RNA–Protein interactions for RNA: ENST00000238633.6

NPC2-201, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene NPC2, Length 796 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-201ENST00000238633 FHDC1Q9C0D6 1143 aaPredicted RBP13.82□□□□□ -0.2
NPC2-201ENST00000238633 OVOS2A0A0G2JMS6 1433 aa13.81□□□□□ -0.2
NPC2-201ENST00000238633 OVOS2A0A0J9YW53 1432 aa13.81□□□□□ -0.2
NPC2-201ENST00000238633 OVOS2Q6IE36 1432 aa13.81□□□□□ -0.2
NPC2-201ENST00000238633 C11orf95C9JLR9 678 aaPredicted RBP13.81□□□□□ -0.2
NPC2-201ENST00000238633 IFFO2Q5TF58 517 aa13.81□□□□□ -0.2
NPC2-201ENST00000238633 MARCH10Q8NA82 808 aaPredicted RBP13.81□□□□□ -0.2
NPC2-201ENST00000238633 KDM2AQ9Y2K7 1162 aa13.81□□□□□ -0.2
NPC2-201ENST00000238633 GOLGB1Q14789 3259 aaKnown RBP13.81□□□□□ -0.2
NPC2-201ENST00000238633 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
NPC2-201ENST00000238633 CRB1P82279 1406 aa13.8□□□□□ -0.2
NPC2-201ENST00000238633 MYOM1P52179 1685 aa13.79□□□□□ -0.2
NPC2-201ENST00000238633 PARP4Q9UKK3 1724 aaKnown RBP13.79□□□□□ -0.2
NPC2-201ENST00000238633 CACNB1Q02641 598 aaPredicted RBP13.79□□□□□ -0.2
NPC2-201ENST00000238633 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
NPC2-201ENST00000238633 DDB1Q16531 1140 aa13.78□□□□□ -0.2
NPC2-201ENST00000238633 DCAF11Q8TEB1 546 aa13.78□□□□□ -0.2
NPC2-201ENST00000238633 BCL9O00512 1426 aa13.77□□□□□ -0.21
NPC2-201ENST00000238633 SLC15A2Q16348 729 aa13.77□□□□□ -0.21
NPC2-201ENST00000238633 TXNRD1Q16881 649 aa13.77□□□□□ -0.21
NPC2-201ENST00000238633 AXIN2Q9Y2T1 843 aa13.77□□□□□ -0.21
NPC2-201ENST00000238633 RGPD3A6NKT7 1758 aaPredicted RBP13.76□□□□□ -0.21
NPC2-201ENST00000238633 RGPD4Q7Z3J3 1758 aa13.76□□□□□ -0.21
NPC2-201ENST00000238633 NLRP13Q86W25 1043 aa13.76□□□□□ -0.21
NPC2-201ENST00000238633 AATKQ6ZMQ8 1374 aa13.75□□□□□ -0.21
NPC2-201ENST00000238633 MTFR1LQ9H019 292 aa13.75□□□□□ -0.21
NPC2-201ENST00000238633 STK32BQ9NY57 414 aa13.75□□□□□ -0.21
NPC2-201ENST00000238633 ZBTB7CA1YPR0 619 aa13.74□□□□□ -0.21
NPC2-201ENST00000238633 LRRC37A3O60309 1634 aa13.74□□□□□ -0.21
NPC2-201ENST00000238633 TOPAZ1Q8N9V7 1692 aa13.73□□□□□ -0.21
NPC2-201ENST00000238633 TOM1L2Q6ZVM7 507 aa13.73□□□□□ -0.21
NPC2-201ENST00000238633 ARXQ96QS3 562 aa13.73□□□□□ -0.21
NPC2-201ENST00000238633 SBF2Q86WG5 1849 aa13.73□□□□□ -0.21
NPC2-201ENST00000238633 ITSN1Q15811 1721 aa13.73□□□□□ -0.21
NPC2-201ENST00000238633 ARHGEF28Q8N1W1 1705 aaKnown RBP13.72□□□□□ -0.21
NPC2-201ENST00000238633 MAP3K5Q99683 1374 aa13.71□□□□□ -0.21
NPC2-201ENST00000238633 WDR17Q8IZU2 1322 aa13.71□□□□□ -0.21
NPC2-201ENST00000238633 NLRP6P59044 892 aa13.71□□□□□ -0.21
NPC2-201ENST00000238633 STAC3Q96MF2 364 aa13.7□□□□□ -0.22
NPC2-201ENST00000238633 PPIP5K1Q6PFW1 1433 aa13.7□□□□□ -0.22
NPC2-201ENST00000238633 SLIT3O75094 1523 aa13.69□□□□□ -0.22
NPC2-201ENST00000238633 ARHGEF25Q86VW2 580 aa13.69□□□□□ -0.22
NPC2-201ENST00000238633 CDCA7Q9BWT1 371 aaPredicted RBP13.69□□□□□ -0.22
NPC2-201ENST00000238633 CARD10Q9BWT7 1032 aa13.69□□□□□ -0.22
NPC2-201ENST00000238633 CABP2Q9NPB3 220 aa13.69□□□□□ -0.22
NPC2-201ENST00000238633 CAPN15O75808 1086 aa13.68□□□□□ -0.22
NPC2-201ENST00000238633 ZNF827Q17R98 1081 aa13.68□□□□□ -0.22
NPC2-201ENST00000238633 BRD4O60885 1362 aaPredicted RBP13.68□□□□□ -0.22
NPC2-201ENST00000238633 COL18A1P39060 1754 aa13.68□□□□□ -0.22
NPC2-201ENST00000238633 GIGYF1O75420 1035 aaPredicted RBP13.67□□□□□ -0.22
NPC2-201ENST00000238633 GPR162Q16538 588 aa13.67□□□□□ -0.22
NPC2-201ENST00000238633 NBPF1Q3BBV0 1214 aa13.67□□□□□ -0.22
NPC2-201ENST00000238633 CABP1Q9NZU7 370 aa13.67□□□□□ -0.22
NPC2-201ENST00000238633 USP6P35125 1406 aa13.66□□□□□ -0.22
NPC2-201ENST00000238633 EXOC5O00471 708 aa13.66□□□□□ -0.22
NPC2-201ENST00000238633 SRPK2P78362 688 aaKnown RBP13.66□□□□□ -0.22
NPC2-201ENST00000238633 LRRC4BQ9NT99 713 aa13.66□□□□□ -0.22
NPC2-201ENST00000238633 RAB3GAP2Q9H2M9 1393 aa13.66□□□□□ -0.22
NPC2-201ENST00000238633 ACSBG1Q96GR2 724 aa13.65□□□□□ -0.22
NPC2-201ENST00000238633 ZNF219Q9P2Y4 722 aaPredicted RBP13.65□□□□□ -0.22
NPC2-201ENST00000238633 CPSF1Q10570 1443 aaKnown RBP13.64□□□□□ -0.23
NPC2-201ENST00000238633 PAPPAQ13219 1627 aa13.64□□□□□ -0.23
NPC2-201ENST00000238633 CHD4Q14839 1912 aa13.63□□□□□ -0.23
NPC2-201ENST00000238633 NLGN2Q8NFZ4 835 aa13.63□□□□□ -0.23
NPC2-201ENST00000238633 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
NPC2-201ENST00000238633 CSB-PGBD3P0DP91 1061 aa13.62□□□□□ -0.23
NPC2-201ENST00000238633 SOX12O15370 315 aa13.61□□□□□ -0.23
NPC2-201ENST00000238633 TNS2Q63HR2 1409 aa13.61□□□□□ -0.23
NPC2-201ENST00000238633 SHANK3Q9BYB0 1731 aa13.61□□□□□ -0.23
NPC2-201ENST00000238633 TTC21BQ7Z4L5 1316 aa13.61□□□□□ -0.23
NPC2-201ENST00000238633 CENPJQ9HC77 1338 aaPredicted RBP13.61□□□□□ -0.23
NPC2-201ENST00000238633 PIK3C2AO00443 1686 aa13.6□□□□□ -0.23
NPC2-201ENST00000238633 WNK3Q9BYP7 1800 aa13.6□□□□□ -0.23
NPC2-201ENST00000238633 YBX3P16989 372 aaKnown RBP eCLIP13.6□□□□□ -0.233e-8■■■□□ 18.3
NPC2-201ENST00000238633 PELP1Q8IZL8 1130 aaKnown RBP13.6□□□□□ -0.23
NPC2-201ENST00000238633 CCDC7Q96M83 1385 aa13.59□□□□□ -0.23
NPC2-201ENST00000238633 KLHL34Q8N239 644 aa13.59□□□□□ -0.23
NPC2-201ENST00000238633 PNPLA7Q6ZV29 1317 aa13.59□□□□□ -0.23
NPC2-201ENST00000238633 KCNH5Q8NCM2 988 aa13.58□□□□□ -0.24
NPC2-201ENST00000238633 SLC16A10Q8TF71 515 aa13.58□□□□□ -0.24
NPC2-201ENST00000238633 NFAT5O94916 1531 aa13.58□□□□□ -0.24
NPC2-201ENST00000238633 TRPM1Q7Z4N2 1603 aa13.57□□□□□ -0.24
NPC2-201ENST00000238633 NHSQ6T4R5 1651 aa13.57□□□□□ -0.24
NPC2-201ENST00000238633 KCNQ4P56696 695 aa13.57□□□□□ -0.24
NPC2-201ENST00000238633 AKAP12Q02952 1782 aa13.57□□□□□ -0.24
NPC2-201ENST00000238633 POLD1P28340 1107 aa13.56□□□□□ -0.24
NPC2-201ENST00000238633 ABCC6O95255 1503 aa13.55□□□□□ -0.24
NPC2-201ENST00000238633 IL2RBP14784 551 aa13.54□□□□□ -0.24
NPC2-201ENST00000238633 SLC27A3Q5K4L6 730 aa13.54□□□□□ -0.24
NPC2-201ENST00000238633 ZNF692Q9BU19 519 aaPredicted RBP13.54□□□□□ -0.24
NPC2-201ENST00000238633 NLRP2Q9NX02 1062 aa13.54□□□□□ -0.24
NPC2-201ENST00000238633 ERBB3P21860 1342 aa13.54□□□□□ -0.24
NPC2-201ENST00000238633 ATP10DQ9P241 1426 aa13.54□□□□□ -0.24
NPC2-201ENST00000238633 RGPD5Q99666 1765 aa13.53□□□□□ -0.24
NPC2-201ENST00000238633 GRIN3BO60391 1043 aa13.53□□□□□ -0.24
NPC2-201ENST00000238633 DSG3P32926 999 aa13.53□□□□□ -0.24
NPC2-201ENST00000238633 TFCP2L1Q9NZI6 479 aa13.53□□□□□ -0.24
NPC2-201ENST00000238633 TTC21AQ8NDW8 1320 aa13.53□□□□□ -0.24
NPC2-201ENST00000238633 COL24A1Q17RW2 1714 aa13.53□□□□□ -0.24
NPC2-201ENST00000238633 KIAA1210Q9ULL0 1709 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms