RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Gm16486A0A1D5RMD1 1434 aa11.73□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Abcc5Q9R1X5 1436 aa11.73□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Supt6hQ62383 1726 aaKnown RBP11.73□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Kif3cO35066 796 aa11.73□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Anp32eP97822 260 aaKnown RBP11.73□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Spata16Q8C636 571 aa11.73□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Eif4g3Q80XI3 1579 aaKnown RBP11.72□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Dip2aQ8BWT5 1523 aa11.72□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Tmf1B9EKI3 1091 aa11.72□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 AU019823E9PUQ3 292 aa11.72□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 SkilQ60665 675 aa11.72□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 E2f4Q8R0K9 410 aa11.72□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Atg3Q9CPX6 314 aa11.72□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Cabp1Q9JLK7 227 aa11.72□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 NexmifQ5DTT1 1515 aa11.72□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Kdm3bQ6ZPY7 1562 aa11.72□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Gas2l2Q5SSG4 860 aa11.72□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Trak1Q6PD31 939 aa11.72□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Shroom2A2ALU4 1481 aa11.71□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Klhl34A2AI76 644 aa11.71□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Gadd45bP22339 160 aa11.71□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Cdk4P30285 303 aa11.71□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Cfap74Q3UY96 1578 aa11.71□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Rab3gap1Q80UJ7 981 aa11.7□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Grwd1Q810D6 446 aaKnown RBP11.7□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Arhgef11Q68FM7 1552 aa11.7□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Rfc1P35601 1131 aa11.7□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 CastP51125 788 aa11.7□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Tmed8Q3UHI4 326 aa11.7□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Uspl1Q3ULM6 1089 aa11.7□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Pwp2Q8BU03 919 aaKnown RBP11.7□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Otud6bQ8K2H2 294 aa11.7□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Ifi35Q9D8C4 286 aa11.7□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Cspp1B2RX88 1205 aa11.69□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Tbc1d9Q3UYK3 1264 aa11.69□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Mmel1Q9JLI3 765 aa11.69□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Wdr62Q3U3T8 1523 aa11.69□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Fsd2Q8BZ52 692 aa11.69□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Col17a1Q07563 1470 aa11.69□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Nlrp3Q8R4B8 1033 aa11.68□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Golga2Q921M4 999 aa11.68□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Q9CYI0 393 aa11.68□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Cwc15Q9JHS9 229 aaKnown RBP11.68□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Atp2b2Q9R0K7 1198 aa11.68□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 GorabQ8BRM2 368 aa11.68□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Bicd2Q921C5 820 aa11.68□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Zfp51Q3U4L8 781 aa11.68□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Npdc1Q64322 332 aa11.68□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Adcy2Q80TL1 1090 aa11.68□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Saal1Q9D2C2 474 aa11.67□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 NagaQ9QWR8 415 aa11.67□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 CebpzP53569 1052 aaKnown RBP11.67□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Nop14Q8R3N1 860 aaKnown RBP11.67□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Tpm1P58771 284 aa11.66□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Phf23Q8BSN5 401 aa11.66□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Trpm2Q91YD4 1506 aa11.66□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Wdr63B2RY71 923 aa11.66□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Irf6P97431 467 aa11.66□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Ccdc162pQ0VG85 912 aa11.66□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Casc1Q6TDU8 730 aa11.66□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Cetn4Q8K4K1 168 aa11.66□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Rbm33Q9CXK9 1231 aaKnown RBP11.66□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Trappc8E9PWG2 1437 aa11.65□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Dot1lQ6XZL8 1540 aa11.65□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Iqsec2Q5DU25 1478 aa11.65□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Gm45015A0A140LII9 184 aa11.65□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Gm18336A0A140LIU8 765 aa11.65□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 CalrP14211 416 aaKnown RBP11.65□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 Cavin2Q63918 418 aaKnown RBP11.65□□□□□ -0.54
Hmgb1-201ENSMUST00000085546 H2afxP27661 143 aaKnown RBP11.64□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Plcb3P51432 1234 aaKnown RBP11.64□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Wwc1Q5SXA9 1104 aa11.64□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Q8VDP2 222 aa11.64□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Cyp27a1Q9DBG1 533 aa11.64□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 NefhP19246 1090 aa11.64□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Paxbp1P58501 919 aa11.64□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Gdpd2Q9ESM6 539 aa11.64□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Trim55G3X8Y1 545 aa11.64□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Fam184bQ0KK56 942 aa11.64□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Cfap157Q0VFX2 523 aa11.64□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Ccar1Q8CH18 1146 aaKnown RBP11.64□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Dnai2A2AC93 623 aa11.63□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Ift57Q8BXG3 429 aa11.63□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Smc2Q8CG48 1191 aaKnown RBP11.63□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Cep135Q6P5D4 1140 aa11.63□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 BC005561E9Q5E2 1589 aa11.63□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Arhgap31A6X8Z5 1425 aa11.62□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Ttll5Q8CHB8 1328 aa11.62□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Ccz1Q8C1Y8 480 aa11.62□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Kiaa1107Q80TK0 1369 aa11.62□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Irx1P81068 480 aa11.62□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Acbd5Q5XG73 508 aa11.62□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Adck5Q80V03 582 aa11.62□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Mis12Q9CY25 206 aa11.62□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Utp3Q9JI13 469 aaKnown RBP11.62□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Nek4Q9Z1J2 792 aa11.62□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Kansl3A2RSY1 903 aaKnown RBP11.61□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Rnaseh1O70338 285 aa11.61□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Cfdp1O88271 295 aaKnown RBP11.61□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 LifrP42703 1092 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms