RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 CenphQ9QYM8 241 aa11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Eif3aP23116 1344 aaKnown RBP11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Gm7298A0A0N4SVU1 1476 aa11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Slu7Q8BHJ9 585 aa11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Smarca5Q91ZW3 1051 aaKnown RBP11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Fam184aE9PW83 1143 aa11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Otud6bQ8K2H2 294 aa11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Eif5P59325 429 aaKnown RBP11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Ccar2Q8VDP4 922 aaKnown RBP11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Evi5lH3BKQ3 813 aa11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Abcd1P48410 736 aa11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 PsapQ61207 557 aaKnown RBP11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Afap1Q80YS6 731 aa11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 TbcaP48428 108 aaKnown RBP11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Slc13a4Q8BZ82 625 aa11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Dhx8A2A4P0 1244 aaKnown RBP11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Hap1O35668 628 aa11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Atf3Q60765 181 aa11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Pof1bQ8K4L4 587 aa11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Gnl2Q99LH1 728 aaKnown RBP11.06□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 NrkQ9R0G8 1455 aa11.05□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Smg7Q5RJH6 1138 aaKnown RBP11.05□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Kdm4aQ8BW72 1064 aa11.05□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Paf1Q8K2T8 535 aa11.05□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 NcapgE9PWG6 1004 aa11.05□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Ppp4r3bQ922R5 820 aa11.05□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Tango6Q8C3S2 1079 aa11.05□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Lrrcc1Q69ZB0 1026 aa11.05□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Spag5Q7TME2 1165 aa11.05□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Dennd6aQ8BH65 605 aa11.05□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Ccdc96Q9CR92 584 aa11.05□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Sirt1Q923E4 737 aa11.05□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Larp1Q6ZQ58 1072 aaKnown RBP11.04□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Stard3nlQ9DCI3 235 aa11.04□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Fchsd2Q3USJ8 740 aa11.04□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Trim25Q61510 634 aaKnown RBP11.04□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Erich4Q3UNU4 136 aa11.04□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Ppp6r1Q7TSI3 856 aa11.04□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Fam43aQ8BUP8 424 aa11.04□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Erc1Q99MI1 1120 aa11.04□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Sel1lQ9Z2G6 790 aa11.04□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Phldb2Q8K1N2 1249 aa11.04□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Cep89Q9CZX2 791 aa11.04□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 TimelessQ9R1X4 1197 aa11.04□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Rhot2Q8JZN7 620 aa11.03□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Gigyf1Q99MR1 1044 aaKnown RBP11.03□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Spty2d1Q68FG3 682 aa11.03□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Rcan3Q9JKK0 239 aa11.03□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Mcm3P25206 812 aaKnown RBP11.03□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Gps2Q921N8 327 aa11.03□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Trim55G3X8Y1 545 aa11.03□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Brf1Q8CFK2 676 aa11.03□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Zbtb22Q9Z0G7 638 aa11.03□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Dnajc2P54103 621 aaKnown RBP11.03□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Pms1Q8K119 917 aa11.03□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Cdc45Q9Z1X9 566 aa11.03□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Irgm2A0A140LIF8 407 aa11.02□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Ehmt1Q5DW34 1296 aa11.02□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 CenpqQ9CPQ5 267 aa11.02□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 ImpactO55091 318 aa11.02□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Mroh2bQ7M6Y6 1581 aa11.02□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Ccdc181Q80ZU5 509 aa11.02□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Themis2Q91YX0 663 aa11.02□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Map3k1P53349 1493 aa11.02□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 CalrP14211 416 aaKnown RBP11.02□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Stim1P70302 685 aa11.02□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Rufy2Q8R4C2 606 aa11.02□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Il16O54824 1322 aa11.02□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Wdr33Q8K4P0 1330 aaKnown RBP11.02□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Aldh1l1Q8R0Y6 902 aa11.01□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 PtprkP35822 1457 aa11.01□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Pip4k2aO70172 405 aa11.01□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Fsd2Q8BZ52 692 aa11.01□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 MicalclQ9D5U9 680 aa11.01□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Map4k4P97820 1233 aaKnown RBP11.01□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Erlin2Q8BFZ9 340 aa11.01□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Jakmip2D3YXK0 820 aa11.01□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Ttc19Q8CC21 365 aa11.01□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Asxl1P59598 1514 aa11□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Gjb2Q00977 226 aa11□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Ppp1r9bQ6R891 817 aaKnown RBP11□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Fam13aQ8BGI4 693 aa11□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Dnaaf4Q8R368 420 aa11□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Rbm5Q91YE7 815 aaKnown RBP11□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 TchhA0A0B4J1F9 1599 aa11□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Prl7d1P04769 244 aa11□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Hvcn1Q3U2S8 269 aa11□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Rnf187Q8BFX1 236 aa11□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Gas2l3Q3UWW6 683 aa11□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Ddx54Q8K4L0 874 aaKnown RBP11□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 TmpoQ61033 693 aaKnown RBP10.99□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Btbd11Q6GQW0 1109 aa10.99□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 ZwintQ9CQU5 252 aa10.99□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Ccdc141E9Q8Q6 1531 aa10.99□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Cdkl5Q3UTQ8 938 aa10.99□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 IbtkQ6ZPR6 1352 aaKnown RBP10.99□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Zscan20B2KFW1 1030 aa10.99□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Wwc1Q5SXA9 1104 aa10.99□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Luc7lQ9CYI4 371 aaKnown RBP10.99□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Grin2bQ01097 1482 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 146.4 ms