RNA–Protein interactions for RNA: ENSMUST00000057228.1

Pcdhb9-201, Transcript of Protocadherin beta 9, mousemouse

APPRIS P1 BASIC

Gene Pcdhb9, Length 3,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9-201ENSMUST00000057228 Rapgef3Q8VCC8 918 aa13.76□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Cdk12Q14AX6 1484 aaKnown RBP13.76□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Rwdd1Q9CQK7 243 aa13.75□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Cavin4A2AMM0 362 aa13.75□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Ppp1r3fQ9JIG4 799 aa13.75□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Ccne1Q61457 408 aa13.75□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Ttc41Q692V3 1318 aa13.74□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Snap23O09044 210 aa13.74□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Tspyl2Q7TQI8 677 aa13.74□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Pank1Q8K4K6 548 aa13.74□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 CemipQ8BI06 1361 aa13.74□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Klhdc4Q921I2 584 aa13.73□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Spef2Q8C9J3 1734 aa13.73□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 NeflP08551 543 aa13.73□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 TnikP83510 1323 aa13.73□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Hoxb7P09024 217 aa13.72□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Iqcf3Q9D498 203 aa13.72□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Col18a1P39061 1774 aa13.72□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 PtprvP70289 1705 aa13.72□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Scn7aB1AYL1 1681 aa13.71□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Fyb1O35601 819 aa13.71□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Eya1P97767 591 aa13.71□□□□□ -0.21
Pcdhb9-201ENSMUST00000057228 Fchsd2Q3USJ8 740 aa13.71□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Swt1Q9DBQ9 907 aa13.7□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Hoxc9P09633 260 aa13.7□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Wdr17E9Q271 1322 aa13.7□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.7□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Gtf2a1Q99PM3 378 aa13.7□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Unc13bQ9Z1N9 1602 aa13.69□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Rbm25B2RY56 838 aaKnown RBP13.69□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Ankrd50F7BE84 1390 aa13.69□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 AampJ3QN89 436 aa13.68□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Uhrf1bp1B2KF50 1429 aa13.68□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 CastP51125 788 aa13.68□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Farp2Q91VS8 1065 aa13.67□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Dnajc10Q9DC23 793 aa13.67□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Ttc21aQ8C0S4 1314 aa13.67□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Nectin2P32507 530 aa13.67□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Znf330Q922H9 316 aa13.66□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Stk31Q99MW1 1018 aa13.66□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Gm6268A2A3U9 297 aa13.65□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Pibf1E9Q6K3 756 aa13.65□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 U2surpQ6NV83 1029 aaKnown RBP13.65□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Cdc37l1Q9CZP7 335 aa13.65□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Ncapd2Q8K2Z4 1392 aa13.65□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Ccdc60Q8C4J0 545 aa13.65□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 TimelessQ9R1X4 1197 aa13.65□□□□□ -0.22
Pcdhb9-201ENSMUST00000057228 Atf3Q60765 181 aa13.65□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 TmpoQ61033 693 aaKnown RBP13.65□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Ccar1Q8CH18 1146 aaKnown RBP13.65□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Amotl2Q8K371 772 aa13.65□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Mdc1Q5PSV9 1707 aa13.64□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Prim1P20664 417 aa13.64□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Nutm1Q8BHP2 1126 aa13.64□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Prkrip1Q9CWV6 186 aaKnown RBP13.64□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Atp7bQ64446 1462 aa13.64□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Nfat5Q9WV30 1534 aa13.64□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 PaskQ8CEE6 1383 aa13.64□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Dzip1Q8BMD2 852 aa13.64□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Znf541Q0GGX2 1363 aa13.63□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Ggnbp2Q5SV77 696 aa13.63□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 1700019A02RikA0A087WPV9 146 aa13.63□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Scaf1Q5U4C3 1256 aaKnown RBP13.63□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 TatQ8QZR1 454 aa13.63□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Kcna6Q61923 529 aa13.62□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Dixdc1Q80Y83 711 aa13.62□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Zfp777B9EKF4 885 aa13.62□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Usp16Q99LG0 825 aa13.62□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Aplp1Q03157 653 aa13.61□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Ncoa4Q5U4H9 625 aa13.61□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Dbr1Q923B1 550 aa13.61□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Ano8Q6PB70 1060 aa13.6□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Tmco5bQ80X59 307 aa13.6□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Ncbp3Q8BZR9 615 aaKnown RBP13.6□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Rrp9Q91WM3 475 aaKnown RBP13.6□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Vamp4O70480 141 aa13.6□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Robo1O89026 1612 aa13.6□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 4933416C03RikQ3V063 378 aa13.6□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Ahnak2E9PYB0 1738 aaKnown RBP13.59□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 B4galnt3Q6L8S8 986 aa13.59□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Duxf3A0A0N4SV92 674 aa13.59□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Nkx2-3P97334 362 aa13.59□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Ciz1Q8VEH2 845 aa13.59□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Armcx1Q9CX83 456 aa13.59□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Wnk3Q80XP9 1757 aa13.59□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Ptpn23Q6PB44 1692 aa13.58□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Brinp3Q499E0 766 aa13.58□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Trim58Q5NCC9 485 aa13.58□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Rlbp1Q9Z275 317 aa13.58□□□□□ -0.23
Pcdhb9-201ENSMUST00000057228 Kdm2bQ6P1G2 1309 aa13.58□□□□□ -0.24
Pcdhb9-201ENSMUST00000057228 Gimap6Q8K349 305 aa13.58□□□□□ -0.24
Pcdhb9-201ENSMUST00000057228 Gli3Q61602 1583 aa13.57□□□□□ -0.24
Pcdhb9-201ENSMUST00000057228 Tet3Q8BG87 1668 aa13.57□□□□□ -0.24
Pcdhb9-201ENSMUST00000057228 DmtnQ9WV69 405 aa13.57□□□□□ -0.24
Pcdhb9-201ENSMUST00000057228 G3bp1P97855 465 aaKnown RBP13.57□□□□□ -0.24
Pcdhb9-201ENSMUST00000057228 Plekhm2Q80TQ5 1018 aa13.57□□□□□ -0.24
Pcdhb9-201ENSMUST00000057228 Znf521Q6KAS7 1311 aa13.57□□□□□ -0.24
Pcdhb9-201ENSMUST00000057228 Cyb5rlB1AS42 316 aa13.56□□□□□ -0.24
Pcdhb9-201ENSMUST00000057228 Gnai1B2RSH2 354 aa13.56□□□□□ -0.24
Pcdhb9-201ENSMUST00000057228 Gnai3Q9DC51 354 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms