RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Bag1Q60739 355 aa18.39■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Cdkl5Q3UTQ8 938 aa18.39■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 SrrtQ99MR6 875 aaKnown RBP18.39■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Gm1043A0A140LJC2 1431 aa18.39■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Nol8Q3UHX0 1147 aaKnown RBP18.38■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Babam1Q3UI43 333 aa18.38■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 TkfcQ8VC30 578 aa18.38■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Polr3aB2RXC6 1390 aa18.38■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Ptpdc1Q6NZK8 747 aa18.38■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Ercc6lQ8BHK9 1240 aa18.38■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Mctp1E9PV86 951 aa18.37■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Luc7lQ9CYI4 371 aaKnown RBP18.37■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Stim1P70302 685 aa18.36■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Sycp1Q62209 993 aa18.36■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Tango6Q8C3S2 1079 aa18.36■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 IbspQ61711 324 aa18.36■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Rbm10Q99KG3 930 aaKnown RBP18.36■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Ncoa1P70365 1447 aa18.35■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Washc4Q3UMB9 1173 aa18.35■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Prpf4bQ61136 1007 aaKnown RBP18.35■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Mug1P28665 1476 aa18.35■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Abl1P00520 1123 aa18.35■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Cct4P80315 539 aaKnown RBP18.35■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Plekhd1B2RPU2 505 aa18.35■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Erc1Q99MI1 1120 aa18.34■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Tfip11Q9ERA6 838 aaKnown RBP18.34■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 ImpactO55091 318 aa18.34■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 TmpoQ61033 693 aaKnown RBP18.34■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Tmc1Q8R4P5 757 aa18.34■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Ccdc96Q9CR92 584 aa18.34■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Ppp1r15aP17564 657 aa18.34■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 CastP51125 788 aa18.34■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 CenpqQ9CPQ5 267 aa18.34■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 TchhA0A0B4J1F9 1599 aa18.34■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Fsd1Q7TPM6 496 aa18.33■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Gsdma2Q32M21 443 aa18.33■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 Def6Q8C2K1 630 aa18.33■□□□□ 0.53
Pcdha9-201ENSMUST00000115659 ImmtQ8CAQ8 757 aaKnown RBP18.33■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Krt84Q99M73 603 aa18.33■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Abcc5Q9R1X5 1436 aa18.33■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 NexmifQ5DTT1 1515 aa18.32■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 TbcaP48428 108 aaKnown RBP18.32■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Ggnbp2Q5SV77 696 aa18.32■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Cfap45Q9D9U9 551 aa18.32■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Cyp26c1B2RXA7 518 aa18.31■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Otud6bQ8K2H2 294 aa18.31■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Tspyl2Q7TQI8 677 aa18.31■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 TxlnbQ8VBT1 685 aa18.31■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 NcapgE9PWG6 1004 aa18.31■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Ccdc102aQ3TMW1 549 aa18.31■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Lmbr1Q9JIT0 490 aa18.31■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Wdr33Q8K4P0 1330 aaKnown RBP18.31■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Flad1Q8R123 492 aa18.3■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Wasf1Q8R5H6 559 aa18.3■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Mrc2Q64449 1479 aa18.3■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Ddx19aQ61655 478 aaKnown RBP18.3■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Trim34bJ3QNR8 485 aa18.3■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Top2bQ64511 1612 aa18.3■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Irgm2A0A140LIF8 407 aa18.3■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Erlin2Q8BFZ9 340 aa18.3■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 4930572O03RikQ8C5Y0 211 aa18.3■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 A2mQ6GQT1 1474 aa18.29■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Jakmip2D3YXK0 820 aa18.29■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Rufy2Q8R4C2 606 aa18.29■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Mcm4P49717 862 aa18.29■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Paxip1Q6NZQ4 1056 aa18.29■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Magi1Q6RHR9 1471 aa18.29■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Exoc6bA6H5Z3 810 aa18.29■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Mum1Q6DID5 682 aa18.29■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Sel1lQ9Z2G6 790 aa18.29■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Caskin1Q6P9K8 1431 aa18.29■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Fsd2Q8BZ52 692 aa18.29■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Syce3B5KM66 88 aa18.28■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Ttc21bQ0HA38 1315 aa18.28■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Ppm1fQ8CGA0 452 aa18.28■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Gm21698A0A087WQP8 267 aa18.28■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Zscan20B2KFW1 1030 aa18.28■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Gm21671G3UY31 267 aa18.28■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 CalrP14211 416 aaKnown RBP18.28■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Ppp1r9bQ6R891 817 aaKnown RBP18.28■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Pcf11G3X9Z4 1553 aa18.28■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Mlh3A0A1Y7VMP7 1443 aa18.28■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Afap1Q80YS6 731 aa18.28■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Samm50Q8BGH2 469 aa18.28■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Commd10Q8JZY2 202 aa18.28■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Frmpd1A2AKB4 1549 aa18.27■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Slu7Q8BHJ9 585 aa18.27■□□□□ 0.52
Pcdha9-201ENSMUST00000115659 Kank1E9Q238 1360 aa18.27■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Igf1rQ60751 1373 aa18.27■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Btbd11Q6GQW0 1109 aa18.26■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Plekhm2Q80TQ5 1018 aa18.26■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Pms1Q8K119 917 aa18.26■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Rprd2Q6NXI6 1469 aaKnown RBP18.26■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Abcd1P48410 736 aa18.26■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Eif5P59325 429 aaKnown RBP18.26■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Map9Q3TRR0 646 aa18.26■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.25■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Camsap1A2AHC3 1581 aa18.25■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Phlpp2Q8BXA7 1320 aa18.25■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Lamb3Q61087 1168 aa18.25■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms