RNA–Protein interactions for RNA: ENST00000222266.2

PSENEN-201, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 603 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-201ENST00000222266 THRAP3Q9Y2W1 955 aaKnown RBP13.75□□□□□ -0.21
PSENEN-201ENST00000222266 PHRF1Q9P1Y6 1649 aaKnown RBP13.75□□□□□ -0.21
PSENEN-201ENST00000222266 ABCC6O95255 1503 aa13.74□□□□□ -0.21
PSENEN-201ENST00000222266 A0A0G2JS52 829 aa13.74□□□□□ -0.21
PSENEN-201ENST00000222266 MYT1Q01538 1121 aa13.74□□□□□ -0.21
PSENEN-201ENST00000222266 RRS1Q15050 365 aaKnown RBP13.74□□□□□ -0.21
PSENEN-201ENST00000222266 GJD4Q96KN9 370 aaPredicted RBP13.74□□□□□ -0.21
PSENEN-201ENST00000222266 SLIT2O94813 1529 aa13.74□□□□□ -0.21
PSENEN-201ENST00000222266 KIF20BQ96Q89 1820 aa13.74□□□□□ -0.21
PSENEN-201ENST00000222266 USP54Q70EL1 1684 aa13.73□□□□□ -0.21
PSENEN-201ENST00000222266 HOXC9P31274 260 aa13.73□□□□□ -0.21
PSENEN-201ENST00000222266 ANKRD24Q8TF21 1146 aa13.73□□□□□ -0.21
PSENEN-201ENST00000222266 CDCA7Q9BWT1 371 aaPredicted RBP13.73□□□□□ -0.21
PSENEN-201ENST00000222266 NLRP2Q9NX02 1062 aa13.73□□□□□ -0.21
PSENEN-201ENST00000222266 WDR17Q8IZU2 1322 aa13.72□□□□□ -0.21
PSENEN-201ENST00000222266 POLKQ9UBT6 870 aa13.72□□□□□ -0.21
PSENEN-201ENST00000222266 NFAT5O94916 1531 aa13.72□□□□□ -0.21
PSENEN-201ENST00000222266 INSRP06213 1382 aa13.71□□□□□ -0.21
PSENEN-201ENST00000222266 ABCA3Q99758 1704 aa13.71□□□□□ -0.21
PSENEN-201ENST00000222266 MARF1Q9Y4F3 1742 aaKnown RBP13.71□□□□□ -0.21
PSENEN-201ENST00000222266 ANP32CO43423 234 aa13.71□□□□□ -0.21
PSENEN-201ENST00000222266 TCP11L2Q8N4U5 519 aa13.71□□□□□ -0.21
PSENEN-201ENST00000222266 LTV1Q96GA3 475 aaPredicted RBP13.71□□□□□ -0.21
PSENEN-201ENST00000222266 CARD10Q9BWT7 1032 aa13.71□□□□□ -0.21
PSENEN-201ENST00000222266 NUDCQ9Y266 331 aa13.71□□□□□ -0.21
PSENEN-201ENST00000222266 BCL9LQ86UU0 1499 aa13.71□□□□□ -0.21
PSENEN-201ENST00000222266 NWD2Q9ULI1 1742 aa13.7□□□□□ -0.22
PSENEN-201ENST00000222266 ERBB3P21860 1342 aa13.7□□□□□ -0.22
PSENEN-201ENST00000222266 USP35Q9P2H5 1018 aa13.7□□□□□ -0.22
PSENEN-201ENST00000222266 AXIN2Q9Y2T1 843 aa13.7□□□□□ -0.22
PSENEN-201ENST00000222266 EMILIN1Q9Y6C2 1016 aa13.7□□□□□ -0.22
PSENEN-201ENST00000222266 CRB1P82279 1406 aa13.7□□□□□ -0.22
PSENEN-201ENST00000222266 SPATA31A5Q5VU36 1347 aa13.69□□□□□ -0.22
PSENEN-201ENST00000222266 SPATA31A7Q8IWB4 1347 aa13.69□□□□□ -0.22
PSENEN-201ENST00000222266 MTHFSP49914 203 aa13.69□□□□□ -0.22
PSENEN-201ENST00000222266 LARP1Q6PKG0 1096 aaKnown RBP13.69□□□□□ -0.22
PSENEN-201ENST00000222266 ATRNO75882 1429 aa13.69□□□□□ -0.22
PSENEN-201ENST00000222266 CRYBG1Q9Y4K1 1723 aa13.69□□□□□ -0.22
PSENEN-201ENST00000222266 COL5A2P05997 1499 aaPredicted RBP13.68□□□□□ -0.22
PSENEN-201ENST00000222266 SPATA31A1Q5TZJ5 1347 aa13.68□□□□□ -0.22
PSENEN-201ENST00000222266 HSP90AB2PQ58FF8 381 aa13.68□□□□□ -0.22
PSENEN-201ENST00000222266 BARGINQ6ZT62 677 aa13.68□□□□□ -0.22
PSENEN-201ENST00000222266 CAMTA1Q9Y6Y1 1673 aa13.67□□□□□ -0.22
PSENEN-201ENST00000222266 FBLN1P23142 703 aa13.67□□□□□ -0.22
PSENEN-201ENST00000222266 POTEAQ6S8J7 498 aa13.67□□□□□ -0.22
PSENEN-201ENST00000222266 RAPGEF4Q8WZA2 1011 aa13.67□□□□□ -0.22
PSENEN-201ENST00000222266 RGS17Q9UGC6 210 aaPredicted RBP13.67□□□□□ -0.22
PSENEN-201ENST00000222266 ANKRD26Q9UPS8 1709 aa13.67□□□□□ -0.22
PSENEN-201ENST00000222266 DIAPH1O60610 1272 aaKnown RBP13.66□□□□□ -0.22
PSENEN-201ENST00000222266 NEFMP07197 916 aa13.66□□□□□ -0.22
PSENEN-201ENST00000222266 PDE3BQ13370 1112 aa13.66□□□□□ -0.22
PSENEN-201ENST00000222266 FAM98CQ17RN3 349 aaKnown RBP13.66□□□□□ -0.22
PSENEN-201ENST00000222266 PLCH1Q4KWH8 1693 aa13.66□□□□□ -0.22
PSENEN-201ENST00000222266 MYBBP1AQ9BQG0 1328 aaKnown RBP13.65□□□□□ -0.22
PSENEN-201ENST00000222266 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.65□□□□□ -0.22
PSENEN-201ENST00000222266 EXOC5O00471 708 aa13.65□□□□□ -0.22
PSENEN-201ENST00000222266 PPP2R1AP30153 589 aa13.65□□□□□ -0.22
PSENEN-201ENST00000222266 PNNQ9H307 717 aaKnown RBP13.65□□□□□ -0.22
PSENEN-201ENST00000222266 CDK12Q9NYV4 1490 aaPredicted RBP13.64□□□□□ -0.23
PSENEN-201ENST00000222266 PARD3Q8TEW0 1356 aa13.64□□□□□ -0.23
PSENEN-201ENST00000222266 ONECUT3O60422 494 aaPredicted RBP13.64□□□□□ -0.23
PSENEN-201ENST00000222266 IL2RBP14784 551 aa13.64□□□□□ -0.23
PSENEN-201ENST00000222266 TATP17735 454 aaPredicted RBP13.64□□□□□ -0.23
PSENEN-201ENST00000222266 LMO7Q8WWI1 1683 aa13.63□□□□□ -0.23
PSENEN-201ENST00000222266 DDB1Q16531 1140 aa13.63□□□□□ -0.23
PSENEN-201ENST00000222266 SEPT12Q8IYM1 358 aa13.63□□□□□ -0.23
PSENEN-201ENST00000222266 PRKRIP1Q9H875 184 aaPredicted RBP13.63□□□□□ -0.23
PSENEN-201ENST00000222266 LTN1O94822 1766 aa13.63□□□□□ -0.23
PSENEN-201ENST00000222266 EIF4A2Q14240 407 aaKnown RBP13.62□□□□□ -0.23
PSENEN-201ENST00000222266 U2SURPO15042 1029 aaKnown RBP13.61□□□□□ -0.23
PSENEN-201ENST00000222266 SPG7Q9UQ90 795 aa13.61□□□□□ -0.23
PSENEN-201ENST00000222266 NBPF6Q5VWK0 638 aa13.6□□□□□ -0.23
PSENEN-201ENST00000222266 KRT27Q7Z3Y8 459 aa13.6□□□□□ -0.23
PSENEN-201ENST00000222266 NBPF4Q96M43 638 aa13.6□□□□□ -0.23
PSENEN-201ENST00000222266 COL18A1P39060 1754 aa13.59□□□□□ -0.23
PSENEN-201ENST00000222266 WDR43Q15061 677 aaKnown RBP eCLIP13.59□□□□□ -0.23
PSENEN-201ENST00000222266 AMOTQ4VCS5 1084 aa13.59□□□□□ -0.23
PSENEN-201ENST00000222266 EYA1Q99502 592 aa13.59□□□□□ -0.23
PSENEN-201ENST00000222266 MAP2P11137 1827 aaKnown RBP13.59□□□□□ -0.23
PSENEN-201ENST00000222266 FAM208AQ9UK61 1670 aaKnown RBP13.59□□□□□ -0.23
PSENEN-201ENST00000222266 PLEKHG2Q9H7P9 1386 aa13.58□□□□□ -0.23
PSENEN-201ENST00000222266 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.24
PSENEN-201ENST00000222266 IL13P35225 146 aa13.58□□□□□ -0.24
PSENEN-201ENST00000222266 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.24
PSENEN-201ENST00000222266 PLEKHO1Q53GL0 409 aaPredicted RBP13.58□□□□□ -0.24
PSENEN-201ENST00000222266 ZCRB1Q8TBF4 217 aaKnown RBP13.58□□□□□ -0.24
PSENEN-201ENST00000222266 NRAPQ86VF7 1730 aa13.58□□□□□ -0.24
PSENEN-201ENST00000222266 SF3B2Q13435 895 aaKnown RBP13.57□□□□□ -0.24
PSENEN-201ENST00000222266 SULT6B1Q6IMI4 303 aa13.57□□□□□ -0.24
PSENEN-201ENST00000222266 FAM196AQ6ZSG2 479 aa13.57□□□□□ -0.24
PSENEN-201ENST00000222266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.57□□□□□ -0.24
PSENEN-201ENST00000222266 IGSF1Q8N6C5 1336 aa13.57□□□□□ -0.24
PSENEN-201ENST00000222266 DIEXFQ68CQ4 756 aaKnown RBP13.56□□□□□ -0.24
PSENEN-201ENST00000222266 USHBP1Q8N6Y0 703 aa13.56□□□□□ -0.24
PSENEN-201ENST00000222266 FCHSD2O94868 740 aa13.55□□□□□ -0.24
PSENEN-201ENST00000222266 HSP90AB1P08238 724 aaKnown RBP13.55□□□□□ -0.24
PSENEN-201ENST00000222266 CCDC125Q86Z20 511 aa13.55□□□□□ -0.24
PSENEN-201ENST00000222266 PCDH11XQ9BZA7 1347 aa13.55□□□□□ -0.24
PSENEN-201ENST00000222266 PCDH11YQ9BZA8 1340 aa13.55□□□□□ -0.24
PSENEN-201ENST00000222266 C1orf141Q5JVX7 400 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms