RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 SPIRE2Q8WWL2 714 aa11.42□□□□□ -0.58
VSIG1-201ENST00000217957 UHRF1BP1LA0JNW5 1464 aa11.42□□□□□ -0.58
VSIG1-201ENST00000217957 PHLDB1Q86UU1 1377 aa11.42□□□□□ -0.58
VSIG1-201ENST00000217957 NUTM2BA6NNL0 878 aaPredicted RBP11.42□□□□□ -0.58
VSIG1-201ENST00000217957 NUTM2EB1AL46 878 aaPredicted RBP11.42□□□□□ -0.58
VSIG1-201ENST00000217957 VAMP1P23763 118 aa11.42□□□□□ -0.58
VSIG1-201ENST00000217957 NUTM2DQ5VT03 806 aaPredicted RBP11.42□□□□□ -0.58
VSIG1-201ENST00000217957 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
VSIG1-201ENST00000217957 ABCA5Q8WWZ7 1642 aa11.42□□□□□ -0.58
VSIG1-201ENST00000217957 PCF11O94913 1555 aaKnown RBP11.41□□□□□ -0.58
VSIG1-201ENST00000217957 DSG3P32926 999 aa11.41□□□□□ -0.58
VSIG1-201ENST00000217957 FMNL3Q8IVF7 1028 aa11.41□□□□□ -0.58
VSIG1-201ENST00000217957 FAM69CQ0P6D2 419 aa11.41□□□□□ -0.58
VSIG1-201ENST00000217957 RAVER1Q8IY67 606 aaKnown RBP11.41□□□□□ -0.58
VSIG1-201ENST00000217957 PCGF6Q9BYE7 350 aa11.41□□□□□ -0.58
VSIG1-201ENST00000217957 IRF2BPLQ9H1B7 796 aa11.41□□□□□ -0.58
VSIG1-201ENST00000217957 PRM3Q9NNZ6 103 aa11.41□□□□□ -0.58
VSIG1-201ENST00000217957 IFT57Q9NWB7 429 aa11.41□□□□□ -0.58
VSIG1-201ENST00000217957 NOP58Q9Y2X3 529 aaKnown RBP11.41□□□□□ -0.58
VSIG1-201ENST00000217957 HOXA2O43364 376 aa11.4□□□□□ -0.58
VSIG1-201ENST00000217957 RBM33Q96EV2 1170 aaKnown RBP11.4□□□□□ -0.58
VSIG1-201ENST00000217957 METTL14Q9HCE5 456 aaKnown RBP11.4□□□□□ -0.58
VSIG1-201ENST00000217957 TBX4P57082 545 aa11.4□□□□□ -0.58
VSIG1-201ENST00000217957 TMEM87AQ8NBN3 555 aa11.4□□□□□ -0.58
VSIG1-201ENST00000217957 RPS6KL1Q9Y6S9 549 aa11.4□□□□□ -0.58
VSIG1-201ENST00000217957 ENOX2Q16206 610 aaKnown RBP11.4□□□□□ -0.59
VSIG1-201ENST00000217957 GAS2L2Q8NHY3 880 aa11.4□□□□□ -0.59
VSIG1-201ENST00000217957 GRIN2BQ13224 1484 aa11.4□□□□□ -0.59
VSIG1-201ENST00000217957 CHADLQ6NUI6 762 aa11.39□□□□□ -0.59
VSIG1-201ENST00000217957 CFAP43Q8NDM7 1665 aa11.39□□□□□ -0.59
VSIG1-201ENST00000217957 ATP2B4P23634 1241 aa11.39□□□□□ -0.59
VSIG1-201ENST00000217957 PLEKHG6Q3KR16 790 aa11.39□□□□□ -0.59
VSIG1-201ENST00000217957 CAPN12Q6ZSI9 719 aa11.39□□□□□ -0.59
VSIG1-201ENST00000217957 JDP2Q8WYK2 163 aa11.39□□□□□ -0.59
VSIG1-201ENST00000217957 CEP170Q5SW79 1584 aa11.38□□□□□ -0.59
VSIG1-201ENST00000217957 MAP3K13O43283 966 aa11.38□□□□□ -0.59
VSIG1-201ENST00000217957 CBLBQ13191 982 aa11.38□□□□□ -0.59
VSIG1-201ENST00000217957 TSR2Q969E8 191 aaKnown RBP11.38□□□□□ -0.59
VSIG1-201ENST00000217957 CCDC189A1A4V9 331 aa11.38□□□□□ -0.59
VSIG1-201ENST00000217957 SCAMP3O14828 347 aaKnown RBP11.37□□□□□ -0.59
VSIG1-201ENST00000217957 PLPP6Q8IY26 295 aa11.37□□□□□ -0.59
VSIG1-201ENST00000217957 PCDH12Q9NPG4 1184 aa11.37□□□□□ -0.59
VSIG1-201ENST00000217957 PRMT3O60678 531 aa11.37□□□□□ -0.59
VSIG1-201ENST00000217957 SOGA1O94964 1423 aa11.37□□□□□ -0.59
VSIG1-201ENST00000217957 IBSPP21815 317 aaPredicted RBP11.37□□□□□ -0.59
VSIG1-201ENST00000217957 LMOD3Q0VAK6 560 aa11.37□□□□□ -0.59
VSIG1-201ENST00000217957 MRPL58Q14197 206 aaKnown RBP11.37□□□□□ -0.59
VSIG1-201ENST00000217957 ZNF594Q96JF6 807 aaPredicted RBP11.37□□□□□ -0.59
VSIG1-201ENST00000217957 C11orf96Q7Z7L8 435 aa11.36□□□□□ -0.59
VSIG1-201ENST00000217957 SMC5Q8IY18 1101 aa11.36□□□□□ -0.59
VSIG1-201ENST00000217957 ZNF579Q8NAF0 562 aaKnown RBP11.36□□□□□ -0.59
VSIG1-201ENST00000217957 MKNK1Q9BUB5 465 aa11.36□□□□□ -0.59
VSIG1-201ENST00000217957 ATP9BO43861 1147 aa11.35□□□□□ -0.59
VSIG1-201ENST00000217957 WASHC4Q2M389 1173 aa11.35□□□□□ -0.59
VSIG1-201ENST00000217957 RSBN1LQ6PCB5 846 aaPredicted RBP11.35□□□□□ -0.59
VSIG1-201ENST00000217957 SETDB2Q96T68 719 aa11.35□□□□□ -0.59
VSIG1-201ENST00000217957 HLA-CQ95604 372 aa11.35□□□□□ -0.59
VSIG1-201ENST00000217957 EPRSP07814 1512 aaKnown RBP11.35□□□□□ -0.59
VSIG1-201ENST00000217957 AAMPQ13685 434 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 HSP90AB2PQ58FF8 381 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 RPS6KC1Q96S38 1066 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 RUSC2Q8N2Y8 1516 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 APLP1P51693 650 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 EVA1CP58658 441 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 LONRF3Q496Y0 759 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 TSHZ1Q6ZSZ6 1077 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 USP17L3A6NCW0 530 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 USP17L4A6NCW7 530 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 MAP3K7O43318 606 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 S100BP04271 92 aaPredicted RBP11.34□□□□□ -0.59
VSIG1-201ENST00000217957 P4HBP07237 508 aaKnown RBP11.34□□□□□ -0.59
VSIG1-201ENST00000217957 RHBDL3P58872 404 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 ZNF394Q53GI3 561 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 USP17L2Q6R6M4 530 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 USP17L1Q7RTZ2 530 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 CCSER2Q9H7U1 834 aa11.34□□□□□ -0.59
VSIG1-201ENST00000217957 SEMA3FQ13275 785 aa11.33□□□□□ -0.6
VSIG1-201ENST00000217957 KCNH2Q12809 1159 aa11.33□□□□□ -0.6
VSIG1-201ENST00000217957 GLYCTKQ8IVS8 523 aa11.33□□□□□ -0.6
VSIG1-201ENST00000217957 WDHD1O75717 1129 aaPredicted RBP11.32□□□□□ -0.6
VSIG1-201ENST00000217957 FANCCQ00597 558 aa11.32□□□□□ -0.6
VSIG1-201ENST00000217957 BIRC2Q13490 618 aa11.32□□□□□ -0.6
VSIG1-201ENST00000217957 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
VSIG1-201ENST00000217957 GUCA2AQ02747 115 aa11.31□□□□□ -0.6
VSIG1-201ENST00000217957 MPHOSPH6Q99547 160 aaKnown RBP11.31□□□□□ -0.6
VSIG1-201ENST00000217957 CUEDC1Q9NWM3 386 aaPredicted RBP11.31□□□□□ -0.6
VSIG1-201ENST00000217957 LILRB3O75022 631 aa11.31□□□□□ -0.6
VSIG1-201ENST00000217957 EAPPQ56P03 285 aaPredicted RBP11.31□□□□□ -0.6
VSIG1-201ENST00000217957 SEPT3Q9UH03 358 aa11.31□□□□□ -0.6
VSIG1-201ENST00000217957 USP17L15C9J2P7 530 aa11.31□□□□□ -0.6
VSIG1-201ENST00000217957 USP17L10C9JJH3 530 aa11.31□□□□□ -0.6
VSIG1-201ENST00000217957 USP17L13C9JLJ4 530 aa11.31□□□□□ -0.6
VSIG1-201ENST00000217957 USP17L12C9JPN9 530 aa11.31□□□□□ -0.6
VSIG1-201ENST00000217957 USP17L11C9JVI0 530 aa11.31□□□□□ -0.6
VSIG1-201ENST00000217957 USP17L21D6R901 530 aa11.31□□□□□ -0.6
VSIG1-201ENST00000217957 USP17L18D6R9N7 530 aa11.31□□□□□ -0.6
VSIG1-201ENST00000217957 USP17L22D6RA61 530 aa11.31□□□□□ -0.6
VSIG1-201ENST00000217957 USP17L17D6RBQ6 530 aa11.31□□□□□ -0.6
VSIG1-201ENST00000217957 USP17L19D6RCP7 530 aa11.31□□□□□ -0.6
VSIG1-201ENST00000217957 USP17L20D6RJB6 530 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms