RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 CenpqQ9CPQ5 267 aa20.27■□□□□ 0.84
Ptpre-207ENSMUST00000211140 Pdia4P08003 638 aaKnown RBP20.27■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Stim1P70302 685 aa20.27■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Ppp6r1Q7TSI3 856 aa20.27■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Eif5P59325 429 aaKnown RBP20.26■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Kif20aP97329 887 aa20.26■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Atf3Q60765 181 aa20.26■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Ppip5k2Q6ZQB6 1129 aa20.25■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Larp1Q6ZQ58 1072 aaKnown RBP20.25■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Arap1Q4LDD4 1452 aa20.25■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Secisbp2lQ6A098 1086 aaKnown RBP20.25■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Ptpdc1Q6NZK8 747 aa20.25■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Slu7Q8BHJ9 585 aa20.25■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Pabpn1Q8CCS6 302 aaKnown RBP20.25■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Otud6bQ8K2H2 294 aa20.25■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Luc7lQ9CYI4 371 aaKnown RBP20.25■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Maco1Q7TQE6 664 aaKnown RBP20.25■□□□□ 0.83
Ptpre-207ENSMUST00000211140 PalmQ9Z0P4 383 aa20.25■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Trim55G3X8Y1 545 aa20.24■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Cdk19Q8BWD8 501 aa20.24■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Erich4Q3UNU4 136 aa20.23■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Cpa2Q504N0 417 aa20.23■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Gnl2Q99LH1 728 aaKnown RBP20.23■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Ggnbp2Q5SV77 696 aa20.23■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Tspyl2Q7TQI8 677 aa20.23■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Exoc6bA6H5Z3 810 aa20.23■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Iqgap2Q3UQ44 1575 aa20.23■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Ppm1eQ80TL0 749 aa20.22■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Ccdc181Q80ZU5 509 aa20.22■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Dennd6aQ8BH65 605 aa20.22■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Fchsd2Q3USJ8 740 aa20.22■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Rbm5Q91YE7 815 aaKnown RBP20.21■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Map3k13Q1HKZ5 959 aa20.21■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Cdkl5Q3UTQ8 938 aa20.21■□□□□ 0.83
Ptpre-207ENSMUST00000211140 Spag5Q7TME2 1165 aa20.21■□□□□ 0.83
Ptpre-207ENSMUST00000211140 L3mbtl2P59178 703 aa20.2■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Dnaaf4Q8R368 420 aa20.2■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.2■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Hoxa7P02830 229 aa20.2■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Pms1Q8K119 917 aa20.2■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Themis2Q91YX0 663 aa20.2■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Map9Q3TRR0 646 aa20.19■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Arhgap31A6X8Z5 1425 aa20.19■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Spty2d1Q68FG3 682 aa20.19■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Fsd2Q8BZ52 692 aa20.19■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Gbp4Q61107 620 aa20.18■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Cyp26c1B2RXA7 518 aa20.18■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Ercc6lQ8BHK9 1240 aa20.18■□□□□ 0.82
Ptpre-207ENSMUST00000211140 PrxO55103 1391 aa20.18■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Irgm2A0A140LIF8 407 aa20.18■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Zscan20B2KFW1 1030 aa20.18■□□□□ 0.82
Ptpre-207ENSMUST00000211140 NcapgE9PWG6 1004 aa20.18■□□□□ 0.82
Ptpre-207ENSMUST00000211140 MicalclQ9D5U9 680 aa20.18■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Cfap45Q9D9U9 551 aa20.18■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Jakmip2D3YXK0 820 aa20.17■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Dnajc2P54103 621 aaKnown RBP20.17■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Znf692Q3U381 531 aa20.17■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Rufy2Q8R4C2 606 aa20.17■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Lrrc45Q8CIM1 670 aa20.17■□□□□ 0.82
Ptpre-207ENSMUST00000211140 IkQ9Z1M8 557 aaKnown RBP20.17■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Wdr33Q8K4P0 1330 aaKnown RBP20.17■□□□□ 0.82
Ptpre-207ENSMUST00000211140 TxlnbQ8VBT1 685 aa20.16■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Bcl11bQ99PV8 884 aa20.16■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Pof1bQ8K4L4 587 aa20.16■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Fam13aQ8BGI4 693 aa20.15■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Krt84Q99M73 603 aa20.15■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Adck5Q80V03 582 aa20.15■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Brf1Q8CFK2 676 aa20.15■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Ttc19Q8CC21 365 aa20.15■□□□□ 0.82
Ptpre-207ENSMUST00000211140 ImpactO55091 318 aa20.15■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Trim25Q61510 634 aaKnown RBP20.15■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Fam43aQ8BUP8 424 aa20.15■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Mcm4P49717 862 aa20.14■□□□□ 0.82
Ptpre-207ENSMUST00000211140 Pafah1b1P63005 410 aaKnown RBP20.14■□□□□ 0.82
Ptpre-207ENSMUST00000211140 IbtkQ6ZPR6 1352 aaKnown RBP20.14■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Cbx1P83917 185 aaKnown RBP20.14■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Rnf187Q8BFX1 236 aa20.14■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Iqca1Q9CUL5 857 aa20.14■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Lmbr1Q9JIT0 490 aa20.14■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Kdm4aQ8BW72 1064 aa20.13■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Smc5Q8CG46 1101 aaKnown RBP20.13■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Aldh1l1Q8R0Y6 902 aa20.13■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Gm7298A0A0N4SVU1 1476 aa20.13■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Smarca5Q91ZW3 1051 aaKnown RBP20.13■□□□□ 0.81
Ptpre-207ENSMUST00000211140 ImmtQ8CAQ8 757 aaKnown RBP20.13■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Gigyf1Q99MR1 1044 aaKnown RBP20.13■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Rcan3Q9JKK0 239 aa20.12■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Tiam1Q60610 1591 aa20.12■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Gm21698A0A087WQP8 267 aa20.12■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Gm21671G3UY31 267 aa20.12■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Cavin1O54724 392 aa20.12■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Gsdma2Q32M21 443 aa20.12■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Gm7361D3Z6R1 267 aa20.12■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Ccdc39Q9D5Y1 937 aa20.12■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Trim34bJ3QNR8 485 aa20.12■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Gjb2Q00977 226 aa20.12■□□□□ 0.81
Ptpre-207ENSMUST00000211140 SrrtQ99MR6 875 aaKnown RBP20.11■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Il16O54824 1322 aa20.11■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Wasf1Q8R5H6 559 aa20.11■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Wwc1Q5SXA9 1104 aa20.1■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 101 ms