RNA–Protein interactions for RNA: ENST00000250003.3

MYOD1-201, Transcript of myogenic differentiation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MYOD1, Length 1,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYOD1-201ENST00000250003 LTN1O94822 1766 aa22.2■■□□□ 1.14
MYOD1-201ENST00000250003 PPM1GO15355 546 aaPredicted RBP22.2■■□□□ 1.14
MYOD1-201ENST00000250003 UNC5CLQ8IV45 518 aa22.2■■□□□ 1.14
MYOD1-201ENST00000250003 CDK12Q9NYV4 1490 aaPredicted RBP22.19■■□□□ 1.14
MYOD1-201ENST00000250003 USP19O94966 1318 aa22.19■■□□□ 1.14
MYOD1-201ENST00000250003 FAM83GA6ND36 823 aa22.19■■□□□ 1.14
MYOD1-201ENST00000250003 FAM9BQ8IZU0 186 aa22.19■■□□□ 1.14
MYOD1-201ENST00000250003 ATRNO75882 1429 aa22.18■■□□□ 1.14
MYOD1-201ENST00000250003 SLIT2O94813 1529 aa22.18■■□□□ 1.14
MYOD1-201ENST00000250003 COL3A1P02461 1466 aaPredicted RBP22.18■■□□□ 1.14
MYOD1-201ENST00000250003 PNISRQ8TF01 805 aaKnown RBP22.17■■□□□ 1.14
MYOD1-201ENST00000250003 GJD4Q96KN9 370 aaPredicted RBP22.16■■□□□ 1.14
MYOD1-201ENST00000250003 CFAP53Q96M91 514 aa22.16■■□□□ 1.14
MYOD1-201ENST00000250003 MAP3K19Q56UN5 1328 aa22.16■■□□□ 1.14
MYOD1-201ENST00000250003 ABCA3Q99758 1704 aa22.16■■□□□ 1.14
MYOD1-201ENST00000250003 GCP02774 474 aa22.15■■□□□ 1.14
MYOD1-201ENST00000250003 KCNH5Q8NCM2 988 aa22.15■■□□□ 1.14
MYOD1-201ENST00000250003 YTHDC1Q96MU7 727 aaKnown RBP22.15■■□□□ 1.14
MYOD1-201ENST00000250003 RGS12O14924 1447 aa22.13■■□□□ 1.13
MYOD1-201ENST00000250003 WDR43Q15061 677 aaKnown RBP eCLIP22.1■■□□□ 1.13
MYOD1-201ENST00000250003 BTG4Q9NY30 223 aa22.1■■□□□ 1.13
MYOD1-201ENST00000250003 INSRP06213 1382 aa22.1■■□□□ 1.13
MYOD1-201ENST00000250003 FLT4P35916 1363 aa22.1■■□□□ 1.13
MYOD1-201ENST00000250003 VPS72Q15906 364 aa22.1■■□□□ 1.13
MYOD1-201ENST00000250003 ZBTB7CA1YPR0 619 aa22.09■■□□□ 1.13
MYOD1-201ENST00000250003 AMPHP49418 695 aa22.09■■□□□ 1.13
MYOD1-201ENST00000250003 PRDM11Q9NQV5 511 aa22.09■■□□□ 1.13
MYOD1-201ENST00000250003 ZC3H6P61129 1189 aaKnown RBP22.08■■□□□ 1.13
MYOD1-201ENST00000250003 UPF1Q92900 1129 aaKnown RBP eCLIP22.08■■□□□ 1.12
MYOD1-201ENST00000250003 RTL1A6NKG5 1358 aa22.07■■□□□ 1.12
MYOD1-201ENST00000250003 KIF24Q5T7B8 1368 aa22.07■■□□□ 1.12
MYOD1-201ENST00000250003 KIAA0232Q92628 1395 aa22.07■■□□□ 1.12
MYOD1-201ENST00000250003 DIAPH1O60610 1272 aaKnown RBP22.07■■□□□ 1.12
MYOD1-201ENST00000250003 HSP90AB2PQ58FF8 381 aa22.07■■□□□ 1.12
MYOD1-201ENST00000250003 CCDC9Q9Y3X0 531 aaKnown RBP22.07■■□□□ 1.12
MYOD1-201ENST00000250003 ADAMTS8Q9UP79 889 aa22.06■■□□□ 1.12
MYOD1-201ENST00000250003 HOXC9P31274 260 aa22.06■■□□□ 1.12
MYOD1-201ENST00000250003 CHRNA2Q15822 529 aa22.06■■□□□ 1.12
MYOD1-201ENST00000250003 ARHGEF25Q86VW2 580 aa22.06■■□□□ 1.12
MYOD1-201ENST00000250003 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.05■■□□□ 1.12
MYOD1-201ENST00000250003 RGPD5Q99666 1765 aa22.04■■□□□ 1.12
MYOD1-201ENST00000250003 U2SURPO15042 1029 aaKnown RBP22.03■■□□□ 1.12
MYOD1-201ENST00000250003 NWD2Q9ULI1 1742 aa22.03■■□□□ 1.12
MYOD1-201ENST00000250003 PLCH1Q4KWH8 1693 aa22.03■■□□□ 1.12
MYOD1-201ENST00000250003 BLMP54132 1417 aaPredicted RBP22.03■■□□□ 1.12
MYOD1-201ENST00000250003 IL13P35225 146 aa22.03■■□□□ 1.12
MYOD1-201ENST00000250003 EIF4A2Q14240 407 aaKnown RBP22.03■■□□□ 1.12
MYOD1-201ENST00000250003 NUDCQ9Y266 331 aa22.03■■□□□ 1.12
MYOD1-201ENST00000250003 COL18A1P39060 1754 aa22.02■■□□□ 1.12
MYOD1-201ENST00000250003 GLI3P10071 1580 aa22.02■■□□□ 1.12
MYOD1-201ENST00000250003 COL14A1Q05707 1796 aaKnown RBP22.02■■□□□ 1.11
MYOD1-201ENST00000250003 ONECUT3O60422 494 aaPredicted RBP22.01■■□□□ 1.11
MYOD1-201ENST00000250003 U2AF1L5P0DN76 240 aaPredicted RBP22.01■■□□□ 1.11
MYOD1-201ENST00000250003 U2AF1Q01081 240 aaKnown RBP eCLIP22.01■■□□□ 1.11
MYOD1-201ENST00000250003 IP6K1Q92551 441 aa22.01■■□□□ 1.11
MYOD1-201ENST00000250003 RGPD1P0DJD0 1748 aa22.01■■□□□ 1.11
MYOD1-201ENST00000250003 CPDO75976 1380 aa22.01■■□□□ 1.11
MYOD1-201ENST00000250003 SEPT12Q8IYM1 358 aa21.99■■□□□ 1.11
MYOD1-201ENST00000250003 HNRNPUQ00839 825 aaKnown RBP eCLIP21.99■■□□□ 1.11
MYOD1-201ENST00000250003 ABCC6O95255 1503 aa21.99■■□□□ 1.11
MYOD1-201ENST00000250003 SENP3-EIF4A1A0A087X0R7 540 aa21.98■■□□□ 1.11
MYOD1-201ENST00000250003 CCDC146Q8IYE0 955 aa21.98■■□□□ 1.11
MYOD1-201ENST00000250003 LTV1Q96GA3 475 aaPredicted RBP21.98■■□□□ 1.11
MYOD1-201ENST00000250003 STRN4Q9NRL3 753 aa21.97■■□□□ 1.11
MYOD1-201ENST00000250003 AXIN2Q9Y2T1 843 aa21.97■■□□□ 1.11
MYOD1-201ENST00000250003 RGPD2P0DJD1 1756 aa21.97■■□□□ 1.11
MYOD1-201ENST00000250003 LMO7Q8WWI1 1683 aa21.96■■□□□ 1.11
MYOD1-201ENST00000250003 SPATA31A5Q5VU36 1347 aa21.96■■□□□ 1.11
MYOD1-201ENST00000250003 SPATA31A7Q8IWB4 1347 aa21.96■■□□□ 1.11
MYOD1-201ENST00000250003 EVA1CP58658 441 aa21.96■■□□□ 1.11
MYOD1-201ENST00000250003 FAM98CQ17RN3 349 aaKnown RBP21.96■■□□□ 1.11
MYOD1-201ENST00000250003 EP400Q96L91 3159 aa21.95■■□□□ 1.1
MYOD1-201ENST00000250003 NRAPQ86VF7 1730 aa21.95■■□□□ 1.1
MYOD1-201ENST00000250003 HMOX1P09601 288 aa21.94■■□□□ 1.1
MYOD1-201ENST00000250003 A0A0G2JS52 829 aa21.92■■□□□ 1.1
MYOD1-201ENST00000250003 MYT1Q01538 1121 aa21.92■■□□□ 1.1
MYOD1-201ENST00000250003 ANKRD24Q8TF21 1146 aa21.92■■□□□ 1.1
MYOD1-201ENST00000250003 EYA1Q99502 592 aa21.92■■□□□ 1.1
MYOD1-201ENST00000250003 ERBB3P21860 1342 aa21.92■■□□□ 1.1
MYOD1-201ENST00000250003 SPATA31A1Q5TZJ5 1347 aa21.92■■□□□ 1.1
MYOD1-201ENST00000250003 CAMTA1Q9Y6Y1 1673 aa21.92■■□□□ 1.1
MYOD1-201ENST00000250003 AEBP1Q8IUX7 1158 aa21.91■■□□□ 1.1
MYOD1-201ENST00000250003 RSPH6AQ9H0K4 717 aa21.91■■□□□ 1.1
MYOD1-201ENST00000250003 IGSF1Q8N6C5 1336 aa21.9■■□□□ 1.1
MYOD1-201ENST00000250003 SULT6B1Q6IMI4 303 aa21.9■■□□□ 1.1
MYOD1-201ENST00000250003 LARP1Q6PKG0 1096 aaKnown RBP21.9■■□□□ 1.1
MYOD1-201ENST00000250003 FAM208AQ9UK61 1670 aaKnown RBP21.9■■□□□ 1.1
MYOD1-201ENST00000250003 KRT27Q7Z3Y8 459 aa21.9■■□□□ 1.1
MYOD1-201ENST00000250003 USP35Q9P2H5 1018 aa21.9■■□□□ 1.1
MYOD1-201ENST00000250003 PRKAR2BP31323 418 aa21.89■■□□□ 1.09
MYOD1-201ENST00000250003 RUNDC1Q96C34 613 aa21.89■■□□□ 1.09
MYOD1-201ENST00000250003 PLEKHF1Q96S99 279 aa21.89■■□□□ 1.09
MYOD1-201ENST00000250003 FCHSD2O94868 740 aa21.88■■□□□ 1.09
MYOD1-201ENST00000250003 COL5A2P05997 1499 aaPredicted RBP21.88■■□□□ 1.09
MYOD1-201ENST00000250003 USHBP1Q8N6Y0 703 aa21.87■■□□□ 1.09
MYOD1-201ENST00000250003 SALL2Q9Y467 1007 aaPredicted RBP21.87■■□□□ 1.09
MYOD1-201ENST00000250003 APAF1O14727 1248 aa21.87■■□□□ 1.09
MYOD1-201ENST00000250003 KDRP35968 1356 aa21.86■■□□□ 1.09
MYOD1-201ENST00000250003 NBPF6Q5VWK0 638 aa21.86■■□□□ 1.09
MYOD1-201ENST00000250003 CCDC125Q86Z20 511 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms