RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Ccne1Q61457 408 aa15.55■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 Cacna1sQ02789 1880 aa15.54■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 Uhrf1bp1lA2RSJ4 1457 aa15.53■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 Pak3Q61036 559 aa15.53■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 Trim28Q62318 834 aa15.53■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 Slc34a2Q9DBP0 697 aa15.53■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 P2rx7Q9Z1M0 595 aa15.53■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 Ptpn23Q6PB44 1692 aa15.53■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 Cald1E9QA15 768 aaKnown RBP15.52■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 Kiaa0319Q5SZV5 1081 aa15.52■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 Sugp2Q8CH09 1067 aa15.52■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 Ccdc6D3YZP9 469 aa15.51■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 4930523C07RikE9Q2T4 99 aa15.51■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Rad17Q6NXW6 688 aa15.51■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Ankrd23Q812A3 306 aa15.51■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Mast2Q60592 1734 aa15.51■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Taok3Q8BYC6 898 aa15.5■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Col22a1E9Q7P1 1613 aa15.5■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 GakQ99KY4 1305 aa15.49■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Ubap1lG3UW59 384 aa15.49■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Eif4a2P10630 407 aa15.49■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Zranb3Q6NZP1 1069 aa15.49■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Zpr1Q62384 459 aa15.48■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 TkfcQ8VC30 578 aa15.48■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Plekhd1B2RPU2 505 aa15.47■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Ildr2B5TVM2 661 aa15.47■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Vps33bP59016 617 aa15.47■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Eya1P97767 591 aa15.47■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 FocadA2AKG8 1798 aa15.47■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Ppp1r37Q8BKR5 712 aa15.46■□□□□ 0.07
Ccdc28b-201ENSMUST00000030586 Gm10471E9Q1C7 252 aa15.45■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Ppp1r15aP17564 657 aa15.45■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Sik1Q60670 779 aa15.45■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Ppp2r1aQ76MZ3 589 aa15.45■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Rsph6aQ8CDR2 708 aa15.45■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Slc12a5Q91V14 1138 aa15.45■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Tnks1bp1P58871 1720 aa15.45■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Mst1rQ62190 1378 aa15.44■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Ddb1Q3U1J4 1140 aaKnown RBP15.43■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Ppp6r1Q7TSI3 856 aa15.43■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Ginm1Q91WR6 327 aa15.43■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Akap11E9Q777 1895 aa15.43■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Ly75Q60767 1723 aa15.43■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Simc1E9Q6E9 1354 aa15.42■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Kcnh4A2A5F7 1018 aa15.42■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Wdr66E9Q743 1299 aa15.42■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Lrit1Q8K099 624 aa15.42■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Cc2d1aQ8K1A6 943 aa15.42■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Fam50bQ9WTJ8 334 aa15.42■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Nwd2Q6P5U7 1742 aa15.42■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 MpripP97434 1024 aa15.41■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Exoc5Q3TPX4 708 aa15.41■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Kdm6aO70546 1401 aa15.41■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Adgrb1Q3UHD1 1582 aa15.4■□□□□ 0.06
Ccdc28b-201ENSMUST00000030586 Adamtsl1Q8BLI0 1745 aa15.38■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 PnisrA2AJT4 805 aaKnown RBP15.38■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 Bsdc1Q80Y55 427 aa15.38■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 ThemisQ8BGW0 636 aa15.38■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 Rab3gap2Q8BMG7 1366 aa15.37■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 Erbb3Q61526 1339 aa15.37■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 Ppfibp2O35711 882 aa15.36■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 GalcP54818 684 aa15.36■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 Aplp2Q06335 707 aa15.36■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 Zcrb1Q9CZ96 217 aaKnown RBP15.36■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 Pnpla7A2AJ88 1352 aa15.36■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 Gm21680A0A0G2JGR8 267 aa15.35■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 Mcm10Q0VBD2 885 aa15.35■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 Larp1Q6ZQ58 1072 aaKnown RBP15.35■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 Parp14Q2EMV9 1817 aa15.35■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 PalmQ9Z0P4 383 aa15.34■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 Kat6bQ8BRB7 1872 aa15.33■□□□□ 0.05
Ccdc28b-201ENSMUST00000030586 Q7TT23 1179 aa15.33■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Plin1Q8CGN5 517 aa15.33■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Speer4bQ9D9F7 267 aa15.33■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Elp1Q7TT37 1333 aaKnown RBP15.33■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.32■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 4930572O03RikQ8C5Y0 211 aa15.32■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Tns2Q8CGB6 1400 aa15.31■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Ahnak2E9PYB0 1738 aaKnown RBP15.3■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 TnikP83510 1323 aa15.3■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Vars2Q3U2A8 1060 aa15.3■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Kiaa1107Q80TK0 1369 aa15.3■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Rpgrip1lQ8CG73 1264 aa15.3■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Arhgap33Q80YF9 1305 aa15.29■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Snapc4Q8BP86 1333 aa15.29■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Tsen2Q6P7W5 460 aa15.29■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Nlrp6Q91WS2 869 aa15.29■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Apba2P98084 750 aa15.28■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Afg3l2Q8JZQ2 802 aaKnown RBP15.28■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Arfgef2A2A5R2 1792 aa15.27■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Nkx2-3P97334 362 aa15.27■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Tcerg1Q8CGF7 1100 aaKnown RBP15.27■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 GsdmaQ9EST1 446 aa15.27■□□□□ 0.04
Ccdc28b-201ENSMUST00000030586 Wwc2Q6NXJ0 1187 aa15.26■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Phkg2Q9DB30 406 aa15.26■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Aox2Q5SGK3 1345 aa15.25■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Asic4Q7TNS7 539 aa15.25■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 OscarQ8VBT3 265 aa15.25■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 HypkQ9CR41 129 aa15.25■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 U2af1Q9D883 239 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms