RNA–Protein interactions for RNA: ENSMUST00000163419.7

Scaf4-202, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Scaf4, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-202ENSMUST00000163419 Zkscan2G3X952 960 aa13.97□□□□□ -0.17
Scaf4-202ENSMUST00000163419 Cetn4Q8K4K1 168 aa13.97□□□□□ -0.17
Scaf4-202ENSMUST00000163419 Ipo9Q91YE6 1041 aa13.97□□□□□ -0.17
Scaf4-202ENSMUST00000163419 Frmpd2A0A140LI67 1392 aa13.97□□□□□ -0.17
Scaf4-202ENSMUST00000163419 VgfQ0VGU4 617 aa13.97□□□□□ -0.17
Scaf4-202ENSMUST00000163419 Gcc2Q8CHG3 1679 aa13.96□□□□□ -0.17
Scaf4-202ENSMUST00000163419 Ppp1r15aP17564 657 aa13.96□□□□□ -0.17
Scaf4-202ENSMUST00000163419 KinQ8K339 391 aa13.96□□□□□ -0.17
Scaf4-202ENSMUST00000163419 Gprasp1Q5U4C1 1347 aa13.96□□□□□ -0.17
Scaf4-202ENSMUST00000163419 Mad1l1Q9WTX8 717 aaKnown RBP13.96□□□□□ -0.17
Scaf4-202ENSMUST00000163419 Rsph3aQ3UFY4 516 aa13.96□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Dnajc10Q9DC23 793 aa13.96□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Casq1O09165 405 aa13.95□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Cdca7Q9D0M2 382 aa13.95□□□□□ -0.18
Scaf4-202ENSMUST00000163419 AI481877A2ALV5 1481 aa13.95□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Soga3Q6NZL0 945 aa13.95□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Cfap69Q8BH53 942 aa13.95□□□□□ -0.18
Scaf4-202ENSMUST00000163419 OptnQ8K3K8 584 aa13.95□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Babam1Q3UI43 333 aa13.94□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Setbp1Q9Z180 1582 aa13.94□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Ccdc43Q9CR29 222 aaKnown RBP13.94□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Fam135aQ6NS59 1506 aa13.94□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Abca5Q8K448 1642 aa13.94□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Gpatch11Q3UFS4 262 aa13.94□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Ccnl1Q52KE7 532 aaKnown RBP13.94□□□□□ -0.18
Scaf4-202ENSMUST00000163419 GpkowQ56A08 488 aa13.94□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Abcc1O35379 1528 aa13.94□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Rbm26Q6NZN0 1012 aaKnown RBP13.93□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Ifit1bl2Q3U687 466 aa13.93□□□□□ -0.18
Scaf4-202ENSMUST00000163419 SfswapQ3USH5 945 aaKnown RBP13.93□□□□□ -0.18
Scaf4-202ENSMUST00000163419 PogkQ80TC5 607 aa13.93□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Gtf3c3Q3TMP1 882 aa13.93□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Jakmip1Q8BVL9 626 aa13.93□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Odf2lQ9D478 642 aa13.93□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Nip7Q9CXK8 180 aaKnown RBP13.93□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Znf697Q569E7 569 aa13.92□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Rec8Q8C5S7 591 aa13.92□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Chpf2Q3UU43 768 aa13.92□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Liat1Q810M6 228 aa13.92□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Hnrnpul1Q8VDM6 859 aaKnown RBP13.92□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Sel1lQ9Z2G6 790 aa13.92□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Ltv1Q6NSQ7 470 aaKnown RBP13.92□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Maco1Q7TQE6 664 aaKnown RBP13.92□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Qtrt2B8ZXI1 415 aa13.91□□□□□ -0.18
Scaf4-202ENSMUST00000163419 GptQ8QZR5 496 aa13.91□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Rfx7F8VPJ6 1459 aa13.91□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Eif3aP23116 1344 aaKnown RBP13.91□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Ncbp3Q8BZR9 615 aaKnown RBP13.91□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Pde4dQ01063 747 aa13.91□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Igflr1Q3U4N7 345 aa13.91□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Slc26a8Q8R0C3 999 aa13.91□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Ppip5k1A2ARP1 1436 aa13.91□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Smarcc1P97496 1104 aa13.9□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Egfem1Q8C088 590 aa13.9□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Trim29Q8R2Q0 587 aa13.9□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Ttll13A4Q9F6 804 aa13.9□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Tnni2P13412 182 aa13.9□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Gsdma2Q32M21 443 aa13.9□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Ddb1Q3U1J4 1140 aaKnown RBP13.9□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Srek1Q8BZX4 494 aaKnown RBP13.9□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Txnrd1Q9JMH6 613 aa13.9□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Naip7Q9JIB3 1402 aa13.9□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Naip6Q9JIB6 1403 aa13.9□□□□□ -0.18
Scaf4-202ENSMUST00000163419 Myd88P22366 296 aa13.9□□□□□ -0.19
Scaf4-202ENSMUST00000163419 March6Q6ZQ89 909 aa13.9□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Shroom2A2ALU4 1481 aa13.89□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Ccdc183A2AJB1 534 aa13.89□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Cog6Q8R3I3 657 aa13.89□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Slain2Q8CI08 581 aa13.89□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Emilin2Q8K482 1074 aa13.89□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Cfap99A0A140LIX9 648 aa13.89□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Plekhm2Q80TQ5 1018 aa13.89□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Prkrip1Q9CWV6 186 aaKnown RBP13.89□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Ttc5Q99LG4 440 aa13.88□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Pla2r1Q62028 1487 aa13.88□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Atp7aQ64430 1491 aa13.88□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Klhdc4Q921I2 584 aa13.88□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Tbc1d7Q9D0K0 293 aa13.88□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Odf2A3KGV1 830 aaKnown RBP13.88□□□□□ -0.19
Scaf4-202ENSMUST00000163419 BC005561E9Q5E2 1589 aa13.87□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Gabpb2P81069 414 aa13.87□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Mcm2P97310 904 aa13.87□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Ddx17Q501J6 650 aaKnown RBP13.87□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Q9D9S1 216 aa13.87□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Utp3Q9JI13 469 aaKnown RBP13.87□□□□□ -0.19
Scaf4-202ENSMUST00000163419 NinlQ6ZQ12 1394 aa13.87□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Adam1bQ8R534 806 aa13.87□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Rai14Q9EP71 979 aaKnown RBP13.87□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Znf518aB2RRF6 1478 aaKnown RBP13.87□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Prkar2bP31324 416 aa13.86□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Psma5Q9Z2U1 241 aaKnown RBP13.86□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Ncoa1P70365 1447 aa13.86□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Tpm3P21107 285 aaKnown RBP13.86□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Paf1Q8K2T8 535 aa13.86□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Smarca5Q91ZW3 1051 aaKnown RBP13.86□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Wdr7Q920I9 1489 aa13.86□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Polr3aB2RXC6 1390 aa13.86□□□□□ -0.19
Scaf4-202ENSMUST00000163419 MpndQ3TV65 487 aa13.86□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Tspyl2Q7TQI8 677 aa13.86□□□□□ -0.19
Scaf4-202ENSMUST00000163419 Kif20aP97329 887 aa13.85□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 69.9 ms