2Q86WG5 1849 aa18.15■□□□□ 0.5
HIGD2A-201ENST00000274787 LTV1Q96GA3 475 aaPredicted RBP18.15■□□□□ 0.5
HIGD2A-201ENST00000274787 NBPF6Q5VWK0 638 aa18.14■□□□□ 0.49
HIGD2A-201ENST00000274787 NBPF4Q96M43 638 aa18.14■□□□□ 0.49
HIGD2A-201ENST00000274787 PLEKHG2Q9H7P9 1386 aa18.14■□□□□ 0.49
HIGD2A-201ENST00000274787 EXOC5O00471 708 aa18.13■□□□□ 0.49
HIGD2A-201ENST00000274787 TNNT2P45379 298 aaPredicted RBP18.13■□□□□ 0.49
HIGD2A-201ENST00000274787 SHANK3Q9BYB0 1731 aa18.12■□□□□ 0.49
HIGD2A-201ENST00000274787 PPM1GO15355 546 aaPredicted RBP18.12■□□□□ 0.49
HIGD2A-201ENST00000274787 MEGF6O75095 1541 aa18.11■□□□□ 0.49
HIGD2A-201ENST00000274787 PKD1L3Q7Z443 1732 aa18.1■□□□□ 0.49
HIGD2A-201ENST00000274787 CC2D1BQ5T0F9 858 aaKnown RBP18.1■□□□□ 0.49
HIGD2A-201ENST00000274787 MARCH10Q8NA82 808 aaPredicted RBP18.1■□□□□ 0.49
HIGD2A-201ENST00000274787 EIF4A2Q14240 407 aaKnown RBP18.09■□□□□ 0.49
HIGD2A-201ENST00000274787 FAM182BQ5T319 152 aa18.09■□□□□ 0.49
HIGD2A-201ENST00000274787 RGPD3A6NKT7 1758 aaPredicted RBP18.09■□□□□ 0.49
HIGD2A-201ENST00000274787 RGPD4Q7Z3J3 1758 aa18.09■□□□□ 0.49
HIGD2A-201ENST00000274787 SF3B2Q13435 895 aaKnown RBP18.08■□□□□ 0.48
HIGD2A-201ENST00000274787 IGSF1Q8N6C5 1336 aa18.07■□□□□ 0.48
HIGD2A-201ENST00000274787 RAPGEF4Q8WZA2 1011 aa18.07■□□□□ 0.48
HIGD2A-201ENST00000274787 EYA1Q99502 592 aa18.07■□□□□ 0.48
HIGD2A-201ENST00000274787 NHSQ6T4R5 1651 aa18.06■□□□□ 0.48
HIGD2A-201ENST00000274787 MTHFSP49914 203 aa18.05■□□□□ 0.48
HIGD2A-201ENST00000274787 PARD3Q8TEW0 1356 aa18.04■□□□□ 0.48
HIGD2A-201ENST00000274787 TATP17735 454 aaPredicted RBP18.04■□□□□ 0.48
HIGD2A-201ENST00000274787 BAG6P46379 1132 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms