RNA–Protein interactions for RNA: ENSMUST00000113337.9

Ubr2-202, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ubr2, Length 7,633 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-202ENSMUST00000113337 Phldb2Q8K1N2 1249 aa18.47■□□□□ 0.55
Ubr2-202ENSMUST00000113337 Rapgef4Q9EQZ6 1011 aa18.47■□□□□ 0.55
Ubr2-202ENSMUST00000113337 Fsd1Q7TPM6 496 aa18.47■□□□□ 0.55
Ubr2-202ENSMUST00000113337 Map3k13Q1HKZ5 959 aa18.47■□□□□ 0.55
Ubr2-202ENSMUST00000113337 Pabpn1Q8CCS6 302 aaKnown RBP18.46■□□□□ 0.55
Ubr2-202ENSMUST00000113337 Cetn2Q9R1K9 172 aa18.46■□□□□ 0.55
Ubr2-202ENSMUST00000113337 Zkscan2G3X952 960 aa18.46■□□□□ 0.55
Ubr2-202ENSMUST00000113337 Rnf34Q99KR6 376 aa18.46■□□□□ 0.55
Ubr2-202ENSMUST00000113337 Dact3Q0PHV7 610 aa18.45■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Znf131Q8K3J5 619 aa18.45■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Gnl2Q99LH1 728 aaKnown RBP18.45■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Fsd2Q8BZ52 692 aa18.45■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Smc1aQ9CU62 1233 aaKnown RBP18.45■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Ccdc39Q9D5Y1 937 aa18.45■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Q9D9H8 365 aa18.45■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Rai14Q9EP71 979 aaKnown RBP18.45■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Nat10Q8K224 1024 aaKnown RBP18.45■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Rab3il1Q8VDV3 383 aa18.45■□□□□ 0.54
Ubr2-202ENSMUST00000113337 HypkQ9CR41 129 aa18.45■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Fermt2Q8CIB5 680 aa18.44■□□□□ 0.54
Ubr2-202ENSMUST00000113337 NacadQ5SWP3 1504 aa18.44■□□□□ 0.54
Ubr2-202ENSMUST00000113337 ErbinQ80TH2 1402 aa18.44■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Gnai2P08752 355 aaKnown RBP18.44■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Tspyl3Q3UYP3 334 aa18.44■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Ccdc30Q8BVF4 654 aa18.44■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Nop14Q8R3N1 860 aaKnown RBP18.44■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Ttc5Q99LG4 440 aa18.44■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Knop1Q9Z2Q2 478 aaKnown RBP18.44■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Nfxl1E9Q8I7 918 aaKnown RBP18.44■□□□□ 0.54
Ubr2-202ENSMUST00000113337 CenpqQ9CPQ5 267 aa18.44■□□□□ 0.54
Ubr2-202ENSMUST00000113337 VeztQ3ZK22 780 aa18.43■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Mctp1E9PV86 951 aa18.43■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Q9D5Q8 446 aa18.43■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Trim25Q61510 634 aaKnown RBP18.43■□□□□ 0.54
Ubr2-202ENSMUST00000113337 IncenpQ9WU62 880 aa18.43■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Samm50Q8BGH2 469 aa18.43■□□□□ 0.54
Ubr2-202ENSMUST00000113337 NgdnQ9DB96 315 aaKnown RBP18.43■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Olr1Q9EQ09 363 aa18.43■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Ncapg2Q6DFV1 1138 aa18.43■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Ctnna2Q61301 953 aa18.42■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Cwc27Q3TKY6 469 aa18.42■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Cep131Q62036 1060 aa18.42■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Jakmip1Q8BVL9 626 aa18.42■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Smarcad1Q04692 1021 aa18.42■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Ces1hD3Z298 562 aa18.41■□□□□ 0.54
Ubr2-202ENSMUST00000113337 1700010I14RikQ7TPG0 532 aa18.41■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Krt84Q99M73 603 aa18.41■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Dennd6aQ8BH65 605 aa18.41■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Znf428Q8C1M2 176 aa18.41■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Cyb5rlB1AS42 316 aa18.41■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Pafah1b1P63005 410 aaKnown RBP18.41■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Zfp42P22227 288 aa18.41■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Nup88Q8CEC0 753 aaKnown RBP18.41■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Plekhg5Q66T02 1073 aa18.4■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Plekhd1B2RPU2 505 aa18.4■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Zscan10Q3URR7 782 aa18.4■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Ctage5Q8R311 779 aa18.4■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.4■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Ccdc172Q810N9 267 aa18.4■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Olfml1Q8BSH2 233 aa18.4■□□□□ 0.54
Ubr2-202ENSMUST00000113337 TprnA2AI08 749 aaKnown RBP18.4■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Tnni2P13412 182 aa18.4■□□□□ 0.54
Ubr2-202ENSMUST00000113337 ApobrQ8VBT6 942 aa18.4■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Lmbr1Q9JIT0 490 aa18.4■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Nap1l5Q9JJF0 156 aa18.4■□□□□ 0.54
Ubr2-202ENSMUST00000113337 Ppm1eQ80TL0 749 aa18.39■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Atp2b1G5E829 1220 aa18.39■□□□□ 0.53
Ubr2-202ENSMUST00000113337 CastP51125 788 aa18.39■□□□□ 0.53
Ubr2-202ENSMUST00000113337 4921504E06RikQ8CET2 560 aa18.39■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Polr3dQ91WD1 398 aa18.39■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Cabp2Q9JLK4 216 aa18.39■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Nphp1Q9QY53 687 aa18.39■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Cfap45Q9D9U9 551 aa18.38■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Exoc6bA6H5Z3 810 aa18.38■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Neurog2P70447 263 aa18.38■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Jade2Q6ZQF7 829 aa18.38■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Ift57Q8BXG3 429 aa18.38■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Smg6P61406 1418 aaKnown RBP18.38■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Gsdma2Q32M21 443 aa18.38■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Arglu1Q3UL36 271 aaKnown RBP18.38■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Cdkl5Q3UTQ8 938 aa18.38■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Atp2b2Q9R0K7 1198 aa18.38■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Cetn1P41209 172 aa18.38■□□□□ 0.53
Ubr2-202ENSMUST00000113337 SkilQ60665 675 aa18.38■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Lrrfip1Q3UZ39 729 aaKnown RBP18.37■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Atl3Q91YH5 541 aa18.37■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Cdc45Q9Z1X9 566 aa18.37■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Cfap58B2RW38 873 aa18.37■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Pknox2Q8BG99 474 aa18.37■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Fam50bQ9WTJ8 334 aa18.37■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Pms1Q8K119 917 aa18.37■□□□□ 0.53
Ubr2-202ENSMUST00000113337 4921530L21RikQ9CQ47 274 aa18.37■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Fam13aQ8BGI4 693 aa18.37■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Krt85Q9Z2T6 507 aa18.37■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Skor1Q8BX46 964 aa18.36■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Stxbp4Q9WV89 557 aa18.36■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Map3k7clP58500 142 aa18.36■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Flad1Q8R123 492 aa18.36■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Arl1P61211 181 aa18.35■□□□□ 0.53
Ubr2-202ENSMUST00000113337 Rufy2Q8R4C2 606 aa18.35■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 86 ms