RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 NANOS1Q8WY41 292 aaKnown RBP6.97□□□□□ -1.29
CDRT1-201ENST00000261644 SLC24A3Q9HC58 644 aa6.97□□□□□ -1.29
CDRT1-201ENST00000261644 PGPEP1Q9NXJ5 209 aa6.97□□□□□ -1.29
CDRT1-201ENST00000261644 FKBPLQ9UIM3 349 aa6.97□□□□□ -1.29
CDRT1-201ENST00000261644 MAGEB6P1A0A0J9YX57 407 aa6.96□□□□□ -1.3
CDRT1-201ENST00000261644 TTLL8A6PVC2 850 aa6.96□□□□□ -1.3
CDRT1-201ENST00000261644 SPINT1O43278 529 aa6.96□□□□□ -1.3
CDRT1-201ENST00000261644 DHX9Q08211 1270 aaKnown RBP6.96□□□□□ -1.3
CDRT1-201ENST00000261644 SH3D19Q5HYK7 790 aa6.96□□□□□ -1.3
CDRT1-201ENST00000261644 PPP1R26Q5T8A7 1209 aaPredicted RBP6.96□□□□□ -1.3
CDRT1-201ENST00000261644 CTDSPL2Q05D32 466 aa6.95□□□□□ -1.3
CDRT1-201ENST00000261644 SKIV2LQ15477 1246 aaKnown RBP6.95□□□□□ -1.3
CDRT1-201ENST00000261644 ARHGAP9Q9BRR9 750 aa6.95□□□□□ -1.3
CDRT1-201ENST00000261644 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDRT1-201ENST00000261644 KCNMA1Q12791 1236 aa6.94□□□□□ -1.3
CDRT1-201ENST00000261644 SLC10A4Q96EP9 437 aa6.94□□□□□ -1.3
CDRT1-201ENST00000261644 KCTD15Q96SI1 283 aaPredicted RBP6.93□□□□□ -1.3
CDRT1-201ENST00000261644 CARD14Q9BXL6 1004 aa6.93□□□□□ -1.3
CDRT1-201ENST00000261644 PTSQ03393 145 aa6.92□□□□□ -1.3
CDRT1-201ENST00000261644 DDRGK1Q96HY6 314 aa6.92□□□□□ -1.3
CDRT1-201ENST00000261644 OCSTAMPQ9BR26 566 aa6.92□□□□□ -1.3
CDRT1-201ENST00000261644 POLR3EQ9NVU0 708 aa6.92□□□□□ -1.3
CDRT1-201ENST00000261644 GSK3AP49840 483 aa6.91□□□□□ -1.3
CDRT1-201ENST00000261644 KRT76Q01546 638 aa6.91□□□□□ -1.3
CDRT1-201ENST00000261644 PTK2Q05397 1052 aa6.91□□□□□ -1.3
CDRT1-201ENST00000261644 NBPF20Q3BBV1 942 aa6.91□□□□□ -1.3
CDRT1-201ENST00000261644 INTS6LQ5JSJ4 861 aaKnown RBP6.91□□□□□ -1.3
CDRT1-201ENST00000261644 SLC35F4A4IF30 521 aa6.9□□□□□ -1.3
CDRT1-201ENST00000261644 ZBTB33Q86T24 672 aa6.9□□□□□ -1.3
CDRT1-201ENST00000261644 PNMA1Q8ND90 353 aa6.9□□□□□ -1.3
CDRT1-201ENST00000261644 LRRN4Q8WUT4 740 aa6.9□□□□□ -1.3
CDRT1-201ENST00000261644 RNF225M0QZC1 329 aaPredicted RBP6.89□□□□□ -1.31
CDRT1-201ENST00000261644 CBLBQ13191 982 aa6.89□□□□□ -1.31
CDRT1-201ENST00000261644 CCDC155Q8N6L0 562 aa6.89□□□□□ -1.31
CDRT1-201ENST00000261644 SLURP2P0DP57 97 aa6.88□□□□□ -1.31
CDRT1-201ENST00000261644 NR6A1Q15406 480 aa6.88□□□□□ -1.31
CDRT1-201ENST00000261644 FBXO31Q5XUX0 539 aaPredicted RBP6.88□□□□□ -1.31
CDRT1-201ENST00000261644 GPR161Q8N6U8 529 aaKnown RBP6.88□□□□□ -1.31
CDRT1-201ENST00000261644 ADAM32Q8TC27 787 aa6.88□□□□□ -1.31
CDRT1-201ENST00000261644 TRIM52Q96A61 297 aa6.88□□□□□ -1.31
CDRT1-201ENST00000261644 ESPNB1AK53 854 aa6.87□□□□□ -1.31
CDRT1-201ENST00000261644 ITGA6P23229 1130 aa6.87□□□□□ -1.31
CDRT1-201ENST00000261644 KDM4CQ9H3R0 1056 aa6.87□□□□□ -1.31
CDRT1-201ENST00000261644 LOC100996750A0A140TA64 210 aa6.86□□□□□ -1.31
CDRT1-201ENST00000261644 SEPT12Q8IYM1 358 aa6.86□□□□□ -1.31
CDRT1-201ENST00000261644 RNF217Q8TC41 542 aa6.86□□□□□ -1.31
CDRT1-201ENST00000261644 COL25A1Q9BXS0 654 aaPredicted RBP6.86□□□□□ -1.31
CDRT1-201ENST00000261644 KRTAP4-6Q9BYQ5 205 aa6.86□□□□□ -1.31
CDRT1-201ENST00000261644 ADH1AP07327 375 aa6.85□□□□□ -1.31
CDRT1-201ENST00000261644 CTSOP43234 321 aaPredicted RBP6.85□□□□□ -1.31
CDRT1-201ENST00000261644 CCDC125Q86Z20 511 aa6.85□□□□□ -1.31
CDRT1-201ENST00000261644 PROCA1Q8NCQ7 364 aaPredicted RBP6.85□□□□□ -1.31
CDRT1-201ENST00000261644 CNTNAP3BQ96NU0 1288 aa6.85□□□□□ -1.31
CDRT1-201ENST00000261644 CNTNAP3Q9BZ76 1288 aa6.85□□□□□ -1.31
CDRT1-201ENST00000261644 GOPCQ9HD26 462 aa6.85□□□□□ -1.31
CDRT1-201ENST00000261644 SENP3-EIF4A1A0A087X0R7 540 aa6.84□□□□□ -1.31
CDRT1-201ENST00000261644 FIGNL2A6NMB9 653 aa6.84□□□□□ -1.31
CDRT1-201ENST00000261644 LILRA1O75019 489 aa6.84□□□□□ -1.31
CDRT1-201ENST00000261644 FAM117AQ9C073 453 aa6.84□□□□□ -1.31
CDRT1-201ENST00000261644 ADAMTS8Q9UP79 889 aa6.84□□□□□ -1.31
CDRT1-201ENST00000261644 AP1G2O75843 785 aa6.83□□□□□ -1.32
CDRT1-201ENST00000261644 USP17L8P0C7I0 530 aa6.83□□□□□ -1.32
CDRT1-201ENST00000261644 RNFT1Q5M7Z0 435 aa6.83□□□□□ -1.32
CDRT1-201ENST00000261644 ZNF385CQ66K41 422 aaPredicted RBP6.83□□□□□ -1.32
CDRT1-201ENST00000261644 SV2AQ7L0J3 742 aa6.83□□□□□ -1.32
CDRT1-201ENST00000261644 KDF1Q8NAX2 398 aaPredicted RBP6.83□□□□□ -1.32
CDRT1-201ENST00000261644 ZNF784Q8NCA9 323 aaPredicted RBP6.83□□□□□ -1.32
CDRT1-201ENST00000261644 INSM2Q96T92 566 aaPredicted RBP6.83□□□□□ -1.32
CDRT1-201ENST00000261644 ARHGEF15O94989 841 aa6.82□□□□□ -1.32
CDRT1-201ENST00000261644 PTGIRP43119 386 aa6.82□□□□□ -1.32
CDRT1-201ENST00000261644 RELBQ01201 579 aa6.82□□□□□ -1.32
CDRT1-201ENST00000261644 FOXD4L5Q5VV16 416 aaPredicted RBP6.82□□□□□ -1.32
CDRT1-201ENST00000261644 TMEM151AQ8N4L1 468 aa6.82□□□□□ -1.32
CDRT1-201ENST00000261644 GMCL1Q96IK5 515 aa6.82□□□□□ -1.32
CDRT1-201ENST00000261644 AGBL1Q96MI9 1066 aa6.82□□□□□ -1.32
CDRT1-201ENST00000261644 ERVH48-1M5A8F1 160 aa6.81□□□□□ -1.32
CDRT1-201ENST00000261644 GPC1P35052 558 aa6.81□□□□□ -1.32
CDRT1-201ENST00000261644 RASSF7Q02833 373 aa6.81□□□□□ -1.32
CDRT1-201ENST00000261644 EPS8L1Q8TE68 723 aa6.81□□□□□ -1.32
CDRT1-201ENST00000261644 GPBP1L1Q9HC44 474 aaPredicted RBP6.81□□□□□ -1.32
CDRT1-201ENST00000261644 HMX1Q9NP08 348 aaPredicted RBP6.81□□□□□ -1.32
CDRT1-201ENST00000261644 POLMQ9NP87 494 aaPredicted RBP6.81□□□□□ -1.32
CDRT1-201ENST00000261644 RFC5P40937 340 aa6.8□□□□□ -1.32
CDRT1-201ENST00000261644 RNF144AP50876 292 aaPredicted RBP6.8□□□□□ -1.32
CDRT1-201ENST00000261644 DZIP3Q86Y13 1208 aaKnown RBP6.8□□□□□ -1.32
CDRT1-201ENST00000261644 TMPRSS4Q9NRS4 437 aa6.8□□□□□ -1.32
CDRT1-201ENST00000261644 SOCS7O14512 581 aa6.79□□□□□ -1.32
CDRT1-201ENST00000261644 GDF11O95390 407 aa6.79□□□□□ -1.32
CDRT1-201ENST00000261644 ADD1P35611 737 aaKnown RBP6.79□□□□□ -1.32
CDRT1-201ENST00000261644 SRSF11Q05519 484 aaKnown RBP6.79□□□□□ -1.32
CDRT1-201ENST00000261644 LYSMD3Q7Z3D4 306 aa6.79□□□□□ -1.32
CDRT1-201ENST00000261644 VWA5B2Q8N398 1253 aa6.79□□□□□ -1.32
CDRT1-201ENST00000261644 SVOPQ8N4V2 548 aa6.79□□□□□ -1.32
CDRT1-201ENST00000261644 TRIM34Q9BYJ4 488 aa6.79□□□□□ -1.32
CDRT1-201ENST00000261644 TMEM259Q4ZIN3 620 aa6.78□□□□□ -1.32
CDRT1-201ENST00000261644 KANK3Q6NY19 840 aa6.78□□□□□ -1.32
CDRT1-201ENST00000261644 ZNF395Q9H8N7 513 aaPredicted RBP6.78□□□□□ -1.32
CDRT1-201ENST00000261644 DNMT3AQ9Y6K1 912 aaPredicted RBP6.78□□□□□ -1.32
CDRT1-201ENST00000261644 CDC14CA4D256 554 aa6.77□□□□□ -1.33
CDRT1-201ENST00000261644 MCCD1P59942 119 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms