RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Uri1Q3TLD5 531 aa8.39□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Erc2Q6PH08 957 aa8.39□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Slx4Q6P1D7 1565 aa8.39□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Eif5P59325 429 aaKnown RBP8.39□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Nup88Q8CEC0 753 aaKnown RBP8.39□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Mmel1Q9JLI3 765 aa8.39□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Sparcl1P70663 650 aa8.39□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Sytl4Q9R0Q1 673 aa8.39□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Odf2A3KGV1 830 aaKnown RBP8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Cfap58B2RW38 873 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Zkscan2G3X952 960 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Gm21969J3QJZ1 289 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Usp16Q99LG0 825 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Stk3Q9JI10 497 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Nucb2P81117 420 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Cep112Q5PR68 954 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Exoc8Q6PGF7 716 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Rab11fip3Q8CHD8 1047 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Gys2Q8VCB3 704 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Fancd2Q80V62 1450 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Pla2r1Q62028 1487 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 CebpzP53569 1052 aaKnown RBP8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 MpndQ3TV65 487 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Lamb3Q61087 1168 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Dydc1Q9D9T0 175 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Ccdc181Q80ZU5 509 aa8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Nat10Q8K224 1024 aaKnown RBP8.38□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Atp10dQ8K2X1 1416 aa8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 U2af2P26369 475 aaKnown RBP8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Ddx11Q6AXC6 880 aa8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Dnaaf4Q8R368 420 aa8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Cabp4Q8VHC5 271 aa8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Chd1lQ9CXF7 900 aa8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Zbtb22Q9Z0G7 638 aa8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Samd9lQ69Z37 1561 aa8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Kank1E9Q238 1360 aa8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Cplx2P84086 134 aa8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Slu7Q8BHJ9 585 aa8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 CenpqQ9CPQ5 267 aa8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Q9D9S1 216 aa8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Thoc2B1AZI6 1594 aaKnown RBP8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 DroshaQ5HZJ0 1373 aaKnown RBP8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Sh3bp1P55194 680 aa8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Secisbp2lQ6A098 1086 aaKnown RBP8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Q8C5K5 320 aa8.37□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Pank2Q3U4S0 443 aa8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Smc1bQ920F6 1248 aa8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Gnl2Q99LH1 728 aaKnown RBP8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Dhx30Q99PU8 1217 aaKnown RBP8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 PdiltQ9DAN1 588 aa8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Gm1043A0A140LJC2 1431 aa8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Dync1i1O88485 628 aa8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Dnajc2P54103 621 aaKnown RBP8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Pde1cQ64338 706 aa8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Q9D9H8 365 aa8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Zkscan7E9PVW1 718 aa8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Cfap99A0A140LIX9 648 aa8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Dhx16G3X8X0 1044 aaKnown RBP8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Nom1Q3UFM5 854 aaKnown RBP8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Maats1Q8BRC6 783 aa8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Krt82Q99M74 516 aa8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 CenphQ9QYM8 241 aa8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Krt85Q9Z2T6 507 aa8.36□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Nap1l1P28656 391 aaKnown RBP8.35□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Tbc1d32Q3URV1 1296 aa8.35□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Cep135Q6P5D4 1140 aa8.35□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Gcc1Q9D4H2 778 aa8.35□□□□□ -1.07
Smc1a-201ENSMUST00000045312 SelenooQ9DBC0 667 aa8.35□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Rab3gap2Q8BMG7 1366 aa8.35□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Eif4g1Q6NZJ6 1600 aaKnown RBP8.35□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Tmc1Q8R4P5 757 aa8.35□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Rassf4Q8CB96 322 aa8.35□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Vps18Q8R307 973 aa8.35□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Slc52a2Q9D8F3 450 aa8.35□□□□□ -1.07
Smc1a-201ENSMUST00000045312 CarsQ9ER72 831 aaKnown RBP8.35□□□□□ -1.07
Smc1a-201ENSMUST00000045312 WizO88286 1684 aaKnown RBP8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Rapgef6Q5NCJ1 1609 aa8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Mcm6P97311 821 aa8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Afap1Q80YS6 731 aa8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 OvosQ3UU35 1456 aa8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Gnai1B2RSH2 354 aa8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Ranbp1P34022 203 aaKnown RBP8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Jakmip3Q5DTN8 844 aa8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 SrrtQ99MR6 875 aaKnown RBP8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Swt1Q9DBQ9 907 aa8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Gnai3Q9DC51 354 aa8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Zeb2Q9R0G7 1215 aa8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Gm45140A0A0N4SUM8 220 aa8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Jakmip2D3YXK0 820 aa8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Kif2aP28740 705 aa8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Stk38Q91VJ4 465 aa8.34□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Ncoa3O09000 1398 aa8.34□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ggt6Q6PDE7 497 aa8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Maco1Q7TQE6 664 aaKnown RBP8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Iqca1Q9CUL5 857 aa8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 PxdnQ3UQ28 1475 aa8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Dhx8A2A4P0 1244 aaKnown RBP8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Psma5Q9Z2U1 241 aaKnown RBP8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Asxl1P59598 1514 aa8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Kif21aQ9QXL2 1672 aa8.33□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 153.8 ms