RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Disp1Q3TDN0 1521 aa18.82■□□□□ 0.6
Clcn3-203ENSMUST00000093490 ApobrQ8VBT6 942 aa18.81■□□□□ 0.6
Clcn3-203ENSMUST00000093490 PrxO55103 1391 aa18.81■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Ncbp1Q3UYV9 790 aaKnown RBP18.81■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Tubb6Q922F4 447 aa18.81■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Btbd11Q6GQW0 1109 aa18.81■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Cdc37l1Q9CZP7 335 aa18.81■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Nop14Q8R3N1 860 aaKnown RBP18.81■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Cwc15Q9JHS9 229 aaKnown RBP18.81■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Dmrt2Q8BG36 561 aa18.8■□□□□ 0.6
Clcn3-203ENSMUST00000093490 TmpoQ61033 693 aaKnown RBP18.8■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Rufy1Q8BIJ7 712 aa18.8■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Gtf2a1Q99PM3 378 aa18.8■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Map4k4P97820 1233 aaKnown RBP18.8■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Mns1Q61884 491 aa18.8■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Nol11Q8BJW5 723 aaKnown RBP18.79■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Hnrnpul1Q8VDM6 859 aaKnown RBP18.79■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Dnajc5bQ9CQ94 199 aa18.79■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Wdr78E9PYY5 807 aa18.79■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Sptbn5F6UCX4 1208 aa18.79■□□□□ 0.6
Clcn3-203ENSMUST00000093490 TimelessQ9R1X4 1197 aa18.79■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Wdr7Q920I9 1489 aa18.78■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Cfap74Q3UY96 1578 aa18.78■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Ipo4Q8VI75 1082 aa18.78■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Kdm5bQ80Y84 1544 aa18.78■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Kif3cO35066 796 aa18.78■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Agtpbp1Q641K1 1218 aa18.78■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Nutm1Q8BHP2 1126 aa18.78■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Cers3Q1A3B0 383 aa18.77■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Rnf214Q8BFU3 668 aaKnown RBP18.77■□□□□ 0.6
Clcn3-203ENSMUST00000093490 Ppp4r3bQ922R5 820 aa18.77■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Usp48Q3V0C5 1052 aa18.76■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Farp2Q91VS8 1065 aa18.76■□□□□ 0.59
Clcn3-203ENSMUST00000093490 TnnQ80Z71 1560 aa18.75■□□□□ 0.59
Clcn3-203ENSMUST00000093490 WizO88286 1684 aaKnown RBP18.75■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Gsdma2Q32M21 443 aa18.75■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Smc2Q8CG48 1191 aaKnown RBP18.75■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Nlrp3Q8R4B8 1033 aa18.75■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.75■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Thoc2B1AZI6 1594 aaKnown RBP18.74■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Hoxb7P09024 217 aa18.74■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Kcnh8P59111 1102 aa18.74■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Egfem1Q8C088 590 aa18.74■□□□□ 0.59
Clcn3-203ENSMUST00000093490 ScaperF8VQ70 1398 aaKnown RBP18.74■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Pde4bB1AWC9 736 aa18.74■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Kif20aP97329 887 aa18.74■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Necab1Q8BG18 352 aa18.74■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Ncoa3O09000 1398 aa18.74■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Ccdc43Q9CR29 222 aaKnown RBP18.74■□□□□ 0.59
Clcn3-203ENSMUST00000093490 NgdnQ9DB96 315 aaKnown RBP18.74■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Abcc1O35379 1528 aa18.74■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Mum1Q6DID5 682 aa18.74■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Pde4dQ01063 747 aa18.73■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Jmjd4Q8BFT6 427 aa18.73■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Ttc5Q99LG4 440 aa18.73■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Pik3c2gO70167 1506 aa18.73■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Slx4Q6P1D7 1565 aa18.73■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Gimap5Q8BWF2 308 aa18.73■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Sugp2Q8CH09 1067 aa18.73■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Washc4Q3UMB9 1173 aa18.72■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Rprd2Q6NXI6 1469 aaKnown RBP18.72■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Pla2r1Q62028 1487 aa18.72■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Fam13bQ8K2H3 851 aa18.72■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Riok1Q922Q2 567 aa18.72■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Shroom2A2ALU4 1481 aa18.72■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Dennd4bQ3U1Y4 1499 aa18.71■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Chaf1aQ9QWF0 911 aa18.71■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Rbm28Q8CGC6 750 aaKnown RBP18.71■□□□□ 0.59
Clcn3-203ENSMUST00000093490 Cep131Q62036 1060 aa18.7■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Kif18aQ91WD7 886 aa18.7■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Q9D9S1 216 aa18.7■□□□□ 0.58
Clcn3-203ENSMUST00000093490 FosbP13346 338 aa18.69■□□□□ 0.58
Clcn3-203ENSMUST00000093490 March6Q6ZQ89 909 aa18.69■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Ttc19Q8CC21 365 aa18.69■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Pbrm1Q8BSQ9 1634 aaKnown RBP18.69■□□□□ 0.58
Clcn3-203ENSMUST00000093490 GnpatP98192 678 aa18.69■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Klc3Q91W40 508 aa18.69■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Kcnn1Q9EQR3 537 aa18.69■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Stk3Q9JI10 497 aa18.69■□□□□ 0.58
Clcn3-203ENSMUST00000093490 TnikP83510 1323 aa18.69■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Sall3Q62255 1320 aa18.69■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Ggnbp2Q5SV77 696 aa18.69■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Fkbp5Q64378 456 aa18.69■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Nol12Q8BG17 217 aa18.69■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Slc5a1Q8C3K6 665 aa18.69■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Sytl4Q9R0Q1 673 aa18.68■□□□□ 0.58
Clcn3-203ENSMUST00000093490 MvpQ9EQK5 861 aa18.68■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Naip6Q9JIB6 1403 aa18.68■□□□□ 0.58
Clcn3-203ENSMUST00000093490 BC005561E9Q5E2 1589 aa18.68■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Ssh1Q76I79 1042 aa18.68■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Olfml1Q8BSH2 233 aa18.68■□□□□ 0.58
Clcn3-203ENSMUST00000093490 RalgapbQ8BQZ4 1484 aa18.68■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Fam193aQ8CGI1 1231 aaKnown RBP18.67■□□□□ 0.58
Clcn3-203ENSMUST00000093490 HmmrQ00547 794 aaKnown RBP18.67■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Cwc27Q3TKY6 469 aa18.67■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Cog6Q8R3I3 657 aa18.67■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Talpid3E9PV87 1520 aa18.66■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Kif21aQ9QXL2 1672 aa18.66■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Tom1O88746 492 aa18.66■□□□□ 0.58
Clcn3-203ENSMUST00000093490 Fam50bQ9WTJ8 334 aa18.66■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms