RNA–Protein interactions for RNA: ENST00000273398.7

ATP6V1A-201, Transcript of ATPase H+ transporting V1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1A, Length 4,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1A-201ENST00000273398 ALG2Q9H553 416 aa8.7□□□□□ -1.02
ATP6V1A-201ENST00000273398 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.7□□□□□ -1.02
ATP6V1A-201ENST00000273398 NOD1Q9Y239 953 aa8.7□□□□□ -1.02
ATP6V1A-201ENST00000273398 NDUFB5O43674 189 aa8.7□□□□□ -1.02
ATP6V1A-201ENST00000273398 CHMP4BP1P59074 171 aa8.7□□□□□ -1.02
ATP6V1A-201ENST00000273398 TRIM34Q9BYJ4 488 aa8.7□□□□□ -1.02
ATP6V1A-201ENST00000273398 GOLGA3Q08378 1498 aa8.69□□□□□ -1.02
ATP6V1A-201ENST00000273398 EIF4G1Q04637 1599 aaKnown RBP8.69□□□□□ -1.02
ATP6V1A-201ENST00000273398 DZIP3Q86Y13 1208 aaKnown RBP8.69□□□□□ -1.02
ATP6V1A-201ENST00000273398 U2SURPO15042 1029 aaKnown RBP8.69□□□□□ -1.02
ATP6V1A-201ENST00000273398 HOXA2O43364 376 aa8.69□□□□□ -1.02
ATP6V1A-201ENST00000273398 DNAAF2Q9NVR5 837 aaKnown RBP8.69□□□□□ -1.02
ATP6V1A-201ENST00000273398 CFAP99D6REC4 459 aa8.68□□□□□ -1.02
ATP6V1A-201ENST00000273398 GALR2O43603 387 aaPredicted RBP8.68□□□□□ -1.02
ATP6V1A-201ENST00000273398 WDR75Q8IWA0 830 aaKnown RBP8.68□□□□□ -1.02
ATP6V1A-201ENST00000273398 STK10O94804 968 aaKnown RBP8.68□□□□□ -1.02
ATP6V1A-201ENST00000273398 SFI1A8K8P3 1242 aa8.68□□□□□ -1.02
ATP6V1A-201ENST00000273398 VPS37DQ86XT2 251 aa8.68□□□□□ -1.02
ATP6V1A-201ENST00000273398 GJD4Q96KN9 370 aaPredicted RBP8.68□□□□□ -1.02
ATP6V1A-201ENST00000273398 ADAM33Q9BZ11 813 aa8.68□□□□□ -1.02
ATP6V1A-201ENST00000273398 MYH16Q9H6N6 1097 aa8.68□□□□□ -1.02
ATP6V1A-201ENST00000273398 TNIKQ9UKE5 1360 aa8.68□□□□□ -1.02
ATP6V1A-201ENST00000273398 LDHBP07195 334 aaKnown RBP8.67□□□□□ -1.02
ATP6V1A-201ENST00000273398 ATP5J2-PTCD1G3V325 749 aa8.67□□□□□ -1.02
ATP6V1A-201ENST00000273398 RAB11FIP3O75154 756 aa8.67□□□□□ -1.02
ATP6V1A-201ENST00000273398 ATP1A2P50993 1020 aa8.67□□□□□ -1.02
ATP6V1A-201ENST00000273398 HAX1O00165 279 aa8.67□□□□□ -1.02
ATP6V1A-201ENST00000273398 RNF187Q5TA31 235 aaPredicted RBP8.67□□□□□ -1.02
ATP6V1A-201ENST00000273398 SORBS3O60504 671 aa8.66□□□□□ -1.02
ATP6V1A-201ENST00000273398 NR1H3Q13133 447 aa8.66□□□□□ -1.02
ATP6V1A-201ENST00000273398 TMX4Q9H1E5 349 aaPredicted RBP8.66□□□□□ -1.02
ATP6V1A-201ENST00000273398 SSFA2P28290 1259 aa8.66□□□□□ -1.02
ATP6V1A-201ENST00000273398 FBXW10Q5XX13 1052 aa8.66□□□□□ -1.02
ATP6V1A-201ENST00000273398 SSBP05455 408 aaKnown RBP eCLIP8.65□□□□□ -1.02
ATP6V1A-201ENST00000273398 C8orf34Q49A92 452 aa8.65□□□□□ -1.02
ATP6V1A-201ENST00000273398 YTHDC1Q96MU7 727 aaKnown RBP8.65□□□□□ -1.02
ATP6V1A-201ENST00000273398 DUSP9Q99956 384 aaKnown RBP8.65□□□□□ -1.02
ATP6V1A-201ENST00000273398 EEA1Q15075 1411 aa8.65□□□□□ -1.02
ATP6V1A-201ENST00000273398 LNPKQ9C0E8 428 aa8.65□□□□□ -1.02
ATP6V1A-201ENST00000273398 ZNF76P36508 570 aa8.65□□□□□ -1.03
ATP6V1A-201ENST00000273398 CCDC102BQ68D86 513 aa8.65□□□□□ -1.03
ATP6V1A-201ENST00000273398 TMEM92Q6UXU6 159 aa8.65□□□□□ -1.03
ATP6V1A-201ENST00000273398 TXNDC2Q86VQ3 553 aa8.65□□□□□ -1.03
ATP6V1A-201ENST00000273398 NGLY1Q96IV0 654 aa8.65□□□□□ -1.03
ATP6V1A-201ENST00000273398 DOLKQ9UPQ8 538 aa8.65□□□□□ -1.03
ATP6V1A-201ENST00000273398 CUX2O14529 1486 aa8.65□□□□□ -1.03
ATP6V1A-201ENST00000273398 PTGER2P43116 358 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 GTF2IP78347 998 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 CCDC144BQ3MJ40 725 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 ACBD3Q9H3P7 528 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 DCTN4Q9UJW0 460 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 PCDHGC3Q9UN70 934 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 CFHP08603 1231 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 SWT1Q5T5J6 900 aaKnown RBP8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 PLPP7Q8NBV4 271 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 RNF34Q969K3 372 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 DCBLD2Q96PD2 775 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 CEP164Q9UPV0 1460 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 SCAMP3O14828 347 aaKnown RBP8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 KHSRPQ92945 711 aaKnown RBP eCLIP8.64□□□□□ -1.032e-7■■□□□ 11.8
ATP6V1A-201ENST00000273398 TATDN2Q93075 761 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 PROX2Q3B8N5 592 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 TRIM50Q86XT4 487 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 CPLX3Q8WVH0 158 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 KCNK17Q96T54 332 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 TMUB1Q9BVT8 246 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 MAP10Q9P2G4 905 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 GNEQ9Y223 722 aaKnown RBP8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 KIF27Q86VH2 1401 aa8.64□□□□□ -1.03
ATP6V1A-201ENST00000273398 F6X3S4 739 aa8.63□□□□□ -1.03
ATP6V1A-201ENST00000273398 CNGA1P29973 690 aa8.63□□□□□ -1.03
ATP6V1A-201ENST00000273398 SEC13P55735 322 aa8.63□□□□□ -1.03
ATP6V1A-201ENST00000273398 TRIM55Q9BYV6 548 aa8.63□□□□□ -1.03
ATP6V1A-201ENST00000273398 RAPGEF2Q9Y4G8 1499 aa8.63□□□□□ -1.03
ATP6V1A-201ENST00000273398 CHRDL2Q6WN34 429 aa8.63□□□□□ -1.03
ATP6V1A-201ENST00000273398 KLHL42Q9P2K6 505 aa8.63□□□□□ -1.03
ATP6V1A-201ENST00000273398 ATN1P54259 1190 aaPredicted RBP8.63□□□□□ -1.03
ATP6V1A-201ENST00000273398 FAM174AQ8TBP5 190 aa8.63□□□□□ -1.03
ATP6V1A-201ENST00000273398 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.63□□□□□ -1.03
ATP6V1A-201ENST00000273398 USP46P62068 366 aa8.63□□□□□ -1.03
ATP6V1A-201ENST00000273398 SLKQ9H2G2 1235 aaPredicted RBP8.62□□□□□ -1.03
ATP6V1A-201ENST00000273398 CADPSQ9ULU8 1353 aa8.62□□□□□ -1.03
ATP6V1A-201ENST00000273398 RECKO95980 971 aa8.62□□□□□ -1.03
ATP6V1A-201ENST00000273398 PPP4R4Q6NUP7 873 aa8.62□□□□□ -1.03
ATP6V1A-201ENST00000273398 MRVI1Q9Y6F6 885 aa8.62□□□□□ -1.03
ATP6V1A-201ENST00000273398 NPAS4Q8IUM7 802 aa8.62□□□□□ -1.03
ATP6V1A-201ENST00000273398 GGT7Q9UJ14 662 aa8.62□□□□□ -1.03
ATP6V1A-201ENST00000273398 PCDHGA4Q9Y5G9 962 aa8.62□□□□□ -1.03
ATP6V1A-201ENST00000273398 DNM1Q05193 864 aaKnown RBP8.61□□□□□ -1.03
ATP6V1A-201ENST00000273398 SYNJ1O43426 1573 aa8.61□□□□□ -1.03
ATP6V1A-201ENST00000273398 PDCD7Q8N8D1 485 aaKnown RBP8.61□□□□□ -1.03
ATP6V1A-201ENST00000273398 CT47A1Q5JQC4 288 aaPredicted RBP8.61□□□□□ -1.03
ATP6V1A-201ENST00000273398 TSEN2Q8NCE0 465 aaKnown RBP8.61□□□□□ -1.03
ATP6V1A-201ENST00000273398 ZPR1O75312 459 aa8.61□□□□□ -1.03
ATP6V1A-201ENST00000273398 NCAPD3P42695 1498 aa8.6□□□□□ -1.03
ATP6V1A-201ENST00000273398 FKBP4Q02790 459 aaKnown RBP eCLIP8.6□□□□□ -1.03
ATP6V1A-201ENST00000273398 FILIP1Q7Z7B0 1213 aa8.6□□□□□ -1.03
ATP6V1A-201ENST00000273398 PTPREP23469 700 aa8.6□□□□□ -1.03
ATP6V1A-201ENST00000273398 MRFAP1L1Q96HT8 127 aa8.6□□□□□ -1.03
ATP6V1A-201ENST00000273398 CDCA7Q9BWT1 371 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms