RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 POLR3GLQ9BT43 218 aa14.71□□□□□ -0.05
PFDN5-201ENST00000243040 PARP4Q9UKK3 1724 aaKnown RBP14.7□□□□□ -0.06
PFDN5-201ENST00000243040 CRB1P82279 1406 aa14.69□□□□□ -0.06
PFDN5-201ENST00000243040 SOX12O15370 315 aa14.69□□□□□ -0.06
PFDN5-201ENST00000243040 ONECUT3O60422 494 aaPredicted RBP14.69□□□□□ -0.06
PFDN5-201ENST00000243040 CCDC7Q96M83 1385 aa14.69□□□□□ -0.06
PFDN5-201ENST00000243040 CGNL1Q0VF96 1302 aa14.68□□□□□ -0.06
PFDN5-201ENST00000243040 SPATA31A1Q5TZJ5 1347 aa14.68□□□□□ -0.06
PFDN5-201ENST00000243040 BLMP54132 1417 aaPredicted RBP14.68□□□□□ -0.06
PFDN5-201ENST00000243040 CCDC9Q9Y3X0 531 aaKnown RBP14.68□□□□□ -0.06
PFDN5-201ENST00000243040 MAP2P11137 1827 aaKnown RBP14.68□□□□□ -0.06
PFDN5-201ENST00000243040 PEAK1Q9H792 1746 aa14.67□□□□□ -0.06
PFDN5-201ENST00000243040 GGNBP2Q9H3C7 697 aa14.67□□□□□ -0.06
PFDN5-201ENST00000243040 STRN4Q9NRL3 753 aa14.67□□□□□ -0.06
PFDN5-201ENST00000243040 AXIN2Q9Y2T1 843 aa14.67□□□□□ -0.06
PFDN5-201ENST00000243040 RTL1A6NKG5 1358 aa14.67□□□□□ -0.06
PFDN5-201ENST00000243040 NSD2O96028 1365 aa14.67□□□□□ -0.06
PFDN5-201ENST00000243040 WDR17Q8IZU2 1322 aa14.66□□□□□ -0.06
PFDN5-201ENST00000243040 ZBTB7CA1YPR0 619 aa14.66□□□□□ -0.06
PFDN5-201ENST00000243040 EVA1CP58658 441 aa14.66□□□□□ -0.06
PFDN5-201ENST00000243040 LARP1Q6PKG0 1096 aaKnown RBP14.66□□□□□ -0.06
PFDN5-201ENST00000243040 PANK3Q9H999 370 aa14.66□□□□□ -0.06
PFDN5-201ENST00000243040 WASHC2AQ641Q2 1341 aa14.66□□□□□ -0.06
PFDN5-201ENST00000243040 EP400Q96L91 3159 aa14.65□□□□□ -0.06
PFDN5-201ENST00000243040 KIF24Q5T7B8 1368 aa14.65□□□□□ -0.06
PFDN5-201ENST00000243040 THRAP3Q9Y2W1 955 aaKnown RBP14.65□□□□□ -0.06
PFDN5-201ENST00000243040 LRRC37A3O60309 1634 aa14.65□□□□□ -0.06
PFDN5-201ENST00000243040 ERBB3P21860 1342 aa14.65□□□□□ -0.06
PFDN5-201ENST00000243040 MAP3K19Q56UN5 1328 aa14.65□□□□□ -0.06
PFDN5-201ENST00000243040 FAM98CQ17RN3 349 aaKnown RBP14.64□□□□□ -0.07
PFDN5-201ENST00000243040 BARGINQ6ZT62 677 aa14.64□□□□□ -0.07
PFDN5-201ENST00000243040 RGPD2P0DJD1 1756 aa14.63□□□□□ -0.07
PFDN5-201ENST00000243040 SEPT12Q8IYM1 358 aa14.63□□□□□ -0.07
PFDN5-201ENST00000243040 TCP11L2Q8N4U5 519 aa14.62□□□□□ -0.07
PFDN5-201ENST00000243040 IP6K1Q92551 441 aa14.62□□□□□ -0.07
PFDN5-201ENST00000243040 DISP2A7MBM2 1401 aa14.61□□□□□ -0.07
PFDN5-201ENST00000243040 TOM1L2Q6ZVM7 507 aa14.61□□□□□ -0.07
PFDN5-201ENST00000243040 FLT4P35916 1363 aa14.6□□□□□ -0.07
PFDN5-201ENST00000243040 SMG6Q86US8 1419 aaKnown RBP14.6□□□□□ -0.07
PFDN5-201ENST00000243040 FBLN1P23142 703 aa14.6□□□□□ -0.07
PFDN5-201ENST00000243040 HOXC9P31274 260 aa14.6□□□□□ -0.07
PFDN5-201ENST00000243040 ZEB1P37275 1124 aaPredicted RBP14.6□□□□□ -0.07
PFDN5-201ENST00000243040 RRS1Q15050 365 aaKnown RBP14.6□□□□□ -0.07
PFDN5-201ENST00000243040 CARD10Q9BWT7 1032 aa14.6□□□□□ -0.07
PFDN5-201ENST00000243040 RGPD1P0DJD0 1748 aa14.59□□□□□ -0.07
PFDN5-201ENST00000243040 AMPHP49418 695 aa14.59□□□□□ -0.07
PFDN5-201ENST00000243040 ANKRD24Q8TF21 1146 aa14.59□□□□□ -0.07
PFDN5-201ENST00000243040 USP35Q9P2H5 1018 aa14.59□□□□□ -0.07
PFDN5-201ENST00000243040 KNSTRNQ9Y448 316 aa14.59□□□□□ -0.07
PFDN5-201ENST00000243040 INSRP06213 1382 aa14.59□□□□□ -0.07
PFDN5-201ENST00000243040 NPC1L1Q9UHC9 1359 aa14.59□□□□□ -0.07
PFDN5-201ENST00000243040 A0A0G2JS52 829 aa14.58□□□□□ -0.08
PFDN5-201ENST00000243040 PER1O15534 1290 aaPredicted RBP14.58□□□□□ -0.08
PFDN5-201ENST00000243040 CSB-PGBD3P0DP91 1061 aa14.58□□□□□ -0.08
PFDN5-201ENST00000243040 MYT1Q01538 1121 aa14.58□□□□□ -0.08
PFDN5-201ENST00000243040 AMER1Q5JTC6 1135 aaPredicted RBP14.58□□□□□ -0.08
PFDN5-201ENST00000243040 KRT27Q7Z3Y8 459 aa14.58□□□□□ -0.08
PFDN5-201ENST00000243040 UPF1Q92900 1129 aaKnown RBP eCLIP14.58□□□□□ -0.08
PFDN5-201ENST00000243040 TNS1Q9HBL0 1735 aaKnown RBP14.57□□□□□ -0.08
PFDN5-201ENST00000243040 CDCA7Q9BWT1 371 aaPredicted RBP14.56□□□□□ -0.08
PFDN5-201ENST00000243040 EMILIN1Q9Y6C2 1016 aa14.56□□□□□ -0.08
PFDN5-201ENST00000243040 SBF2Q86WG5 1849 aa14.56□□□□□ -0.08
PFDN5-201ENST00000243040 TNS2Q63HR2 1409 aa14.56□□□□□ -0.08
PFDN5-201ENST00000243040 SHANK3Q9BYB0 1731 aa14.55□□□□□ -0.08
PFDN5-201ENST00000243040 NCAPD2Q15021 1401 aa14.55□□□□□ -0.08
PFDN5-201ENST00000243040 POLKQ9UBT6 870 aa14.54□□□□□ -0.08
PFDN5-201ENST00000243040 NLRP2Q9NX02 1062 aa14.53□□□□□ -0.08
PFDN5-201ENST00000243040 OVOS2A0A0G2JMS6 1433 aa14.52□□□□□ -0.08
PFDN5-201ENST00000243040 HSP90AB2PQ58FF8 381 aa14.52□□□□□ -0.09
PFDN5-201ENST00000243040 MORC1Q86VD1 984 aa14.52□□□□□ -0.09
PFDN5-201ENST00000243040 PKD1L3Q7Z443 1732 aa14.52□□□□□ -0.09
PFDN5-201ENST00000243040 BCL9O00512 1426 aa14.51□□□□□ -0.09
PFDN5-201ENST00000243040 DDB1Q16531 1140 aa14.51□□□□□ -0.09
PFDN5-201ENST00000243040 CCDC125Q86Z20 511 aa14.51□□□□□ -0.09
PFDN5-201ENST00000243040 LTV1Q96GA3 475 aaPredicted RBP14.51□□□□□ -0.09
PFDN5-201ENST00000243040 MEGF6O75095 1541 aa14.51□□□□□ -0.09
PFDN5-201ENST00000243040 IL2RBP14784 551 aa14.5□□□□□ -0.09
PFDN5-201ENST00000243040 TNNT2P45379 298 aaPredicted RBP14.5□□□□□ -0.09
PFDN5-201ENST00000243040 PDE3BQ13370 1112 aa14.5□□□□□ -0.09
PFDN5-201ENST00000243040 RGPD3A6NKT7 1758 aaPredicted RBP14.5□□□□□ -0.09
PFDN5-201ENST00000243040 RGPD4Q7Z3J3 1758 aa14.5□□□□□ -0.09
PFDN5-201ENST00000243040 NHSQ6T4R5 1651 aa14.49□□□□□ -0.09
PFDN5-201ENST00000243040 PPM1GO15355 546 aaPredicted RBP14.48□□□□□ -0.09
PFDN5-201ENST00000243040 NBPF6Q5VWK0 638 aa14.48□□□□□ -0.09
PFDN5-201ENST00000243040 FAM196AQ6ZSG2 479 aa14.48□□□□□ -0.09
PFDN5-201ENST00000243040 NBPF4Q96M43 638 aa14.48□□□□□ -0.09
PFDN5-201ENST00000243040 CC2D1BQ5T0F9 858 aaKnown RBP14.47□□□□□ -0.09
PFDN5-201ENST00000243040 FAM182BQ5T319 152 aa14.47□□□□□ -0.09
PFDN5-201ENST00000243040 PLEKHG2Q9H7P9 1386 aa14.47□□□□□ -0.09
PFDN5-201ENST00000243040 EXOC5O00471 708 aa14.46□□□□□ -0.09
PFDN5-201ENST00000243040 RREB1Q92766 1687 aa14.46□□□□□ -0.1
PFDN5-201ENST00000243040 EIF4A2Q14240 407 aaKnown RBP14.45□□□□□ -0.1
PFDN5-201ENST00000243040 MARCH10Q8NA82 808 aaPredicted RBP14.45□□□□□ -0.1
PFDN5-201ENST00000243040 DOT1LQ8TEK3 1739 aa14.45□□□□□ -0.1
PFDN5-201ENST00000243040 COL3A1P02461 1466 aaPredicted RBP14.44□□□□□ -0.1
PFDN5-201ENST00000243040 IGSF1Q8N6C5 1336 aa14.44□□□□□ -0.1
PFDN5-201ENST00000243040 USHBP1Q8N6Y0 703 aa14.44□□□□□ -0.1
PFDN5-201ENST00000243040 SF3B2Q13435 895 aaKnown RBP14.43□□□□□ -0.1
PFDN5-201ENST00000243040 EYA1Q99502 592 aa14.43□□□□□ -0.1
PFDN5-201ENST00000243040 MTHFSP49914 203 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms