RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Wwc1Q5SXA9 1104 aa19.71■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Flad1Q8R123 492 aa19.71■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Tfip11Q9ERA6 838 aaKnown RBP19.71■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Nop14Q8R3N1 860 aaKnown RBP19.7■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Rufy1Q8BIJ7 712 aa19.7■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Neo1P97798 1493 aa19.7■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Pcf11G3X9Z4 1553 aa19.7■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Trim34bJ3QNR8 485 aa19.7■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 TchhA0A0B4J1F9 1599 aa19.7■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 GphnQ8BUV3 769 aaKnown RBP19.69■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 TnmdQ9EP64 317 aa19.69■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Krt85Q9Z2T6 507 aa19.69■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Cep57l1Q8VDS7 400 aa19.69■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Olfml1Q8BSH2 233 aa19.69■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 SynmQ70IV5 1561 aa19.69■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Fez1Q8K0X8 392 aa19.69■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Cdkn1cP49919 348 aa19.68■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Rfx7F8VPJ6 1459 aa19.68■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Top2bQ64511 1612 aa19.68■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Pnmal2G3X9N3 661 aa19.68■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Mns1Q61884 491 aa19.68■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Trim34aQ99PP6 485 aa19.68■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Atxn3Q9CVD2 355 aa19.68■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Q3UJC8 639 aa19.68■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Fsd1Q7TPM6 496 aa19.68■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Mlh3A0A1Y7VMP7 1443 aa19.67■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Ipo4Q8VI75 1082 aa19.67■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 TnikP83510 1323 aa19.67■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Gsdma2Q32M21 443 aa19.67■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Plekhm2Q80TQ5 1018 aa19.67■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Nap1l1P28656 391 aaKnown RBP19.67■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Ppp4r3bQ922R5 820 aa19.67■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Anp32eP97822 260 aaKnown RBP19.67■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Kif3cO35066 796 aa19.66■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Smc5Q8CG46 1101 aaKnown RBP19.66■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 SelenooQ9DBC0 667 aa19.66■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Gm1043A0A140LJC2 1431 aa19.66■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 HmmrQ00547 794 aaKnown RBP19.66■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Phf14Q9D4H9 881 aa19.66■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Caskin1Q6P9K8 1431 aa19.65■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Ncoa1P70365 1447 aa19.65■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Ppp6r1Q7TSI3 856 aa19.65■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Sel1lQ9Z2G6 790 aa19.65■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Tmco3Q8BH01 678 aa19.65■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Eif3bQ8JZQ9 803 aaKnown RBP19.65■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Kcnh5Q920E3 988 aa19.65■□□□□ 0.74
Ubfd1-201ENSMUST00000033158 Irgm2A0A140LIF8 407 aa19.64■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Prpf4bQ61136 1007 aaKnown RBP19.64■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Hs1bp3Q3TC93 395 aa19.64■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Erc1Q99MI1 1120 aa19.63■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Crocc2F6XLV1 1638 aa19.63■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Mctp1E9PV86 951 aa19.63■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Dhx8A2A4P0 1244 aaKnown RBP19.63■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Krt84Q99M73 603 aa19.63■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Prkar2bP31324 416 aa19.63■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Cdc45Q9Z1X9 566 aa19.63■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 ZgpatQ8VDM1 511 aa19.62■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Rapgef4Q9EQZ6 1011 aa19.62■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Mapk8ip1Q9WVI9 707 aa19.62■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Cct4P80315 539 aaKnown RBP19.62■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Sycp1Q62209 993 aa19.62■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Plcd4Q8K3R3 807 aa19.62■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Fkbp5Q64378 456 aa19.62■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Fsd2Q8BZ52 692 aa19.62■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Cdkl5Q3UTQ8 938 aa19.61■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Rprd2Q6NXI6 1469 aaKnown RBP19.61■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 NefhP19246 1090 aa19.61■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Dnajc2P54103 621 aaKnown RBP19.61■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Slc12a5Q91V14 1138 aa19.61■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Med4Q9CQA5 270 aa19.61■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Nup88Q8CEC0 753 aaKnown RBP19.6■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Brf1Q8CFK2 676 aa19.6■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Slc26a8Q8R0C3 999 aa19.6■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Naip5Q9R016 1403 aa19.6■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Wdr62Q3U3T8 1523 aa19.6■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Grin2aP35436 1464 aa19.6■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 DroshaQ5HZJ0 1373 aaKnown RBP19.6■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 ImmtQ8CAQ8 757 aaKnown RBP19.6■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Pip4k2aO70172 405 aa19.59■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Ankib1Q6ZPS6 1085 aa19.59■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Ppp1r42Q8R1Z4 357 aa19.59■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Smarca5Q91ZW3 1051 aaKnown RBP19.59■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Fam50bQ9WTJ8 334 aa19.59■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Pms1Q8K119 917 aa19.59■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Spty2d1Q68FG3 682 aa19.59■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Tango6Q8C3S2 1079 aa19.59■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Fam184aE9PW83 1143 aa19.59■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Ell2Q3UKU1 639 aa19.59■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Pmfbp1Q9WVQ0 1022 aa19.59■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Q3UPC7 1272 aa19.58■□□□□ 0.73
Ubfd1-201ENSMUST00000033158 Cfap58B2RW38 873 aa19.58■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Zscan20B2KFW1 1030 aa19.57■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 ApobrQ8VBT6 942 aa19.57■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Klf15Q9EPW2 415 aa19.57■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 IbspQ61711 324 aa19.57■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Fnbp4Q6ZQ03 1031 aa19.57■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Fam13aQ8BGI4 693 aa19.57■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Commd10Q8JZY2 202 aa19.57■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Kiaa0753Q6A000 959 aa19.56■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Mum1Q6DID5 682 aa19.56■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms