RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Ppp1r3fQ9JIG4 799 aa11.78□□□□□ -0.52
Ctnna1-201ENSMUST00000042345 Cavin2Q63918 418 aaKnown RBP11.77□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 MarsQ68FL6 902 aaKnown RBP11.76□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Dlg5E9Q9R9 1921 aa11.76□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Vamp4O70480 141 aa11.76□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Eif4a2P10630 407 aa11.76□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Phf23Q8BSN5 401 aa11.76□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Msh6P54276 1358 aaKnown RBP11.76□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Sos1Q62245 1319 aa11.75□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Prdm10Q3UTQ7 1184 aa11.75□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Rbm25B2RY56 838 aaKnown RBP11.75□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Nup153E9Q3G8 1462 aaKnown RBP11.75□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Ano8Q6PB70 1060 aa11.74□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 FancaQ9JL70 1439 aa11.74□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Cdc37l1Q9CZP7 335 aa11.74□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Chmp5Q9D7S9 219 aa11.74□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Apbb1Q9QXJ1 710 aa11.74□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Idi1P58044 227 aa11.73□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 FocadA2AKG8 1798 aa11.73□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Tns3Q5SSZ5 1440 aa11.73□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Q3UPC7 1272 aa11.72□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Tmem2Q5FWI3 1383 aa11.72□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Atl3Q91YH5 541 aa11.72□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 KarsQ99MN1 595 aaKnown RBP11.72□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 NudcO35685 332 aaKnown RBP11.71□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Abca15E9PWH4 1668 aa11.71□□□□□ -0.53
Ctnna1-201ENSMUST00000042345 Tnks1bp1P58871 1720 aa11.71□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 GphnQ8BUV3 769 aaKnown RBP11.71□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Aldh1l1Q8R0Y6 902 aa11.7□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Nlgn1Q99K10 843 aa11.7□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Gnai1B2RSH2 354 aa11.7□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Plekhm2Q80TQ5 1018 aa11.7□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Gnai3Q9DC51 354 aa11.7□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Igsf1Q7TQA1 1317 aa11.69□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Ncapd2Q8K2Z4 1392 aa11.69□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Phlpp2Q8BXA7 1320 aa11.69□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Maco1Q7TQE6 664 aaKnown RBP11.69□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Chl1P70232 1209 aa11.68□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Kif24Q6NWW5 1356 aa11.68□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Ppp2r3aB2RXC8 1150 aa11.68□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Mcm10Q0VBD2 885 aa11.68□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 AU019823E9PUQ3 292 aa11.67□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Ubr2Q6WKZ8 1755 aa11.67□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Birc3O08863 600 aa11.67□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 B4galnt3Q6L8S8 986 aa11.67□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Frmpd2A0A140LI67 1392 aa11.67□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Ankrd44B2RXR6 993 aa11.66□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 G3bp1P97855 465 aaKnown RBP11.66□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Ccdc60Q8C4J0 545 aa11.66□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Aldh1l2Q8K009 923 aa11.66□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Cabp2Q9JLK4 216 aa11.66□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Znf316Q6PGE4 1016 aa11.66□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 MvpQ9EQK5 861 aa11.66□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Bcl9lQ67FY2 1494 aa11.66□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Ccdc183A2AJB1 534 aa11.65□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Gm10563F6WIE4 79 aa11.65□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Ncoa4Q5U4H9 625 aa11.65□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Pcdh10E9PXQ7 1057 aa11.65□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Tbc1d32Q3URV1 1296 aa11.65□□□□□ -0.54
Ctnna1-201ENSMUST00000042345 Wwc1Q5SXA9 1104 aa11.64□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Iqcf3Q9D498 203 aa11.64□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Pnpla7A2AJ88 1352 aa11.64□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Nckap5lQ6GQX2 1323 aa11.63□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Amer1Q7TS75 1132 aa11.63□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Brd1E9PZ26 1189 aaKnown RBP11.63□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Pnmal2G3X9N3 661 aa11.63□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Hoxc9P09633 260 aa11.63□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Pdlim2Q8R1G6 349 aa11.63□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Eya1P97767 591 aa11.62□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Ppp1r9bQ6R891 817 aaKnown RBP11.62□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Dennd6aQ8BH65 605 aa11.62□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Tmem94Q7TSH8 1360 aa11.62□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Kdm6aO70546 1401 aa11.62□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 LifrP42703 1092 aa11.62□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Kif2cQ922S8 721 aa11.62□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Ak7Q9D2H2 614 aa11.62□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Ipo8Q7TMY7 1010 aa11.61□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Safb2Q80YR5 991 aaKnown RBP11.61□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Ltbp4Q8K4G1 1666 aa11.61□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Tjp1P39447 1745 aaKnown RBP11.61□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Zfp777B9EKF4 885 aa11.61□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Dbr1Q923B1 550 aa11.61□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Scn4aQ9ER60 1841 aa11.61□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Foxp4Q9DBY0 795 aaKnown RBP11.61□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Tm6sf1P58749 370 aa11.6□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Slc35g1Q8BY79 368 aa11.6□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Stk31Q99MW1 1018 aa11.6□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 MpripP97434 1024 aa11.6□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Abcc12Q80WJ6 1366 aa11.59□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 TmpoQ61033 693 aaKnown RBP11.59□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Klhdc4Q921I2 584 aa11.59□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 ChgaP26339 463 aaKnown RBP11.59□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Usp16Q99LG0 825 aa11.58□□□□□ -0.55
Ctnna1-201ENSMUST00000042345 Casz1Q9CWL2 1761 aa11.58□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 SkilQ60665 675 aa11.58□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Ccdc27Q3V036 639 aa11.57□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Rab11fip3Q8CHD8 1047 aa11.57□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Aldh8a1Q8BH00 487 aa11.57□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Wdr17E9Q271 1322 aa11.56□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Atf5O70191 283 aa11.56□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms