RNA–Protein interactions for RNA: ENSMUST00000098441.9

Col6a6-202, Transcript of Collagen alpha-6(VI) chain, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Col6a6, Length 8,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-202ENSMUST00000098441 Rab3gap2Q8BMG7 1366 aa13.06□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Secisbp2lQ6A098 1086 aaKnown RBP13.06□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Bbof1Q3V079 533 aa13.06□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Cavin4A2AMM0 362 aa13.05□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Trim25Q61510 634 aaKnown RBP13.05□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Ppm1fQ8CGA0 452 aa13.05□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Mctp1E9PV86 951 aa13.05□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Paxbp1P58501 919 aa13.05□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Ctage5Q8R311 779 aa13.05□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Paip2Q9D6V8 124 aa13.05□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Exoc8Q6PGF7 716 aa13.05□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Skor1Q8BX46 964 aa13.05□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Ccdc39Q9D5Y1 937 aa13.05□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Fnbp4Q6ZQ03 1031 aa13.05□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Arid3cA6PWV5 409 aa13.05□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Gm1979E9QAN3 267 aa13.05□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Fam107bQ3TGF2 131 aa13.05□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Fbf1A2A870 1173 aa13.04□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Paxip1Q6NZQ4 1056 aa13.04□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Crybg2B7ZCC2 1516 aa13.04□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Abcf1Q6P542 837 aaKnown RBP13.04□□□□□ -0.32
Col6a6-202ENSMUST00000098441 NinlQ6ZQ12 1394 aa13.04□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Gigyf2Q6Y7W8 1291 aaKnown RBP13.04□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Shtn1Q8K2Q9 631 aa13.04□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Rufy2Q8R4C2 606 aa13.04□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Mphosph10Q810V0 681 aaKnown RBP13.04□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Sptbn5F6UCX4 1208 aa13.03□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Kcnh8P59111 1102 aa13.03□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Ssr1Q9CY50 286 aaKnown RBP13.03□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Stk3Q9JI10 497 aa13.03□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Washc4Q3UMB9 1173 aa13.03□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Nup88Q8CEC0 753 aaKnown RBP13.03□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Gm21671G3UY31 267 aa13.03□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Jade2Q6ZQF7 829 aa13.03□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Zscan20B2KFW1 1030 aa13.03□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Smco2Q9DA21 347 aa13.03□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Fyb1O35601 819 aa13.02□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Znf704Q9ERQ3 566 aa13.02□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Wdr63B2RY71 923 aa13.02□□□□□ -0.32
Col6a6-202ENSMUST00000098441 Tubb4bP68372 445 aaKnown RBP13.02□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Ankrd1Q9CR42 319 aa13.02□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Olr1Q9EQ09 363 aa13.02□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Gbp1Q01514 589 aa13.02□□□□□ -0.33
Col6a6-202ENSMUST00000098441 IqcgQ80W32 419 aa13.02□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Stard3nlQ9DCI3 235 aa13.02□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Als2cr12Q8BVM7 383 aa13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Ttll5Q8CHB8 1328 aa13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 ScribQ80U72 1612 aa13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Gbp8Q2V6D6 525 aa13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Fsd1Q7TPM6 496 aa13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Abl1P00520 1123 aa13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 L1td1Q587J6 782 aaKnown RBP13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Sart1Q9Z315 806 aaKnown RBP13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Brms1Q99N20 246 aa13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Rapgef2Q8CHG7 1496 aa13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Anapc15-psA0A140T8L6 141 aa13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Pdia4P08003 638 aaKnown RBP13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Uri1Q3TLD5 531 aa13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Tax1bp1Q3UKC1 814 aaKnown RBP13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Tmc1Q8R4P5 757 aa13.01□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Stxbp4Q9WV89 557 aa13□□□□□ -0.33
Col6a6-202ENSMUST00000098441 BcanQ61361 883 aa13□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Ehbp1Q69ZW3 1231 aa13□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Ccdc172Q810N9 267 aa13□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Trim11Q99PQ2 467 aa13□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Nphp1Q9QY53 687 aa13□□□□□ -0.33
Col6a6-202ENSMUST00000098441 TefQ9JLC6 301 aa13□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Hspa4Q61316 841 aa13□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Vps8Q0P5W1 1427 aa13□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Hvcn1Q3U2S8 269 aa13□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Cc2d2aQ8CFW7 1633 aa12.99□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Ccdc93Q7TQK5 629 aa12.99□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Sept11Q8C1B7 431 aaKnown RBP12.99□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Ctr9Q62018 1173 aaKnown RBP12.99□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Jakmip1Q8BVL9 626 aa12.99□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Mink1Q9JM52 1308 aa12.99□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Efcab5A0JP43 1406 aa12.99□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Ktn1Q61595 1327 aaKnown RBP12.99□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Ccdc73Q8CDM4 1066 aa12.99□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Rnf34Q99KR6 376 aa12.99□□□□□ -0.33
Col6a6-202ENSMUST00000098441 IkQ9Z1M8 557 aaKnown RBP12.99□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Sparcl1P70663 650 aa12.98□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Syce3B5KM66 88 aa12.98□□□□□ -0.33
Col6a6-202ENSMUST00000098441 ImpactO55091 318 aa12.98□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Dusp27Q148W8 1138 aa12.98□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Ssh1Q76I79 1042 aa12.98□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Riok1Q922Q2 567 aa12.98□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Akap2O54931 893 aa12.98□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Kif18aQ91WD7 886 aa12.98□□□□□ -0.33
Col6a6-202ENSMUST00000098441 HypkQ9CR41 129 aa12.98□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Fsd2Q8BZ52 692 aa12.98□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Gm21680A0A0G2JGR8 267 aa12.98□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Shq1Q7TMX5 569 aa12.98□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Frmd3Q8BHD4 595 aa12.98□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Rpgrip1lQ8CG73 1264 aa12.97□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Knop1Q9Z2Q2 478 aaKnown RBP12.97□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Erich4Q3UNU4 136 aa12.97□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Calml4Q91WQ9 153 aa12.97□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Znf710Q3U288 666 aa12.97□□□□□ -0.33
Col6a6-202ENSMUST00000098441 Iqca1Q9CUL5 857 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms